RNA–Protein interactions for RNA: ENST00000509552.5

CCHCR1-228, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 1 (best)

Gene CCHCR1, Length 2,304 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-228ENST00000509552 ZNRF1Q8ND25 227 aa14.87□□□□□ -0.03
CCHCR1-228ENST00000509552 OR52E5Q8NH55 327 aa14.87□□□□□ -0.03
CCHCR1-228ENST00000509552 GATAD1Q8WUU5 269 aa14.87□□□□□ -0.03
CCHCR1-228ENST00000509552 FRZBQ92765 325 aa14.87□□□□□ -0.03
CCHCR1-228ENST00000509552 MEGF10Q96KG7 1140 aa14.87□□□□□ -0.03
CCHCR1-228ENST00000509552 DIRC2Q96SL1 478 aa14.87□□□□□ -0.03
CCHCR1-228ENST00000509552 RAB9BQ9NP90 201 aa14.87□□□□□ -0.03
CCHCR1-228ENST00000509552 HEYLQ9NQ87 328 aaPredicted RBP14.87□□□□□ -0.03
CCHCR1-228ENST00000509552 SMCO3A2RU48 225 aa14.87□□□□□ -0.03
CCHCR1-228ENST00000509552 IFITM10A6NMD0 228 aa14.87□□□□□ -0.03
CCHCR1-228ENST00000509552 LINC00587B1AMM8 73 aa14.87□□□□□ -0.03
CCHCR1-228ENST00000509552 RPL39P5Q59GN2 51 aa14.87□□□□□ -0.03
CCHCR1-228ENST00000509552 ABHD5Q8WTS1 349 aa14.87□□□□□ -0.03
CCHCR1-228ENST00000509552 NEIL1Q96FI4 390 aaPredicted RBP14.87□□□□□ -0.03
CCHCR1-228ENST00000509552 OR5B12Q96R08 314 aa14.87□□□□□ -0.03
CCHCR1-228ENST00000509552 GALR2O43603 387 aaPredicted RBP14.86□□□□□ -0.03
CCHCR1-228ENST00000509552 MPDU1O75352 247 aa14.86□□□□□ -0.03
CCHCR1-228ENST00000509552 GLRXP35754 106 aa14.86□□□□□ -0.03
CCHCR1-228ENST00000509552 LOXL3P58215 753 aa14.86□□□□□ -0.03
CCHCR1-228ENST00000509552 OR10A7Q8NGE5 316 aa14.86□□□□□ -0.03
CCHCR1-228ENST00000509552 CALYQ9NYX4 217 aa14.86□□□□□ -0.03
CCHCR1-228ENST00000509552 H7BYZ3 331 aa14.86□□□□□ -0.03
CCHCR1-228ENST00000509552 SPRY3O43610 288 aa14.86□□□□□ -0.03
CCHCR1-228ENST00000509552 RAB7AP51149 207 aa14.86□□□□□ -0.03
CCHCR1-228ENST00000509552 VHLLQ6RSH7 139 aa14.86□□□□□ -0.03
CCHCR1-228ENST00000509552 IFI27L2Q9H2X8 130 aa14.86□□□□□ -0.03
CCHCR1-228ENST00000509552 PTPRBP23467 1997 aa14.85□□□□□ -0.03
CCHCR1-228ENST00000509552 A0A1W2PPV4 95 aa14.85□□□□□ -0.03
CCHCR1-228ENST00000509552 IGHV3-7P01780 117 aa14.85□□□□□ -0.03
CCHCR1-228ENST00000509552 ZNF134P52741 427 aa14.85□□□□□ -0.03
CCHCR1-228ENST00000509552 IGF2-ASQ6U949 168 aa14.85□□□□□ -0.03
CCHCR1-228ENST00000509552 C11orf94C9JXX5 98 aa14.84□□□□□ -0.03
CCHCR1-228ENST00000509552 C4orf17Q53FE4 359 aa14.84□□□□□ -0.03
CCHCR1-228ENST00000509552 ZNF474Q6S9Z5 364 aaPredicted RBP14.84□□□□□ -0.03
CCHCR1-228ENST00000509552 VKORC1L1Q8N0U8 176 aa14.84□□□□□ -0.03
CCHCR1-228ENST00000509552 SRD5A3Q9H8P0 318 aa14.84□□□□□ -0.03
CCHCR1-228ENST00000509552 LHBP01229 141 aa14.84□□□□□ -0.03
CCHCR1-228ENST00000509552 PFN1P07737 140 aaKnown RBP14.84□□□□□ -0.03
CCHCR1-228ENST00000509552 GALR1P47211 349 aa14.84□□□□□ -0.03
CCHCR1-228ENST00000509552 C3orf36Q3SXR2 165 aa14.84□□□□□ -0.03
CCHCR1-228ENST00000509552 PDLIM3Q53GG5 364 aaPredicted RBP14.84□□□□□ -0.03
CCHCR1-228ENST00000509552 HIST3H2BBQ8N257 126 aa14.84□□□□□ -0.03
CCHCR1-228ENST00000509552 OR4S2Q8NH73 311 aa14.84□□□□□ -0.03
CCHCR1-228ENST00000509552 Q8TCH9 128 aa14.84□□□□□ -0.03
CCHCR1-228ENST00000509552 ITLN1Q8WWA0 313 aa14.84□□□□□ -0.03
CCHCR1-228ENST00000509552 RAB1CQ92928 201 aa14.84□□□□□ -0.03
CCHCR1-228ENST00000509552 ANAPC16Q96DE5 110 aa14.84□□□□□ -0.03
CCHCR1-228ENST00000509552 NCOR1P1Q9H4R4 102 aa14.84□□□□□ -0.03
CCHCR1-228ENST00000509552 TMEM140Q9NV12 185 aa14.84□□□□□ -0.03
CCHCR1-228ENST00000509552 ITGB1BP1O14713 200 aa14.83□□□□□ -0.03
CCHCR1-228ENST00000509552 VENTXO95231 258 aa14.83□□□□□ -0.03
CCHCR1-228ENST00000509552 SOD3P08294 240 aa14.83□□□□□ -0.03
CCHCR1-228ENST00000509552 DEFA4P12838 97 aa14.83□□□□□ -0.03
CCHCR1-228ENST00000509552 VDAC2P45880 294 aaPredicted RBP14.83□□□□□ -0.03
CCHCR1-228ENST00000509552 RELBQ01201 579 aa14.83□□□□□ -0.03
CCHCR1-228ENST00000509552 SPRNQ5BIV9 151 aa14.83□□□□□ -0.03
CCHCR1-228ENST00000509552 Q8N7P7 452 aa14.83□□□□□ -0.03
CCHCR1-228ENST00000509552 NECAP1Q8NC96 275 aa14.83□□□□□ -0.03
CCHCR1-228ENST00000509552 GAB2Q9UQC2 676 aa14.83□□□□□ -0.03
CCHCR1-228ENST00000509552 PDE6DO43924 150 aa14.83□□□□□ -0.04
CCHCR1-228ENST00000509552 GYPAP02724 150 aa14.83□□□□□ -0.04
CCHCR1-228ENST00000509552 OPRK1P41145 380 aa14.83□□□□□ -0.04
CCHCR1-228ENST00000509552 SELENOVP59797 346 aa14.83□□□□□ -0.04
CCHCR1-228ENST00000509552 TMEM249Q2WGJ8 235 aa14.83□□□□□ -0.04
CCHCR1-228ENST00000509552 PYY3Q5JQD4 70 aa14.83□□□□□ -0.04
CCHCR1-228ENST00000509552 OR10D4PQ8NGN7 298 aa14.83□□□□□ -0.04
CCHCR1-228ENST00000509552 GPR61Q9BZJ8 451 aa14.83□□□□□ -0.04
CCHCR1-228ENST00000509552 CACNA1HO95180 2353 aa14.83□□□□□ -0.04
CCHCR1-228ENST00000509552 TRAV38-1A0A0B4J264 116 aa14.82□□□□□ -0.04
CCHCR1-228ENST00000509552 RRHO14718 337 aa14.82□□□□□ -0.04
CCHCR1-228ENST00000509552 PDZD11Q5EBL8 140 aa14.82□□□□□ -0.04
CCHCR1-228ENST00000509552 GFI1BQ5VTD9 330 aa14.82□□□□□ -0.04
CCHCR1-228ENST00000509552 TREML4Q6UXN2 200 aa14.82□□□□□ -0.04
CCHCR1-228ENST00000509552 TGIF2LYQ8IUE0 185 aa14.82□□□□□ -0.04
CCHCR1-228ENST00000509552 OR51G1Q8NGK1 321 aa14.82□□□□□ -0.04
CCHCR1-228ENST00000509552 PYGO2Q9BRQ0 406 aa14.82□□□□□ -0.04
CCHCR1-228ENST00000509552 LOC400499M0QZD8 3231 aa14.82□□□□□ -0.04
CCHCR1-228ENST00000509552 GFRA3O60609 400 aa14.82□□□□□ -0.04
CCHCR1-228ENST00000509552 GCSAMLQ5JQS6 135 aa14.82□□□□□ -0.04
CCHCR1-228ENST00000509552 ZNF436-AS1Q8NC38 126 aaPredicted RBP14.82□□□□□ -0.04
CCHCR1-228ENST00000509552 GFOD1Q9NXC2 390 aa14.82□□□□□ -0.04
CCHCR1-228ENST00000509552 IGLV3-9A0A075B6K5 115 aa14.81□□□□□ -0.04
CCHCR1-228ENST00000509552 TRAV3A0A0B4J244 114 aa14.81□□□□□ -0.04
CCHCR1-228ENST00000509552 PPP5D1E7EU14 171 aa14.81□□□□□ -0.04
CCHCR1-228ENST00000509552 PHOX2AO14813 284 aa14.81□□□□□ -0.04
CCHCR1-228ENST00000509552 SLC31A2O15432 143 aa14.81□□□□□ -0.04
CCHCR1-228ENST00000509552 HRASP01112 189 aa14.81□□□□□ -0.04
CCHCR1-228ENST00000509552 IGHV2-70P01814 119 aa14.81□□□□□ -0.04
CCHCR1-228ENST00000509552 TMPRSS3P57727 454 aa14.81□□□□□ -0.04
CCHCR1-228ENST00000509552 C1orf185Q5T7R7 199 aa14.81□□□□□ -0.04
CCHCR1-228ENST00000509552 IGFL3Q6UXB1 125 aa14.81□□□□□ -0.04
CCHCR1-228ENST00000509552 DDB2Q92466 427 aa14.81□□□□□ -0.04
CCHCR1-228ENST00000509552 RNF7Q9UBF6 113 aa14.81□□□□□ -0.04
CCHCR1-228ENST00000509552 PITPNC1Q9UKF7 332 aa14.81□□□□□ -0.04
CCHCR1-228ENST00000509552 TCF19Q9Y242 345 aa14.81□□□□□ -0.04
CCHCR1-228ENST00000509552 FAM215AQ9Y5M1 114 aa14.81□□□□□ -0.04
CCHCR1-228ENST00000509552 TRGV10A0A0A0MS01 117 aa14.81□□□□□ -0.04
CCHCR1-228ENST00000509552 TRGV8A0A0C4DH27 118 aa14.81□□□□□ -0.04
CCHCR1-228ENST00000509552 KBTBD11-OT1A0A1B0GTJ5 212 aa14.81□□□□□ -0.04
CCHCR1-228ENST00000509552 CGB3P0DN86 165 aa14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms