RNA–Protein interactions for RNA: ENST00000514093.5

SQSTM1-215, Transcript of sequestosome 1, humanhuman

TSL 5

Gene SQSTM1, Length 842 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-215ENST00000514093 LINC00473A8K010 186 aa15.04■□□□□ -0
SQSTM1-215ENST00000514093 FOXI3A8MTJ6 420 aaPredicted RBP15.04■□□□□ -0
SQSTM1-215ENST00000514093 UBE2CO00762 179 aa15.04■□□□□ -0
SQSTM1-215ENST00000514093 RPL35AP18077 110 aaKnown RBP15.04■□□□□ -0
SQSTM1-215ENST00000514093 ST3GAL4Q11206 333 aa15.04■□□□□ -0
SQSTM1-215ENST00000514093 ZNF585BQ52M93 769 aa15.04■□□□□ -0
SQSTM1-215ENST00000514093 FAM209BQ5JX69 171 aa15.04■□□□□ -0
SQSTM1-215ENST00000514093 UNQ9165/PRO28630Q6UXU0 137 aa15.04■□□□□ -0
SQSTM1-215ENST00000514093 FAM89BQ8N5H3 189 aa15.04■□□□□ -0
SQSTM1-215ENST00000514093 OR2C3Q8N628 320 aa15.04■□□□□ -0
SQSTM1-215ENST00000514093 STPG3Q8N7X2 389 aa15.04■□□□□ -0
SQSTM1-215ENST00000514093 OR4A4PQ8NGN8 299 aa15.04■□□□□ -0
SQSTM1-215ENST00000514093 FBLIM1Q8WUP2 373 aa15.04■□□□□ -0
SQSTM1-215ENST00000514093 URM1Q9BTM9 101 aaKnown RBP15.04■□□□□ -0
SQSTM1-215ENST00000514093 HSF4Q9ULV5 492 aa15.04■□□□□ -0
SQSTM1-215ENST00000514093 RBM7Q9Y580 266 aaKnown RBP15.04■□□□□ -0
SQSTM1-215ENST00000514093 ABCA13Q86UQ4 5058 aa15.04■□□□□ -0
SQSTM1-215ENST00000514093 A8MWP6 167 aa15.03■□□□□ -0
SQSTM1-215ENST00000514093 FABP7O15540 132 aa15.03■□□□□ -0
SQSTM1-215ENST00000514093 BPNT1O95861 308 aa15.03■□□□□ -0
SQSTM1-215ENST00000514093 CD1AP06126 327 aa15.03■□□□□ -0
SQSTM1-215ENST00000514093 GSTT2P0CG29 244 aa15.03■□□□□ -0
SQSTM1-215ENST00000514093 GSTT2BP0CG30 244 aa15.03■□□□□ -0
SQSTM1-215ENST00000514093 CTRB1P17538 263 aa15.03■□□□□ -0
SQSTM1-215ENST00000514093 DUTP33316 252 aaKnown RBP15.03■□□□□ -0
SQSTM1-215ENST00000514093 SERPINB10P48595 397 aa15.03■□□□□ -0
SQSTM1-215ENST00000514093 NANOS2P60321 138 aaKnown RBP15.03■□□□□ -0
SQSTM1-215ENST00000514093 CTRB2Q6GPI1 263 aa15.03■□□□□ -0
SQSTM1-215ENST00000514093 OR10J5Q8NHC4 309 aa15.03■□□□□ -0
SQSTM1-215ENST00000514093 ZNF257Q9Y2Q1 563 aa15.03■□□□□ -0
SQSTM1-215ENST00000514093 TRAV25A0A0B4J276 109 aa15.02■□□□□ -0
SQSTM1-215ENST00000514093 TEX22C9J3V5 150 aa15.02■□□□□ -0
SQSTM1-215ENST00000514093 TPBGQ13641 420 aa15.02■□□□□ -0
SQSTM1-215ENST00000514093 CDK10Q15131 360 aa15.02■□□□□ -0
SQSTM1-215ENST00000514093 PLAC9Q5JTB6 97 aa15.02■□□□□ -0
SQSTM1-215ENST00000514093 TTC23Q5W5X9 447 aa15.02■□□□□ -0
SQSTM1-215ENST00000514093 OR4A47Q6IF82 309 aa15.02■□□□□ -0
SQSTM1-215ENST00000514093 SLC25A42Q86VD7 318 aa15.02■□□□□ -0
SQSTM1-215ENST00000514093 MMD2Q8IY49 270 aa15.02■□□□□ -0
SQSTM1-215ENST00000514093 FANCD2OSQ96PS1 177 aa15.02■□□□□ -0
SQSTM1-215ENST00000514093 DCUN1D5Q9BTE7 237 aa15.02■□□□□ -0
SQSTM1-215ENST00000514093 FBXL17Q9UF56 701 aa15.02■□□□□ -0
SQSTM1-215ENST00000514093 DPPA5A6NC42 116 aa15.01□□□□□ -0.01
SQSTM1-215ENST00000514093 EFCAB10A6NFE3 127 aa15.01□□□□□ -0.01
SQSTM1-215ENST00000514093 E7EUB6 86 aa15.01□□□□□ -0.01
SQSTM1-215ENST00000514093 ATP5HO75947 161 aa15.01□□□□□ -0.01
SQSTM1-215ENST00000514093 FCGR2BP31994 310 aaPredicted RBP15.01□□□□□ -0.01
SQSTM1-215ENST00000514093 MAP2K4P45985 399 aa15.01□□□□□ -0.01
SQSTM1-215ENST00000514093 ZFP1Q6P2D0 407 aa15.01□□□□□ -0.01
SQSTM1-215ENST00000514093 SLC38A6Q8IZM9 456 aa15.01□□□□□ -0.01
SQSTM1-215ENST00000514093 VKORC1L1Q8N0U8 176 aa15.01□□□□□ -0.01
SQSTM1-215ENST00000514093 OR6M1Q8NGM8 313 aa15.01□□□□□ -0.01
SQSTM1-215ENST00000514093 OSR1Q8TAX0 266 aaPredicted RBP15.01□□□□□ -0.01
SQSTM1-215ENST00000514093 FYTTD1Q96QD9 318 aaKnown RBP15.01□□□□□ -0.01
SQSTM1-215ENST00000514093 FAT2Q9NYQ8 4349 aa15.01□□□□□ -0.01
SQSTM1-215ENST00000514093 DNAH2Q9P225 4427 aa15□□□□□ -0.01
SQSTM1-215ENST00000514093 TRBV6-7A0A0A0MS04 114 aa15□□□□□ -0.01
SQSTM1-215ENST00000514093 IGHV3-35A0A0C4DH35 117 aa15□□□□□ -0.01
SQSTM1-215ENST00000514093 MYL12BO14950 172 aa15□□□□□ -0.01
SQSTM1-215ENST00000514093 S1PR2O95136 353 aa15□□□□□ -0.01
SQSTM1-215ENST00000514093 IL6RP08887 468 aaPredicted RBP15□□□□□ -0.01
SQSTM1-215ENST00000514093 WNT4P56705 351 aa15□□□□□ -0.01
SQSTM1-215ENST00000514093 SETD9Q8NE22 299 aa15□□□□□ -0.01
SQSTM1-215ENST00000514093 MAFIPQ8WZ33 124 aa15□□□□□ -0.01
SQSTM1-215ENST00000514093 PHYHIPQ92561 330 aa15□□□□□ -0.01
SQSTM1-215ENST00000514093 EEF1AKMT3Q96AZ1 226 aa15□□□□□ -0.01
SQSTM1-215ENST00000514093 ADTRPQ96IZ2 230 aa15□□□□□ -0.01
SQSTM1-215ENST00000514093 CABLES2Q9BTV7 478 aa15□□□□□ -0.01
SQSTM1-215ENST00000514093 KIR2DL5BA0A0G2JN68 375 aa14.99□□□□□ -0.01
SQSTM1-215ENST00000514093 KIR2DL5BA0A0G2JPC4 375 aa14.99□□□□□ -0.01
SQSTM1-215ENST00000514093 NPIPB5A8MRT5 1133 aa14.99□□□□□ -0.01
SQSTM1-215ENST00000514093 J3QRK9 145 aa14.99□□□□□ -0.01
SQSTM1-215ENST00000514093 CREBL2O60519 120 aaPredicted RBP14.99□□□□□ -0.01
SQSTM1-215ENST00000514093 CLEC3BP05452 202 aa14.99□□□□□ -0.01
SQSTM1-215ENST00000514093 C8orf88P0DMB2 117 aa14.99□□□□□ -0.01
SQSTM1-215ENST00000514093 AREGP15514 252 aa14.99□□□□□ -0.01
SQSTM1-215ENST00000514093 OR2B11Q5JQS5 317 aa14.99□□□□□ -0.01
SQSTM1-215ENST00000514093 KIR2DL5AQ8N109 375 aa14.99□□□□□ -0.01
SQSTM1-215ENST00000514093 KIR2DL5BQ8NHK3 375 aa14.99□□□□□ -0.01
SQSTM1-215ENST00000514093 SMPD3Q9NY59 655 aaPredicted RBP14.99□□□□□ -0.01
SQSTM1-215ENST00000514093 A0A1B0GW64 132 aa14.98□□□□□ -0.01
SQSTM1-215ENST00000514093 MFSD2BA6NFX1 497 aa14.98□□□□□ -0.01
SQSTM1-215ENST00000514093 FCGR3BO75015 233 aa14.98□□□□□ -0.01
SQSTM1-215ENST00000514093 IFNA4P05014 189 aa14.98□□□□□ -0.01
SQSTM1-215ENST00000514093 CD37P11049 281 aa14.98□□□□□ -0.01
SQSTM1-215ENST00000514093 ODF3L2Q3SX64 289 aa14.98□□□□□ -0.01
SQSTM1-215ENST00000514093 HSD17B12Q53GQ0 312 aa14.98□□□□□ -0.01
SQSTM1-215ENST00000514093 OR5B3Q8NH48 314 aa14.98□□□□□ -0.01
SQSTM1-215ENST00000514093 C11orf45Q8TAV5 145 aa14.98□□□□□ -0.01
SQSTM1-215ENST00000514093 MARC2Q969Z3 335 aa14.98□□□□□ -0.01
SQSTM1-215ENST00000514093 GFI1Q99684 422 aa14.98□□□□□ -0.01
SQSTM1-215ENST00000514093 PLGRKTQ9HBL7 147 aa14.98□□□□□ -0.01
SQSTM1-215ENST00000514093 MRPL27Q9P0M9 148 aaKnown RBP14.98□□□□□ -0.01
SQSTM1-215ENST00000514093 PKHD1P08F94 4074 aa14.98□□□□□ -0.01
SQSTM1-215ENST00000514093 REG1AP05451 166 aa14.97□□□□□ -0.01
SQSTM1-215ENST00000514093 FCGR3AP08637 254 aa14.97□□□□□ -0.01
SQSTM1-215ENST00000514093 RPL27AP46776 148 aaKnown RBP14.97□□□□□ -0.01
SQSTM1-215ENST00000514093 CLDN12P56749 244 aa14.97□□□□□ -0.01
SQSTM1-215ENST00000514093 RBMS2Q15434 407 aaKnown RBP14.97□□□□□ -0.01
SQSTM1-215ENST00000514093 CYGBQ8WWM9 190 aa14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 106.6 ms