RNA–Protein interactions for RNA: ENST00000531727.5

CPSF1-207, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 3 BASIC

Gene CPSF1, Length 704 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-207ENST00000531727 FCGR3BO75015 233 aa12.81□□□□□ -0.36
CPSF1-207ENST00000531727 SLC22A5O76082 557 aa12.81□□□□□ -0.36
CPSF1-207ENST00000531727 OR2A4O95047 310 aa12.81□□□□□ -0.36
CPSF1-207ENST00000531727 CSN3P07498 182 aa12.81□□□□□ -0.36
CPSF1-207ENST00000531727 CD36P16671 472 aa12.81□□□□□ -0.36
CPSF1-207ENST00000531727 NFYAP23511 347 aaPredicted RBP12.81□□□□□ -0.36
CPSF1-207ENST00000531727 PSMB9P28065 219 aa12.81□□□□□ -0.36
CPSF1-207ENST00000531727 RHOGP84095 191 aa12.81□□□□□ -0.36
CPSF1-207ENST00000531727 FAM223AQ8IWN6 122 aa12.81□□□□□ -0.36
CPSF1-207ENST00000531727 MMD2Q8IY49 270 aa12.81□□□□□ -0.36
CPSF1-207ENST00000531727 SPARTQ8N0X7 666 aa12.81□□□□□ -0.36
CPSF1-207ENST00000531727 NUDCD2Q8WVJ2 157 aa12.81□□□□□ -0.36
CPSF1-207ENST00000531727 CITED4Q96RK1 184 aa12.81□□□□□ -0.36
CPSF1-207ENST00000531727 SPIN2AQ99865 258 aa12.81□□□□□ -0.36
CPSF1-207ENST00000531727 SPIN2BQ9BPZ2 258 aa12.81□□□□□ -0.36
CPSF1-207ENST00000531727 DCUN1D5Q9BTE7 237 aa12.81□□□□□ -0.36
CPSF1-207ENST00000531727 AKIP1Q9NQ31 210 aa12.81□□□□□ -0.36
CPSF1-207ENST00000531727 RBMX2Q9Y388 322 aaKnown RBP12.81□□□□□ -0.36
CPSF1-207ENST00000531727 PRELID3BQ9Y3B1 194 aa12.81□□□□□ -0.36
CPSF1-207ENST00000531727 TRBV9A0A0B4J1U6 114 aa12.8□□□□□ -0.36
CPSF1-207ENST00000531727 TMEM235A6NFC5 223 aa12.8□□□□□ -0.36
CPSF1-207ENST00000531727 SCGNO76038 276 aa12.8□□□□□ -0.36
CPSF1-207ENST00000531727 ACTL6BO94805 426 aa12.8□□□□□ -0.36
CPSF1-207ENST00000531727 IGLV2-14P01704 120 aa12.8□□□□□ -0.36
CPSF1-207ENST00000531727 PRH1P02810 166 aa12.8□□□□□ -0.36
CPSF1-207ENST00000531727 LYL1P12980 280 aa12.8□□□□□ -0.36
CPSF1-207ENST00000531727 RPL30P62888 115 aaKnown RBP12.8□□□□□ -0.36
CPSF1-207ENST00000531727 ZNF45Q02386 682 aa12.8□□□□□ -0.36
CPSF1-207ENST00000531727 EXOSC2Q13868 293 aaKnown RBP12.8□□□□□ -0.36
CPSF1-207ENST00000531727 LCN12Q6JVE5 192 aa12.8□□□□□ -0.36
CPSF1-207ENST00000531727 CNIH2Q6PI25 160 aa12.8□□□□□ -0.36
CPSF1-207ENST00000531727 TPRA1Q86W33 373 aa12.8□□□□□ -0.36
CPSF1-207ENST00000531727 Q8N402 240 aa12.8□□□□□ -0.36
CPSF1-207ENST00000531727 TTC9CQ8N5M4 171 aa12.8□□□□□ -0.36
CPSF1-207ENST00000531727 FCGR1BQ92637 280 aa12.8□□□□□ -0.36
CPSF1-207ENST00000531727 THAP7Q9BT49 309 aaPredicted RBP12.8□□□□□ -0.36
CPSF1-207ENST00000531727 PEMTQ9UBM1 199 aa12.8□□□□□ -0.36
CPSF1-207ENST00000531727 DAPK2Q9UIK4 370 aa12.8□□□□□ -0.36
CPSF1-207ENST00000531727 MRPS7Q9Y2R9 242 aaKnown RBP12.8□□□□□ -0.36
CPSF1-207ENST00000531727 IGKV1D-13A0A0B4J2D9 117 aa12.79□□□□□ -0.36
CPSF1-207ENST00000531727 BMPR1BO00238 502 aa12.79□□□□□ -0.36
CPSF1-207ENST00000531727 SSX5O60225 188 aa12.79□□□□□ -0.36
CPSF1-207ENST00000531727 TUSC2O75896 110 aa12.79□□□□□ -0.36
CPSF1-207ENST00000531727 IGKV1-13P0DP09 117 aa12.79□□□□□ -0.36
CPSF1-207ENST00000531727 GNG2P59768 71 aa12.79□□□□□ -0.36
CPSF1-207ENST00000531727 ATP5G2Q06055 141 aa12.79□□□□□ -0.36
CPSF1-207ENST00000531727 OR2B11Q5JQS5 317 aa12.79□□□□□ -0.36
CPSF1-207ENST00000531727 GTSCR1Q86UQ5 136 aa12.79□□□□□ -0.36
CPSF1-207ENST00000531727 HSD17B10Q99714 261 aaKnown RBP12.79□□□□□ -0.36
CPSF1-207ENST00000531727 ANXA10Q9UJ72 324 aa12.79□□□□□ -0.36
CPSF1-207ENST00000531727 SSR3Q9UNL2 185 aa12.79□□□□□ -0.36
CPSF1-207ENST00000531727 RRP15Q9Y3B9 282 aaKnown RBP12.79□□□□□ -0.36
CPSF1-207ENST00000531727 DYNC2H1Q8NCM8 4307 aaKnown RBP12.79□□□□□ -0.36
CPSF1-207ENST00000531727 AIREO43918 545 aa12.78□□□□□ -0.36
CPSF1-207ENST00000531727 MECP2P51608 486 aaKnown RBP12.78□□□□□ -0.36
CPSF1-207ENST00000531727 EIF4EBP1Q13541 118 aaPredicted RBP12.78□□□□□ -0.36
CPSF1-207ENST00000531727 C10orf55Q5SWW7 151 aa12.78□□□□□ -0.36
CPSF1-207ENST00000531727 SFXN4Q6P4A7 337 aa12.78□□□□□ -0.36
CPSF1-207ENST00000531727 SLC25A42Q86VD7 318 aa12.78□□□□□ -0.36
CPSF1-207ENST00000531727 NECAP1Q8NC96 275 aa12.78□□□□□ -0.36
CPSF1-207ENST00000531727 OR2K2Q8NGT1 345 aa12.78□□□□□ -0.36
CPSF1-207ENST00000531727 OR4S2Q8NH73 311 aa12.78□□□□□ -0.36
CPSF1-207ENST00000531727 LGALS14Q8TCE9 139 aa12.78□□□□□ -0.36
CPSF1-207ENST00000531727 OR51E2Q9H255 320 aa12.78□□□□□ -0.36
CPSF1-207ENST00000531727 PALMDQ9NP74 551 aa12.78□□□□□ -0.36
CPSF1-207ENST00000531727 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.77□□□□□ -0.37
CPSF1-207ENST00000531727 IZUMO1RA6ND01 250 aa12.77□□□□□ -0.37
CPSF1-207ENST00000531727 TEX22C9J3V5 150 aa12.77□□□□□ -0.37
CPSF1-207ENST00000531727 VKORC1L1Q8N0U8 176 aa12.77□□□□□ -0.37
CPSF1-207ENST00000531727 VSTM2AQ8TAG5 236 aa12.77□□□□□ -0.37
CPSF1-207ENST00000531727 TCTEX1D2Q8WW35 142 aa12.77□□□□□ -0.37
CPSF1-207ENST00000531727 OR2A7Q96R45 310 aa12.77□□□□□ -0.37
CPSF1-207ENST00000531727 SPATA25Q9BR10 227 aa12.77□□□□□ -0.37
CPSF1-207ENST00000531727 EDA2RQ9HAV5 297 aa12.77□□□□□ -0.37
CPSF1-207ENST00000531727 RHBDL2Q9NX52 303 aa12.77□□□□□ -0.37
CPSF1-207ENST00000531727 ZNF257Q9Y2Q1 563 aa12.77□□□□□ -0.37
CPSF1-207ENST00000531727 LYSTQ99698 3801 aa12.77□□□□□ -0.37
CPSF1-207ENST00000531727 TNCP24821 2201 aa12.76□□□□□ -0.37
CPSF1-207ENST00000531727 HMX3A6NHT5 357 aa12.76□□□□□ -0.37
CPSF1-207ENST00000531727 OR2J3O76001 311 aa12.76□□□□□ -0.37
CPSF1-207ENST00000531727 KBTBD11O94819 623 aa12.76□□□□□ -0.37
CPSF1-207ENST00000531727 HAGHQ16775 308 aa12.76□□□□□ -0.37
CPSF1-207ENST00000531727 C15orf32Q32M92 178 aa12.76□□□□□ -0.37
CPSF1-207ENST00000531727 FAM209BQ5JX69 171 aa12.76□□□□□ -0.37
CPSF1-207ENST00000531727 ZNF66Q6ZN08 573 aa12.76□□□□□ -0.37
CPSF1-207ENST00000531727 PUSL1Q8N0Z8 303 aaKnown RBP12.76□□□□□ -0.37
CPSF1-207ENST00000531727 TMEM167AQ8TBQ9 72 aa12.76□□□□□ -0.37
CPSF1-207ENST00000531727 ISOC1Q96CN7 298 aa12.76□□□□□ -0.37
CPSF1-207ENST00000531727 TUBA4BQ9H853 241 aa12.76□□□□□ -0.37
CPSF1-207ENST00000531727 SPATA2Q9UM82 520 aa12.76□□□□□ -0.37
CPSF1-207ENST00000531727 SDC2P34741 201 aa12.75□□□□□ -0.37
CPSF1-207ENST00000531727 MAS1LP35410 378 aa12.75□□□□□ -0.37
CPSF1-207ENST00000531727 RPL27AP46776 148 aaKnown RBP12.75□□□□□ -0.37
CPSF1-207ENST00000531727 BRWD1-AS2P59051 145 aa12.75□□□□□ -0.37
CPSF1-207ENST00000531727 ADAMTSL5Q6ZMM2 481 aa12.75□□□□□ -0.37
CPSF1-207ENST00000531727 MFSD4AQ8N468 514 aa12.75□□□□□ -0.37
CPSF1-207ENST00000531727 KCTD12Q96CX2 325 aaKnown RBP12.75□□□□□ -0.37
CPSF1-207ENST00000531727 YTHDF1Q9BYJ9 559 aaKnown RBP12.75□□□□□ -0.37
CPSF1-207ENST00000531727 Q9H521 79 aa12.75□□□□□ -0.37
CPSF1-207ENST00000531727 TAS2R8Q9NYW2 309 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 98.4 ms