RNA–Protein interactions for RNA: ENST00000539533.3

PCDHB17P-201, Transcript of protocadherin beta 17 pseudogene, humanhuman

BASIC

Gene PCDHB17P, Length 2,393 nt, Biotype transcribed unprocessed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB17P-201ENST00000539533 OR13A1Q8NGR1 328 aa14.18□□□□□ -0.14
PCDHB17P-201ENST00000539533 ITLN2Q8WWU7 325 aaPredicted RBP14.18□□□□□ -0.14
PCDHB17P-201ENST00000539533 SNX22Q96L94 193 aa14.18□□□□□ -0.14
PCDHB17P-201ENST00000539533 KCNIP1Q9NZI2 227 aa14.18□□□□□ -0.14
PCDHB17P-201ENST00000539533 ARFGEF3Q5TH69 2177 aa14.18□□□□□ -0.14
PCDHB17P-201ENST00000539533 CHST1O43916 411 aa14.17□□□□□ -0.14
PCDHB17P-201ENST00000539533 NXPH3O95157 252 aa14.17□□□□□ -0.14
PCDHB17P-201ENST00000539533 VDAC1P21796 283 aa14.17□□□□□ -0.14
PCDHB17P-201ENST00000539533 UCP1P25874 307 aa14.17□□□□□ -0.14
PCDHB17P-201ENST00000539533 EFNB3Q15768 340 aa14.17□□□□□ -0.14
PCDHB17P-201ENST00000539533 SLC35E3Q7Z769 313 aa14.17□□□□□ -0.14
PCDHB17P-201ENST00000539533 CMTM1Q8IZ96 169 aa14.17□□□□□ -0.14
PCDHB17P-201ENST00000539533 LURAP1Q96LR2 239 aa14.17□□□□□ -0.14
PCDHB17P-201ENST00000539533 HIPK2Q9H2X6 1198 aa14.17□□□□□ -0.14
PCDHB17P-201ENST00000539533 OOEPA6NGQ2 149 aa14.17□□□□□ -0.14
PCDHB17P-201ENST00000539533 B9A039 149 aa14.17□□□□□ -0.14
PCDHB17P-201ENST00000539533 HBE1P02100 147 aa14.17□□□□□ -0.14
PCDHB17P-201ENST00000539533 CEACAM6P40199 344 aa14.17□□□□□ -0.14
PCDHB17P-201ENST00000539533 RPL23AP62750 156 aaKnown RBP14.17□□□□□ -0.14
PCDHB17P-201ENST00000539533 ZNF672Q499Z4 452 aaPredicted RBP14.17□□□□□ -0.14
PCDHB17P-201ENST00000539533 STUMQ69YW2 141 aa14.17□□□□□ -0.14
PCDHB17P-201ENST00000539533 MISP3Q96FF7 219 aa14.17□□□□□ -0.14
PCDHB17P-201ENST00000539533 ATP5SQ99766 215 aa14.17□□□□□ -0.14
PCDHB17P-201ENST00000539533 MS4A5Q9H3V2 200 aa14.17□□□□□ -0.14
PCDHB17P-201ENST00000539533 HRNRQ86YZ3 2850 aaPredicted RBP14.17□□□□□ -0.14
PCDHB17P-201ENST00000539533 NPIPB11E5RHQ5 1161 aa14.16□□□□□ -0.14
PCDHB17P-201ENST00000539533 CLDN14O95500 239 aa14.16□□□□□ -0.14
PCDHB17P-201ENST00000539533 GYPAP02724 150 aa14.16□□□□□ -0.14
PCDHB17P-201ENST00000539533 CD81P60033 236 aa14.16□□□□□ -0.14
PCDHB17P-201ENST00000539533 SPCS3P61009 180 aa14.16□□□□□ -0.14
PCDHB17P-201ENST00000539533 DPPA3Q6W0C5 159 aa14.16□□□□□ -0.14
PCDHB17P-201ENST00000539533 MUC15Q8N387 334 aa14.16□□□□□ -0.14
PCDHB17P-201ENST00000539533 CCL17Q92583 94 aa14.16□□□□□ -0.14
PCDHB17P-201ENST00000539533 HBZP02008 142 aa14.16□□□□□ -0.14
PCDHB17P-201ENST00000539533 TRGC1P0CF51 173 aa14.16□□□□□ -0.14
PCDHB17P-201ENST00000539533 SSTR5P35346 364 aa14.16□□□□□ -0.14
PCDHB17P-201ENST00000539533 TAS2R30P59541 319 aa14.16□□□□□ -0.14
PCDHB17P-201ENST00000539533 CCL13Q99616 98 aa14.16□□□□□ -0.14
PCDHB17P-201ENST00000539533 C2orf88Q9BSF0 95 aa14.16□□□□□ -0.14
PCDHB17P-201ENST00000539533 TMEM204Q9BSN7 226 aa14.16□□□□□ -0.14
PCDHB17P-201ENST00000539533 RAI1Q7Z5J4 1906 aaPredicted RBP14.16□□□□□ -0.14
PCDHB17P-201ENST00000539533 LRRC30A6NM36 301 aa14.15□□□□□ -0.14
PCDHB17P-201ENST00000539533 MGST3O14880 152 aa14.15□□□□□ -0.14
PCDHB17P-201ENST00000539533 PAX9P55771 341 aa14.15□□□□□ -0.14
PCDHB17P-201ENST00000539533 PAX5Q02548 391 aa14.15□□□□□ -0.14
PCDHB17P-201ENST00000539533 OR52L2PQ8NGH6 319 aa14.15□□□□□ -0.14
PCDHB17P-201ENST00000539533 RFESDQ8TAC1 157 aa14.15□□□□□ -0.14
PCDHB17P-201ENST00000539533 PPP1R35Q8TAP8 253 aa14.15□□□□□ -0.14
PCDHB17P-201ENST00000539533 GALMQ96C23 342 aa14.15□□□□□ -0.14
PCDHB17P-201ENST00000539533 TNFSF12O43508 249 aa14.15□□□□□ -0.14
PCDHB17P-201ENST00000539533 IL2RGP31785 369 aa14.15□□□□□ -0.14
PCDHB17P-201ENST00000539533 TEX36Q5VZQ5 186 aa14.15□□□□□ -0.14
PCDHB17P-201ENST00000539533 OR10V1Q8NGI7 309 aa14.15□□□□□ -0.14
PCDHB17P-201ENST00000539533 OR5D13Q8NGL4 314 aa14.15□□□□□ -0.14
PCDHB17P-201ENST00000539533 FRZBQ92765 325 aa14.15□□□□□ -0.14
PCDHB17P-201ENST00000539533 SDSLQ96GA7 329 aa14.15□□□□□ -0.14
PCDHB17P-201ENST00000539533 GAFA1Q96PS6 74 aa14.15□□□□□ -0.14
PCDHB17P-201ENST00000539533 ZFYVE26Q68DK2 2539 aa14.14□□□□□ -0.15
PCDHB17P-201ENST00000539533 LOC102723971A0A1B0GUV8 181 aa14.14□□□□□ -0.15
PCDHB17P-201ENST00000539533 ODAMA1E959 279 aa14.14□□□□□ -0.15
PCDHB17P-201ENST00000539533 EDDM3BP56851 147 aa14.14□□□□□ -0.15
PCDHB17P-201ENST00000539533 OR10G4Q8NGN3 311 aa14.14□□□□□ -0.15
PCDHB17P-201ENST00000539533 OR13D1Q8NGV5 346 aa14.14□□□□□ -0.15
PCDHB17P-201ENST00000539533 PACRGQ96M98 296 aaPredicted RBP14.14□□□□□ -0.15
PCDHB17P-201ENST00000539533 DCHS2Q6V1P9 2916 aa14.14□□□□□ -0.15
PCDHB17P-201ENST00000539533 H0Y980 276 aa14.14□□□□□ -0.15
PCDHB17P-201ENST00000539533 TMEM178BH3BS89 294 aa14.14□□□□□ -0.15
PCDHB17P-201ENST00000539533 USF2Q15853 346 aaPredicted RBP14.14□□□□□ -0.15
PCDHB17P-201ENST00000539533 ZNF788Q6ZQV5 615 aa14.14□□□□□ -0.15
PCDHB17P-201ENST00000539533 ZNF808Q8N4W9 903 aaPredicted RBP14.14□□□□□ -0.15
PCDHB17P-201ENST00000539533 FAM216BQ8N7L0 139 aa14.14□□□□□ -0.15
PCDHB17P-201ENST00000539533 ABHD5Q8WTS1 349 aa14.14□□□□□ -0.15
PCDHB17P-201ENST00000539533 IL22RA2Q969J5 263 aa14.14□□□□□ -0.15
PCDHB17P-201ENST00000539533 TRAV1-1A0A0B4J248 108 aa14.13□□□□□ -0.15
PCDHB17P-201ENST00000539533 DFFBO76075 338 aa14.13□□□□□ -0.15
PCDHB17P-201ENST00000539533 IGLV2-14P01704 120 aa14.13□□□□□ -0.15
PCDHB17P-201ENST00000539533 THNSL2Q86YJ6 484 aa14.13□□□□□ -0.15
PCDHB17P-201ENST00000539533 TGIF2LXQ8IUE1 241 aa14.13□□□□□ -0.15
PCDHB17P-201ENST00000539533 FGFRL1Q8N441 504 aa14.13□□□□□ -0.15
PCDHB17P-201ENST00000539533 ZNF665Q9H7R5 613 aa14.13□□□□□ -0.15
PCDHB17P-201ENST00000539533 TMEM106BQ9NUM4 274 aa14.13□□□□□ -0.15
PCDHB17P-201ENST00000539533 GNG13Q9P2W3 67 aa14.13□□□□□ -0.15
PCDHB17P-201ENST00000539533 RBM7Q9Y580 266 aaKnown RBP14.13□□□□□ -0.15
PCDHB17P-201ENST00000539533 IGHV3-43A0A0B4J1X8 118 aa14.12□□□□□ -0.15
PCDHB17P-201ENST00000539533 SMCO3A2RU48 225 aa14.12□□□□□ -0.15
PCDHB17P-201ENST00000539533 B4DEV8 164 aa14.12□□□□□ -0.15
PCDHB17P-201ENST00000539533 C15orf65H3BRN8 121 aa14.12□□□□□ -0.15
PCDHB17P-201ENST00000539533 PGLYRP1O75594 196 aaPredicted RBP14.12□□□□□ -0.15
PCDHB17P-201ENST00000539533 IGHV3-43DP0DP04 118 aa14.12□□□□□ -0.15
PCDHB17P-201ENST00000539533 LBHQ53QV2 105 aaPredicted RBP14.12□□□□□ -0.15
PCDHB17P-201ENST00000539533 H3BP45 60 aa14.12□□□□□ -0.15
PCDHB17P-201ENST00000539533 PHOX2AO14813 284 aa14.12□□□□□ -0.15
PCDHB17P-201ENST00000539533 TCAPO15273 167 aa14.12□□□□□ -0.15
PCDHB17P-201ENST00000539533 PRB1P04280 392 aa14.12□□□□□ -0.15
PCDHB17P-201ENST00000539533 OR5R1Q8NH85 324 aa14.12□□□□□ -0.15
PCDHB17P-201ENST00000539533 PPIAL4EA0A075B759 164 aa14.11□□□□□ -0.15
PCDHB17P-201ENST00000539533 A0A0G2JRQ6 117 aa14.11□□□□□ -0.15
PCDHB17P-201ENST00000539533 PPIAL4DF5H284 164 aa14.11□□□□□ -0.15
PCDHB17P-201ENST00000539533 C19orf84I3L1E1 186 aa14.11□□□□□ -0.15
PCDHB17P-201ENST00000539533 TMPRSS2O15393 492 aa14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms