RNA–Protein interactions for RNA: ENST00000533018.1

PCF11-206, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 3

Gene PCF11, Length 580 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-206ENST00000533018 RHOGP84095 191 aa13.58□□□□□ -0.24
PCF11-206ENST00000533018 ATP5G2Q06055 141 aa13.58□□□□□ -0.24
PCF11-206ENST00000533018 CDK10Q15131 360 aa13.58□□□□□ -0.24
PCF11-206ENST00000533018 LCN12Q6JVE5 192 aa13.58□□□□□ -0.24
PCF11-206ENST00000533018 NUDCD2Q8WVJ2 157 aa13.58□□□□□ -0.24
PCF11-206ENST00000533018 CITED4Q96RK1 184 aa13.58□□□□□ -0.24
PCF11-206ENST00000533018 SPIN2AQ99865 258 aa13.58□□□□□ -0.24
PCF11-206ENST00000533018 SPIN2BQ9BPZ2 258 aa13.58□□□□□ -0.24
PCF11-206ENST00000533018 TM2D3Q9BRN9 247 aa13.58□□□□□ -0.24
PCF11-206ENST00000533018 TUBA4BQ9H853 241 aa13.58□□□□□ -0.24
PCF11-206ENST00000533018 AKIP1Q9NQ31 210 aa13.58□□□□□ -0.24
PCF11-206ENST00000533018 C19orf73Q9NVV2 129 aa13.58□□□□□ -0.24
PCF11-206ENST00000533018 PEMTQ9UBM1 199 aa13.58□□□□□ -0.24
PCF11-206ENST00000533018 DAPK2Q9UIK4 370 aa13.58□□□□□ -0.24
PCF11-206ENST00000533018 RAB26Q9ULW5 256 aa13.58□□□□□ -0.24
PCF11-206ENST00000533018 MRPS7Q9Y2R9 242 aaKnown RBP13.58□□□□□ -0.24
PCF11-206ENST00000533018 OR2W1Q9Y3N9 320 aa13.58□□□□□ -0.24
PCF11-206ENST00000533018 RBMXL2O75526 392 aaKnown RBP13.57□□□□□ -0.24
PCF11-206ENST00000533018 CSN3P07498 182 aa13.57□□□□□ -0.24
PCF11-206ENST00000533018 GNG2P59768 71 aa13.57□□□□□ -0.24
PCF11-206ENST00000533018 GABARAPL2P60520 117 aa13.57□□□□□ -0.24
PCF11-206ENST00000533018 EXOSC2Q13868 293 aaKnown RBP13.57□□□□□ -0.24
PCF11-206ENST00000533018 ZFAND6Q6FIF0 208 aa13.57□□□□□ -0.24
PCF11-206ENST00000533018 MMD2Q8IY49 270 aa13.57□□□□□ -0.24
PCF11-206ENST00000533018 DCSTAMPQ9H295 470 aa13.57□□□□□ -0.24
PCF11-206ENST00000533018 TXNL4BQ9NX01 149 aaKnown RBP13.57□□□□□ -0.24
PCF11-206ENST00000533018 SPATA2Q9UM82 520 aa13.57□□□□□ -0.24
PCF11-206ENST00000533018 TENM2Q9NT68 2774 aa13.57□□□□□ -0.24
PCF11-206ENST00000533018 DYNC2H1Q8NCM8 4307 aaKnown RBP13.57□□□□□ -0.24
PCF11-206ENST00000533018 TMEM235A6NFC5 223 aa13.56□□□□□ -0.24
PCF11-206ENST00000533018 FAM223BA6NKX1 122 aa13.56□□□□□ -0.24
PCF11-206ENST00000533018 A8MZ25 164 aa13.56□□□□□ -0.24
PCF11-206ENST00000533018 SLC22A5O76082 557 aa13.56□□□□□ -0.24
PCF11-206ENST00000533018 OR2A4O95047 310 aa13.56□□□□□ -0.24
PCF11-206ENST00000533018 HLA-DQB1P01920 261 aa13.56□□□□□ -0.24
PCF11-206ENST00000533018 C10orf55Q5SWW7 151 aa13.56□□□□□ -0.24
PCF11-206ENST00000533018 FAM223AQ8IWN6 122 aa13.56□□□□□ -0.24
PCF11-206ENST00000533018 VKORC1L1Q8N0U8 176 aa13.56□□□□□ -0.24
PCF11-206ENST00000533018 Q8N402 240 aa13.56□□□□□ -0.24
PCF11-206ENST00000533018 TCTEX1D2Q8WW35 142 aa13.56□□□□□ -0.24
PCF11-206ENST00000533018 SSR3Q9UNL2 185 aa13.56□□□□□ -0.24
PCF11-206ENST00000533018 RBMX2Q9Y388 322 aaKnown RBP13.56□□□□□ -0.24
PCF11-206ENST00000533018 RRP15Q9Y3B9 282 aaKnown RBP13.56□□□□□ -0.24
PCF11-206ENST00000533018 DPPA5A6NC42 116 aa13.55□□□□□ -0.24
PCF11-206ENST00000533018 MRPS14O60783 128 aaKnown RBP13.55□□□□□ -0.24
PCF11-206ENST00000533018 SCGNO76038 276 aa13.55□□□□□ -0.24
PCF11-206ENST00000533018 RPL30P62888 115 aaKnown RBP13.55□□□□□ -0.24
PCF11-206ENST00000533018 UBE2UQ5VVX9 321 aa13.55□□□□□ -0.24
PCF11-206ENST00000533018 CNIH2Q6PI25 160 aa13.55□□□□□ -0.24
PCF11-206ENST00000533018 SLC25A42Q86VD7 318 aa13.55□□□□□ -0.24
PCF11-206ENST00000533018 TPRA1Q86W33 373 aa13.55□□□□□ -0.24
PCF11-206ENST00000533018 SPARTQ8N0X7 666 aa13.55□□□□□ -0.24
PCF11-206ENST00000533018 TTC9CQ8N5M4 171 aa13.55□□□□□ -0.24
PCF11-206ENST00000533018 ISOC1Q96CN7 298 aa13.55□□□□□ -0.24
PCF11-206ENST00000533018 SPATA25Q9BR10 227 aa13.55□□□□□ -0.24
PCF11-206ENST00000533018 OR51E2Q9H255 320 aa13.55□□□□□ -0.24
PCF11-206ENST00000533018 CSMD3Q7Z407 3707 aa13.55□□□□□ -0.24
PCF11-206ENST00000533018 SACSQ9NZJ4 4579 aa13.54□□□□□ -0.24
PCF11-206ENST00000533018 STARD9Q9P2P6 4700 aa13.54□□□□□ -0.24
PCF11-206ENST00000533018 IGKV1D-13A0A0B4J2D9 117 aa13.54□□□□□ -0.24
PCF11-206ENST00000533018 IZUMO1RA6ND01 250 aa13.54□□□□□ -0.24
PCF11-206ENST00000533018 HMX3A6NHT5 357 aa13.54□□□□□ -0.24
PCF11-206ENST00000533018 BMPR1BO00238 502 aa13.54□□□□□ -0.24
PCF11-206ENST00000533018 OR2J3O76001 311 aa13.54□□□□□ -0.24
PCF11-206ENST00000533018 IGKV1-13P0DP09 117 aa13.54□□□□□ -0.24
PCF11-206ENST00000533018 FGF9P31371 208 aaPredicted RBP13.54□□□□□ -0.24
PCF11-206ENST00000533018 ZNF45Q02386 682 aa13.54□□□□□ -0.24
PCF11-206ENST00000533018 C15orf32Q32M92 178 aa13.54□□□□□ -0.24
PCF11-206ENST00000533018 NECAP1Q8NC96 275 aa13.54□□□□□ -0.24
PCF11-206ENST00000533018 OR4S2Q8NH73 311 aa13.54□□□□□ -0.24
PCF11-206ENST00000533018 VSTM2AQ8TAG5 236 aa13.54□□□□□ -0.24
PCF11-206ENST00000533018 LGALS14Q8TCE9 139 aa13.54□□□□□ -0.24
PCF11-206ENST00000533018 FYTTD1Q96QD9 318 aaKnown RBP13.54□□□□□ -0.24
PCF11-206ENST00000533018 OR2A7Q96R45 310 aa13.54□□□□□ -0.24
PCF11-206ENST00000533018 HSD17B10Q99714 261 aaKnown RBP13.54□□□□□ -0.24
PCF11-206ENST00000533018 SIGLEC8Q9NYZ4 499 aa13.54□□□□□ -0.24
PCF11-206ENST00000533018 ANXA10Q9UJ72 324 aa13.54□□□□□ -0.24
PCF11-206ENST00000533018 TRBV9A0A0B4J1U6 114 aa13.53□□□□□ -0.24
PCF11-206ENST00000533018 AIREO43918 545 aa13.53□□□□□ -0.24
PCF11-206ENST00000533018 ARPC4P59998 168 aa13.53□□□□□ -0.24
PCF11-206ENST00000533018 MXD1Q05195 221 aa13.53□□□□□ -0.24
PCF11-206ENST00000533018 HAGHQ16775 308 aa13.53□□□□□ -0.24
PCF11-206ENST00000533018 SFXN4Q6P4A7 337 aa13.53□□□□□ -0.24
PCF11-206ENST00000533018 DYNLRB2Q8TF09 96 aa13.53□□□□□ -0.24
PCF11-206ENST00000533018 FCGR1BQ92637 280 aa13.53□□□□□ -0.24
PCF11-206ENST00000533018 TAS2R8Q9NYW2 309 aa13.53□□□□□ -0.24
PCF11-206ENST00000533018 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP13.52□□□□□ -0.25
PCF11-206ENST00000533018 PPP5D1E7EU14 171 aa13.52□□□□□ -0.25
PCF11-206ENST00000533018 KBTBD11O94819 623 aa13.52□□□□□ -0.25
PCF11-206ENST00000533018 IGLV2-14P01704 120 aa13.52□□□□□ -0.25
PCF11-206ENST00000533018 IFNA6P05013 189 aa13.52□□□□□ -0.25
PCF11-206ENST00000533018 SSX9Q7RTT3 188 aa13.52□□□□□ -0.25
PCF11-206ENST00000533018 MFSD4AQ8N468 514 aa13.52□□□□□ -0.25
PCF11-206ENST00000533018 KCTD12Q96CX2 325 aaKnown RBP13.52□□□□□ -0.25
PCF11-206ENST00000533018 GPHA2Q96T91 129 aa13.52□□□□□ -0.25
PCF11-206ENST00000533018 RHBDL2Q9NX52 303 aa13.52□□□□□ -0.25
PCF11-206ENST00000533018 GAR1Q9NY12 217 aaKnown RBP13.52□□□□□ -0.25
PCF11-206ENST00000533018 FBXL7Q9UJT9 491 aa13.52□□□□□ -0.25
PCF11-206ENST00000533018 TNFSF12O43508 249 aa13.51□□□□□ -0.25
PCF11-206ENST00000533018 SSX5O60225 188 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms