RNA–Protein interactions for RNA: ENST00000533756.5

PACS1-213, Transcript of phosphofurin acidic cluster sorting protein 1, humanhuman

TSL 4

Gene PACS1, Length 578 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACS1-213ENST00000533756 DKK2Q9UBU2 259 aa6.23□□□□□ -1.41
PACS1-213ENST00000533756 SRRM4A7MD48 611 aaKnown RBP6.22□□□□□ -1.41
PACS1-213ENST00000533756 ZNF780AO75290 641 aaPredicted RBP6.22□□□□□ -1.41
PACS1-213ENST00000533756 ACTL6BO94805 426 aa6.22□□□□□ -1.41
PACS1-213ENST00000533756 CDRT1O95170 752 aa6.22□□□□□ -1.41
PACS1-213ENST00000533756 DHFRP00374 187 aa6.22□□□□□ -1.41
PACS1-213ENST00000533756 GLAP06280 429 aa6.22□□□□□ -1.41
PACS1-213ENST00000533756 RPA2P15927 270 aa6.22□□□□□ -1.41
PACS1-213ENST00000533756 DEFB131AP59861 70 aa6.22□□□□□ -1.41
PACS1-213ENST00000533756 UBE2KP61086 200 aa6.22□□□□□ -1.41
PACS1-213ENST00000533756 PPP1R8Q12972 351 aaKnown RBP6.22□□□□□ -1.41
PACS1-213ENST00000533756 VMA21Q3ZAQ7 101 aa6.22□□□□□ -1.41
PACS1-213ENST00000533756 FAM98BQ52LJ0 330 aaKnown RBP6.22□□□□□ -1.41
PACS1-213ENST00000533756 RNASE12Q5GAN4 147 aaKnown RBP6.22□□□□□ -1.41
PACS1-213ENST00000533756 RAB12Q6IQ22 244 aa6.22□□□□□ -1.41
PACS1-213ENST00000533756 Q6ZRN7 208 aaPredicted RBP6.22□□□□□ -1.41
PACS1-213ENST00000533756 OR2G2Q8NGZ5 317 aa6.22□□□□□ -1.41
PACS1-213ENST00000533756 CMTM3Q96MX0 182 aa6.22□□□□□ -1.41
PACS1-213ENST00000533756 FYTTD1Q96QD9 318 aaKnown RBP6.22□□□□□ -1.41
PACS1-213ENST00000533756 NEU1Q99519 415 aa6.22□□□□□ -1.41
PACS1-213ENST00000533756 MAGT1Q9H0U3 335 aa6.22□□□□□ -1.41
PACS1-213ENST00000533756 FNDC4Q9H6D8 234 aaPredicted RBP6.22□□□□□ -1.41
PACS1-213ENST00000533756 CLEC5AQ9NY25 188 aa6.22□□□□□ -1.41
PACS1-213ENST00000533756 ABRACLQ9P1F3 81 aa6.22□□□□□ -1.41
PACS1-213ENST00000533756 ABCD2Q9UBJ2 740 aa6.22□□□□□ -1.41
PACS1-213ENST00000533756 SMPXQ9UHP9 88 aa6.22□□□□□ -1.41
PACS1-213ENST00000533756 PUS1Q9Y606 427 aaKnown RBP eCLIP6.22□□□□□ -1.41
PACS1-213ENST00000533756 A0A0G2JND7 137 aa6.21□□□□□ -1.42
PACS1-213ENST00000533756 TMEM238LA0A1B0GVL6 79 aa6.21□□□□□ -1.42
PACS1-213ENST00000533756 SMIM9A6NGZ8 99 aa6.21□□□□□ -1.42
PACS1-213ENST00000533756 NDUFA4O00483 81 aa6.21□□□□□ -1.42
PACS1-213ENST00000533756 CREBL2O60519 120 aaPredicted RBP6.21□□□□□ -1.42
PACS1-213ENST00000533756 CD5P06127 495 aa6.21□□□□□ -1.42
PACS1-213ENST00000533756 CRYGCP07315 174 aa6.21□□□□□ -1.42
PACS1-213ENST00000533756 OR2T7P0C7T2 308 aa6.21□□□□□ -1.42
PACS1-213ENST00000533756 GTF2F2P13984 249 aa6.21□□□□□ -1.42
PACS1-213ENST00000533756 RAB6AP20340 208 aa6.21□□□□□ -1.42
PACS1-213ENST00000533756 GPR183P32249 361 aa6.21□□□□□ -1.42
PACS1-213ENST00000533756 MAGOHP61326 146 aaKnown RBP6.21□□□□□ -1.42
PACS1-213ENST00000533756 VSNL1P62760 191 aa6.21□□□□□ -1.42
PACS1-213ENST00000533756 TAGLNQ01995 201 aaKnown RBP6.21□□□□□ -1.42
PACS1-213ENST00000533756 HMGN3Q15651 99 aa6.21□□□□□ -1.42
PACS1-213ENST00000533756 FAM90A2PQ658T7 463 aa6.21□□□□□ -1.42
PACS1-213ENST00000533756 GSG1LQ6UXU4 331 aa6.21□□□□□ -1.42
PACS1-213ENST00000533756 CEACAM19Q7Z692 300 aa6.21□□□□□ -1.42
PACS1-213ENST00000533756 PARP16Q8N5Y8 322 aa6.21□□□□□ -1.42
PACS1-213ENST00000533756 OR10G2Q8NGC3 310 aa6.21□□□□□ -1.42
PACS1-213ENST00000533756 OR51A4Q8NGJ6 313 aa6.21□□□□□ -1.42
PACS1-213ENST00000533756 IL1F10Q8WWZ1 152 aa6.21□□□□□ -1.42
PACS1-213ENST00000533756 FEVQ99581 238 aa6.21□□□□□ -1.42
PACS1-213ENST00000533756 S100A13Q99584 98 aa6.21□□□□□ -1.42
PACS1-213ENST00000533756 VCX3BQ9H321 246 aa6.21□□□□□ -1.42
PACS1-213ENST00000533756 SAR1AQ9NR31 198 aa6.21□□□□□ -1.42
PACS1-213ENST00000533756 H2AFY2Q9P0M6 372 aaPredicted RBP6.21□□□□□ -1.42
PACS1-213ENST00000533756 PAIP2BQ9ULR5 123 aaKnown RBP6.21□□□□□ -1.42
PACS1-213ENST00000533756 PEX16Q9Y5Y5 336 aa6.21□□□□□ -1.42
PACS1-213ENST00000533756 DNAH8Q96JB1 4490 aa6.21□□□□□ -1.42
PACS1-213ENST00000533756 IGKV3-7A0A075B6H7 116 aa6.2□□□□□ -1.42
PACS1-213ENST00000533756 A0A1W2PQL4 384 aaPredicted RBP6.2□□□□□ -1.42
PACS1-213ENST00000533756 DPPA5A6NC42 116 aa6.2□□□□□ -1.42
PACS1-213ENST00000533756 C15orf62A8K5M9 175 aa6.2□□□□□ -1.42
PACS1-213ENST00000533756 CHEK1O14757 476 aa6.2□□□□□ -1.42
PACS1-213ENST00000533756 PAX4O43316 350 aa6.2□□□□□ -1.42
PACS1-213ENST00000533756 OSMP13725 252 aa6.2□□□□□ -1.42
PACS1-213ENST00000533756 RAB3AP20336 220 aa6.2□□□□□ -1.42
PACS1-213ENST00000533756 SERPINA2P20848 420 aa6.2□□□□□ -1.42
PACS1-213ENST00000533756 GNRHRP30968 328 aa6.2□□□□□ -1.42
PACS1-213ENST00000533756 CCR9P51686 369 aa6.2□□□□□ -1.42
PACS1-213ENST00000533756 EMP1P54849 157 aa6.2□□□□□ -1.42
PACS1-213ENST00000533756 CBX3Q13185 183 aa6.2□□□□□ -1.42
PACS1-213ENST00000533756 C4orf46Q504U0 113 aa6.2□□□□□ -1.42
PACS1-213ENST00000533756 FAM222AQ5U5X8 452 aa6.2□□□□□ -1.42
PACS1-213ENST00000533756 NXNL2Q5VZ03 156 aa6.2□□□□□ -1.42
PACS1-213ENST00000533756 LPCAT4Q643R3 524 aa6.2□□□□□ -1.42
PACS1-213ENST00000533756 SSX7Q7RTT5 188 aa6.2□□□□□ -1.42
PACS1-213ENST00000533756 FAM220AQ7Z4H9 259 aa6.2□□□□□ -1.42
PACS1-213ENST00000533756 MMD2Q8IY49 270 aa6.2□□□□□ -1.42
PACS1-213ENST00000533756 GBGT1Q8N5D6 347 aa6.2□□□□□ -1.42
PACS1-213ENST00000533756 OR51A2Q8NGJ7 313 aa6.2□□□□□ -1.42
PACS1-213ENST00000533756 ZNF502Q8TBZ5 544 aa6.2□□□□□ -1.42
PACS1-213ENST00000533756 MRPL30Q8TCC3 161 aaKnown RBP6.2□□□□□ -1.42
PACS1-213ENST00000533756 NSL1Q96IY1 281 aa6.2□□□□□ -1.42
PACS1-213ENST00000533756 OR14A2Q96R54 314 aa6.2□□□□□ -1.42
PACS1-213ENST00000533756 TBX5Q99593 518 aa6.2□□□□□ -1.42
PACS1-213ENST00000533756 RHPN1-AS1Q9BWJ2 59 aa6.2□□□□□ -1.42
PACS1-213ENST00000533756 C1QTNF4Q9BXJ3 329 aa6.2□□□□□ -1.42
PACS1-213ENST00000533756 C11orf54Q9H0W9 315 aaPredicted RBP6.2□□□□□ -1.42
PACS1-213ENST00000533756 ZNF430Q9H8G1 570 aaPredicted RBP6.2□□□□□ -1.42
PACS1-213ENST00000533756 REEP1Q9H902 201 aa6.2□□□□□ -1.42
PACS1-213ENST00000533756 TVP23BQ9NYZ1 205 aa6.2□□□□□ -1.42
PACS1-213ENST00000533756 SAMHD1Q9Y3Z3 626 aaKnown RBP6.2□□□□□ -1.42
PACS1-213ENST00000533756 TRAV2A0A0B4J234 112 aa6.19□□□□□ -1.42
PACS1-213ENST00000533756 IGHV7-4-1A0A0J9YVY3 117 aa6.19□□□□□ -1.42
PACS1-213ENST00000533756 MFSD2BA6NFX1 497 aa6.19□□□□□ -1.42
PACS1-213ENST00000533756 HMX3A6NHT5 357 aa6.19□□□□□ -1.42
PACS1-213ENST00000533756 FAM25EA8MYX2 175 aa6.19□□□□□ -1.42
PACS1-213ENST00000533756 TEX22C9J3V5 150 aa6.19□□□□□ -1.42
PACS1-213ENST00000533756 GAS8-AS1O95177 125 aa6.19□□□□□ -1.42
PACS1-213ENST00000533756 RPSAP08865 295 aaKnown RBP6.19□□□□□ -1.42
PACS1-213ENST00000533756 RRASP10301 218 aa6.19□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 137.2 ms