RNA–Protein interactions for RNA: ENST00000537706.5

USP28-205, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 1 (best) BASIC

Gene USP28, Length 1,900 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-205ENST00000537706 OR6F1Q8NGZ6 308 aa6.81□□□□□ -1.32
USP28-205ENST00000537706 UBALD1Q8TB05 177 aa6.81□□□□□ -1.32
USP28-205ENST00000537706 C15orf40Q8WUR7 153 aa6.81□□□□□ -1.32
USP28-205ENST00000537706 MARVELD1Q9BSK0 173 aa6.81□□□□□ -1.32
USP28-205ENST00000537706 ZNF221Q9UK13 617 aa6.81□□□□□ -1.32
USP28-205ENST00000537706 IGHV4-4A0A075B6R2 117 aa6.8□□□□□ -1.32
USP28-205ENST00000537706 IGKV1-27A0A075B6S5 117 aa6.8□□□□□ -1.32
USP28-205ENST00000537706 HMX3A6NHT5 357 aa6.8□□□□□ -1.32
USP28-205ENST00000537706 CENPXA8MT69 81 aa6.8□□□□□ -1.32
USP28-205ENST00000537706 SLC17A2O00624 439 aa6.8□□□□□ -1.32
USP28-205ENST00000537706 TTRP02766 147 aa6.8□□□□□ -1.32
USP28-205ENST00000537706 MAS1P04201 325 aa6.8□□□□□ -1.32
USP28-205ENST00000537706 HLA-DMAP28067 261 aa6.8□□□□□ -1.32
USP28-205ENST00000537706 BTCP35070 178 aa6.8□□□□□ -1.32
USP28-205ENST00000537706 MTCP1P56278 107 aa6.8□□□□□ -1.32
USP28-205ENST00000537706 TMEM244Q5VVB8 128 aa6.8□□□□□ -1.32
USP28-205ENST00000537706 TOMM5Q8N4H5 51 aa6.8□□□□□ -1.32
USP28-205ENST00000537706 ZBTB8BQ8NAP8 495 aaPredicted RBP6.8□□□□□ -1.32
USP28-205ENST00000537706 BVESQ8NE79 360 aa6.8□□□□□ -1.32
USP28-205ENST00000537706 RARRES2Q99969 163 aa6.8□□□□□ -1.32
USP28-205ENST00000537706 OR52A1Q9UKL2 312 aa6.8□□□□□ -1.32
USP28-205ENST00000537706 DNAH17Q9UFH2 4485 aa6.8□□□□□ -1.32
USP28-205ENST00000537706 IFNA10P01566 189 aa6.8□□□□□ -1.32
USP28-205ENST00000537706 IGFBP3P17936 291 aaPredicted RBP6.8□□□□□ -1.32
USP28-205ENST00000537706 PRKACBP22694 351 aa6.8□□□□□ -1.32
USP28-205ENST00000537706 SSTR5P35346 364 aa6.8□□□□□ -1.32
USP28-205ENST00000537706 ZNF137PP52743 207 aa6.8□□□□□ -1.32
USP28-205ENST00000537706 CLDN12P56749 244 aa6.8□□□□□ -1.32
USP28-205ENST00000537706 NDPQ00604 133 aa6.8□□□□□ -1.32
USP28-205ENST00000537706 KLF9Q13886 244 aaPredicted RBP6.8□□□□□ -1.32
USP28-205ENST00000537706 UBE2V2Q15819 145 aa6.8□□□□□ -1.32
USP28-205ENST00000537706 RAB11BQ15907 218 aa6.8□□□□□ -1.32
USP28-205ENST00000537706 TMEM69Q5SWH9 247 aa6.8□□□□□ -1.32
USP28-205ENST00000537706 ATAD3CQ5T2N8 411 aa6.8□□□□□ -1.32
USP28-205ENST00000537706 UBE2DNLQ8IWF7 75 aa6.8□□□□□ -1.32
USP28-205ENST00000537706 ELMOD2Q8IZ81 293 aa6.8□□□□□ -1.32
USP28-205ENST00000537706 NKAIN3Q8N8D7 197 aa6.8□□□□□ -1.32
USP28-205ENST00000537706 LFNGQ8NES3 379 aa6.8□□□□□ -1.32
USP28-205ENST00000537706 OR13C3Q8NGS6 347 aa6.8□□□□□ -1.32
USP28-205ENST00000537706 S100A16Q96FQ6 103 aaKnown RBP6.8□□□□□ -1.32
USP28-205ENST00000537706 USMG5Q96IX5 58 aa6.8□□□□□ -1.32
USP28-205ENST00000537706 AUNIPQ9H7T9 357 aa6.8□□□□□ -1.32
USP28-205ENST00000537706 NEK6Q9HC98 313 aa6.8□□□□□ -1.32
USP28-205ENST00000537706 GFOD1Q9NXC2 390 aa6.8□□□□□ -1.32
USP28-205ENST00000537706 COPZ2Q9P299 210 aa6.8□□□□□ -1.32
USP28-205ENST00000537706 TRAV10A0A0B4J240 114 aa6.79□□□□□ -1.32
USP28-205ENST00000537706 GABARAPH6UMI1 98 aa6.79□□□□□ -1.32
USP28-205ENST00000537706 HSPB6O14558 160 aa6.79□□□□□ -1.32
USP28-205ENST00000537706 NDUFA3O95167 84 aa6.79□□□□□ -1.32
USP28-205ENST00000537706 CD3GP09693 182 aa6.79□□□□□ -1.32
USP28-205ENST00000537706 CD37P11049 281 aa6.79□□□□□ -1.32
USP28-205ENST00000537706 AP3S2P59780 193 aa6.79□□□□□ -1.32
USP28-205ENST00000537706 CBX3Q13185 183 aa6.79□□□□□ -1.32
USP28-205ENST00000537706 GLT8D1Q68CQ7 371 aa6.79□□□□□ -1.32
USP28-205ENST00000537706 Q6P435 159 aa6.79□□□□□ -1.32
USP28-205ENST00000537706 SYT8Q8NBV8 401 aa6.79□□□□□ -1.32
USP28-205ENST00000537706 ST6GAL2Q96JF0 529 aa6.79□□□□□ -1.32
USP28-205ENST00000537706 RNF126Q9BV68 326 aa6.79□□□□□ -1.32
USP28-205ENST00000537706 CHST5Q9GZS9 411 aa6.79□□□□□ -1.32
USP28-205ENST00000537706 TAS2R4Q9NYW5 299 aa6.79□□□□□ -1.32
USP28-205ENST00000537706 MRPS7Q9Y2R9 242 aaKnown RBP6.79□□□□□ -1.32
USP28-205ENST00000537706 RBMX2Q9Y388 322 aaKnown RBP6.79□□□□□ -1.32
USP28-205ENST00000537706 ALG5Q9Y673 324 aa6.79□□□□□ -1.32
USP28-205ENST00000537706 FAT2Q9NYQ8 4349 aa6.79□□□□□ -1.32
USP28-205ENST00000537706 INMT-MINDY4F8WBC2 141 aa6.78□□□□□ -1.32
USP28-205ENST00000537706 KDM4BO94953 1096 aa6.78□□□□□ -1.32
USP28-205ENST00000537706 IFNA21P01568 189 aa6.78□□□□□ -1.32
USP28-205ENST00000537706 IFNA17P01571 189 aa6.78□□□□□ -1.32
USP28-205ENST00000537706 SCTP09683 121 aa6.78□□□□□ -1.32
USP28-205ENST00000537706 PDZK1IP1Q13113 114 aa6.78□□□□□ -1.32
USP28-205ENST00000537706 TMEM30BQ3MIR4 351 aa6.78□□□□□ -1.32
USP28-205ENST00000537706 TM4SF20Q53R12 229 aa6.78□□□□□ -1.32
USP28-205ENST00000537706 RNASE12Q5GAN4 147 aaKnown RBP6.78□□□□□ -1.32
USP28-205ENST00000537706 ZNF343Q6P1L6 599 aa6.78□□□□□ -1.32
USP28-205ENST00000537706 OR6M1Q8NGM8 313 aa6.78□□□□□ -1.32
USP28-205ENST00000537706 DEDD2Q8WXF8 326 aa6.78□□□□□ -1.32
USP28-205ENST00000537706 ARL11Q969Q4 196 aa6.78□□□□□ -1.32
USP28-205ENST00000537706 C10orf35Q96D05 121 aa6.78□□□□□ -1.32
USP28-205ENST00000537706 GNG12Q9UBI6 72 aa6.78□□□□□ -1.32
USP28-205ENST00000537706 NAP1L6A6NFF2 107 aa6.78□□□□□ -1.32
USP28-205ENST00000537706 LGALS9O00182 355 aa6.78□□□□□ -1.32
USP28-205ENST00000537706 RRHO14718 337 aa6.78□□□□□ -1.32
USP28-205ENST00000537706 SYT7O43581 403 aa6.78□□□□□ -1.32
USP28-205ENST00000537706 FOLR2P14207 255 aa6.78□□□□□ -1.32
USP28-205ENST00000537706 TAS2R20P59543 309 aa6.78□□□□□ -1.32
USP28-205ENST00000537706 FCAMRQ8WWV6 532 aa6.78□□□□□ -1.32
USP28-205ENST00000537706 PP6455Q8WZ26 134 aa6.78□□□□□ -1.32
USP28-205ENST00000537706 FAM3DQ96BQ1 224 aa6.78□□□□□ -1.32
USP28-205ENST00000537706 FAM103A1Q9BTL3 118 aaKnown RBP6.78□□□□□ -1.32
USP28-205ENST00000537706 FBXL15Q9H469 300 aa6.78□□□□□ -1.32
USP28-205ENST00000537706 NUDT15Q9NV35 164 aa6.78□□□□□ -1.32
USP28-205ENST00000537706 A0A1B0GTI1 187 aa6.77□□□□□ -1.33
USP28-205ENST00000537706 C7orf66A4D0T2 115 aa6.77□□□□□ -1.33
USP28-205ENST00000537706 GSTT2BP0CG30 244 aa6.77□□□□□ -1.33
USP28-205ENST00000537706 HTR2CP28335 458 aa6.77□□□□□ -1.33
USP28-205ENST00000537706 LGALS7P47929 136 aa6.77□□□□□ -1.33
USP28-205ENST00000537706 RRAS2P62070 204 aaPredicted RBP6.77□□□□□ -1.33
USP28-205ENST00000537706 ZFP69Q49AA0 526 aa6.77□□□□□ -1.33
USP28-205ENST00000537706 FAM209BQ5JX69 171 aa6.77□□□□□ -1.33
USP28-205ENST00000537706 Q6ZSR3 168 aa6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms