RNA–Protein interactions for RNA: ENST00000508618.5

GYPB-209, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 2

Gene GYPB, Length 388 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-209ENST00000508618 ORM1P02763 201 aa0.39□□□□□ -2.35
GYPB-209ENST00000508618 LGALS1P09382 135 aaKnown RBP0.39□□□□□ -2.35
GYPB-209ENST00000508618 HPCAP84074 193 aa0.39□□□□□ -2.35
GYPB-209ENST00000508618 GNA13Q14344 377 aa0.39□□□□□ -2.35
GYPB-209ENST00000508618 LRRC75BQ2VPJ9 315 aa0.39□□□□□ -2.35
GYPB-209ENST00000508618 HLA-DRB5Q30154 266 aa0.39□□□□□ -2.35
GYPB-209ENST00000508618 ARHGAP11BQ3KRB8 267 aa0.39□□□□□ -2.35
GYPB-209ENST00000508618 ACSM3Q53FZ2 586 aa0.39□□□□□ -2.35
GYPB-209ENST00000508618 ZNF705AQ6ZN79 300 aaPredicted RBP0.39□□□□□ -2.35
GYPB-209ENST00000508618 SLC36A1Q7Z2H8 476 aa0.39□□□□□ -2.35
GYPB-209ENST00000508618 RNASE6Q93091 150 aaKnown RBP0.39□□□□□ -2.35
GYPB-209ENST00000508618 C12orf43Q96C57 262 aaKnown RBP0.39□□□□□ -2.35
GYPB-209ENST00000508618 PPCDCQ96CD2 204 aa0.39□□□□□ -2.35
GYPB-209ENST00000508618 MROQ9BYG7 248 aa0.39□□□□□ -2.35
GYPB-209ENST00000508618 CHST6Q9GZX3 395 aa0.39□□□□□ -2.35
GYPB-209ENST00000508618 SLC22A4Q9H015 551 aa0.39□□□□□ -2.35
GYPB-209ENST00000508618 HDGFL3Q9Y3E1 203 aa0.39□□□□□ -2.35
GYPB-209ENST00000508618 EIF4G1Q04637 1599 aaKnown RBP0.38□□□□□ -2.35
GYPB-209ENST00000508618 FLT4P35916 1363 aa0.38□□□□□ -2.35
GYPB-209ENST00000508618 A0A0D9SEW6 157 aa0.38□□□□□ -2.35
GYPB-209ENST00000508618 MEIS3P1A6NDR6 274 aa0.38□□□□□ -2.35
GYPB-209ENST00000508618 APOMO95445 188 aa0.38□□□□□ -2.35
GYPB-209ENST00000508618 IL6P05231 212 aa0.38□□□□□ -2.35
GYPB-209ENST00000508618 HIST1H1CP16403 213 aaKnown RBP0.38□□□□□ -2.35
GYPB-209ENST00000508618 SYT1P21579 422 aa0.38□□□□□ -2.35
GYPB-209ENST00000508618 CD40LGP29965 261 aa0.38□□□□□ -2.35
GYPB-209ENST00000508618 CCR2P41597 374 aa0.38□□□□□ -2.35
GYPB-209ENST00000508618 RAB14P61106 215 aa0.38□□□□□ -2.35
GYPB-209ENST00000508618 HLA-DRB3P79483 266 aa0.38□□□□□ -2.35
GYPB-209ENST00000508618 MGAT3Q09327 533 aa0.38□□□□□ -2.35
GYPB-209ENST00000508618 CDK5R1Q15078 307 aa0.38□□□□□ -2.35
GYPB-209ENST00000508618 ZNHIT3Q15649 155 aaPredicted RBP0.38□□□□□ -2.35
GYPB-209ENST00000508618 MOGQ16653 247 aa0.38□□□□□ -2.35
GYPB-209ENST00000508618 NDUFA5Q16718 116 aa0.38□□□□□ -2.35
GYPB-209ENST00000508618 DNAL1Q4LDG9 190 aa0.38□□□□□ -2.35
GYPB-209ENST00000508618 CLEC6AQ6EIG7 209 aa0.38□□□□□ -2.35
GYPB-209ENST00000508618 DNM1P34Q6PK57 102 aa0.38□□□□□ -2.35
GYPB-209ENST00000508618 FAM19A5Q7Z5A7 132 aaPredicted RBP0.38□□□□□ -2.35
GYPB-209ENST00000508618 GPHB5Q86YW7 130 aa0.38□□□□□ -2.35
GYPB-209ENST00000508618 Q8N2B8 174 aa0.38□□□□□ -2.35
GYPB-209ENST00000508618 RPP25LQ8N5L8 163 aaKnown RBP0.38□□□□□ -2.35
GYPB-209ENST00000508618 ANKRD36BP1Q96IX9 119 aa0.38□□□□□ -2.35
GYPB-209ENST00000508618 PACRGQ96M98 296 aaPredicted RBP0.38□□□□□ -2.35
GYPB-209ENST00000508618 ODF3Q96PU9 254 aa0.38□□□□□ -2.35
GYPB-209ENST00000508618 IMMP2LQ96T52 175 aa0.38□□□□□ -2.35
GYPB-209ENST00000508618 NMNAT3Q96T66 252 aa0.38□□□□□ -2.35
GYPB-209ENST00000508618 MRPL57Q9BQC6 102 aaKnown RBP0.38□□□□□ -2.35
GYPB-209ENST00000508618 ZNHIT6Q9NWK9 470 aaKnown RBP0.38□□□□□ -2.35
GYPB-209ENST00000508618 RSL24D1Q9UHA3 163 aaKnown RBP0.38□□□□□ -2.35
GYPB-209ENST00000508618 RBM7Q9Y580 266 aaKnown RBP0.38□□□□□ -2.35
GYPB-209ENST00000508618 BRWD1Q9NSI6 2320 aa0.37□□□□□ -2.35
GYPB-209ENST00000508618 DLG5Q8TDM6 1919 aa0.37□□□□□ -2.35
GYPB-209ENST00000508618 TRAV38-1A0A0B4J264 116 aa0.37□□□□□ -2.35
GYPB-209ENST00000508618 IGKV1-9A0A0C4DH69 117 aa0.37□□□□□ -2.35
GYPB-209ENST00000508618 HCRTO43612 131 aa0.37□□□□□ -2.35
GYPB-209ENST00000508618 NPPAP01160 153 aa0.37□□□□□ -2.35
GYPB-209ENST00000508618 PRB4P10163 310 aaPredicted RBP0.37□□□□□ -2.35
GYPB-209ENST00000508618 NFYAP23511 347 aaPredicted RBP0.37□□□□□ -2.35
GYPB-209ENST00000508618 SLCO1A2P46721 670 aa0.37□□□□□ -2.35
GYPB-209ENST00000508618 HAAOP46952 286 aa0.37□□□□□ -2.35
GYPB-209ENST00000508618 HADHBP55084 474 aaKnown RBP0.37□□□□□ -2.35
GYPB-209ENST00000508618 CTAG1AP78358 180 aa0.37□□□□□ -2.35
GYPB-209ENST00000508618 SMAGPQ0VAQ4 97 aa0.37□□□□□ -2.35
GYPB-209ENST00000508618 C4orf26Q17RF5 130 aa0.37□□□□□ -2.35
GYPB-209ENST00000508618 SDHAF4Q5VUM1 108 aa0.37□□□□□ -2.35
GYPB-209ENST00000508618 C12orf29Q8N999 325 aa0.37□□□□□ -2.35
GYPB-209ENST00000508618 SLC37A2Q8TED4 501 aa0.37□□□□□ -2.35
GYPB-209ENST00000508618 ASB13Q8WXK3 278 aa0.37□□□□□ -2.35
GYPB-209ENST00000508618 CCL13Q99616 98 aa0.37□□□□□ -2.35
GYPB-209ENST00000508618 DHRS9Q9BPW9 319 aa0.37□□□□□ -2.35
GYPB-209ENST00000508618 TIPINQ9BVW5 301 aa0.37□□□□□ -2.35
GYPB-209ENST00000508618 EURLQ9NYK6 297 aa0.37□□□□□ -2.35
GYPB-209ENST00000508618 CHD5Q8TDI0 1954 aa0.37□□□□□ -2.35
GYPB-209ENST00000508618 SIPA1L1O43166 1804 aa0.36□□□□□ -2.35
GYPB-209ENST00000508618 ROS1P08922 2347 aa0.36□□□□□ -2.35
GYPB-209ENST00000508618 MYH11P35749 1972 aa0.36□□□□□ -2.35
GYPB-209ENST00000508618 AZIN1O14977 448 aa0.36□□□□□ -2.35
GYPB-209ENST00000508618 ORC5O43913 435 aa0.36□□□□□ -2.35
GYPB-209ENST00000508618 MSNP26038 577 aaKnown RBP0.36□□□□□ -2.35
GYPB-209ENST00000508618 RPL28P46779 137 aaKnown RBP0.36□□□□□ -2.35
GYPB-209ENST00000508618 REG1BP48304 166 aa0.36□□□□□ -2.35
GYPB-209ENST00000508618 AQP4P55087 323 aa0.36□□□□□ -2.35
GYPB-209ENST00000508618 POLR2GP62487 172 aaKnown RBP eCLIP0.36□□□□□ -2.35
GYPB-209ENST00000508618 ANGPT1Q15389 498 aa0.36□□□□□ -2.35
GYPB-209ENST00000508618 C10orf55Q5SWW7 151 aa0.36□□□□□ -2.35
GYPB-209ENST00000508618 C5orf46Q6UWT4 87 aa0.36□□□□□ -2.35
GYPB-209ENST00000508618 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP0.36□□□□□ -2.35
GYPB-209ENST00000508618 CD302Q8IX05 232 aa0.36□□□□□ -2.35
GYPB-209ENST00000508618 UMODL1-AS1Q8N2C9 162 aa0.36□□□□□ -2.35
GYPB-209ENST00000508618 OR7G1Q8NGA0 311 aa0.36□□□□□ -2.35
GYPB-209ENST00000508618 GNPNAT1Q96EK6 184 aaPredicted RBP0.36□□□□□ -2.35
GYPB-209ENST00000508618 TTTY13Q9BZ97 58 aa0.36□□□□□ -2.35
GYPB-209ENST00000508618 NSRP1Q9H0G5 558 aaKnown RBP0.36□□□□□ -2.35
GYPB-209ENST00000508618 CHMP4BQ9H444 224 aaKnown RBP0.36□□□□□ -2.35
GYPB-209ENST00000508618 SPACA1Q9HBV2 294 aa0.36□□□□□ -2.35
GYPB-209ENST00000508618 TREM1Q9NP99 234 aa0.36□□□□□ -2.35
GYPB-209ENST00000508618 CD300AQ9UGN4 299 aa0.36□□□□□ -2.35
GYPB-209ENST00000508618 AK3Q9UIJ7 227 aa0.36□□□□□ -2.35
GYPB-209ENST00000508618 SNURFQ9Y675 71 aa0.36□□□□□ -2.35
GYPB-209ENST00000508618 PTPRBP23467 1997 aa0.36□□□□□ -2.35
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms