RNA–Protein interactions for RNA: ENST00000492954.1

PTPRU-207, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 2

Gene PTPRU, Length 625 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-207ENST00000492954 MRPS7Q9Y2R9 242 aaKnown RBP13.86□□□□□ -0.19
PTPRU-207ENST00000492954 TNCP24821 2201 aa13.85□□□□□ -0.19
PTPRU-207ENST00000492954 AIREO43918 545 aa13.85□□□□□ -0.19
PTPRU-207ENST00000492954 LSM3P62310 102 aaKnown RBP13.85□□□□□ -0.19
PTPRU-207ENST00000492954 CDK10Q15131 360 aa13.85□□□□□ -0.19
PTPRU-207ENST00000492954 C10orf55Q5SWW7 151 aa13.85□□□□□ -0.19
PTPRU-207ENST00000492954 ADAD2Q8NCV1 583 aaKnown RBP13.85□□□□□ -0.19
PTPRU-207ENST00000492954 TSPAN14Q8NG11 270 aa13.85□□□□□ -0.19
PTPRU-207ENST00000492954 TCTEX1D2Q8WW35 142 aa13.85□□□□□ -0.19
PTPRU-207ENST00000492954 SRSF12Q8WXF0 261 aaKnown RBP13.85□□□□□ -0.19
PTPRU-207ENST00000492954 HSD17B10Q99714 261 aaKnown RBP13.85□□□□□ -0.19
PTPRU-207ENST00000492954 TAS2R8Q9NYW2 309 aa13.85□□□□□ -0.19
PTPRU-207ENST00000492954 A0A087WXM4 84 aa13.84□□□□□ -0.19
PTPRU-207ENST00000492954 A0A0G2JLM5 398 aa13.84□□□□□ -0.19
PTPRU-207ENST00000492954 ANKRD34BA5PLL1 514 aa13.84□□□□□ -0.19
PTPRU-207ENST00000492954 TMEM127O75204 238 aa13.84□□□□□ -0.19
PTPRU-207ENST00000492954 RBMXL2O75526 392 aaKnown RBP13.84□□□□□ -0.19
PTPRU-207ENST00000492954 TNFAIP8O95379 198 aa13.84□□□□□ -0.19
PTPRU-207ENST00000492954 BRI3O95415 125 aa13.84□□□□□ -0.19
PTPRU-207ENST00000492954 OR9G9P0C7N8 305 aa13.84□□□□□ -0.19
PTPRU-207ENST00000492954 SPNP16150 400 aa13.84□□□□□ -0.19
PTPRU-207ENST00000492954 AADACP22760 399 aa13.84□□□□□ -0.19
PTPRU-207ENST00000492954 FCGR2CP31995 323 aa13.84□□□□□ -0.19
PTPRU-207ENST00000492954 RPS19P39019 145 aaKnown RBP13.84□□□□□ -0.19
PTPRU-207ENST00000492954 VKORC1L1Q8N0U8 176 aa13.84□□□□□ -0.19
PTPRU-207ENST00000492954 OR13F1Q8NGS4 319 aa13.84□□□□□ -0.19
PTPRU-207ENST00000492954 SNAPC3Q92966 411 aa13.84□□□□□ -0.19
PTPRU-207ENST00000492954 RANGRFQ9HD47 186 aaPredicted RBP13.84□□□□□ -0.19
PTPRU-207ENST00000492954 VCX3AQ9NNX9 186 aa13.84□□□□□ -0.19
PTPRU-207ENST00000492954 MEIS3P1A6NDR6 274 aa13.83□□□□□ -0.2
PTPRU-207ENST00000492954 MPPED1O15442 326 aa13.83□□□□□ -0.2
PTPRU-207ENST00000492954 CREBL2O60519 120 aaPredicted RBP13.83□□□□□ -0.2
PTPRU-207ENST00000492954 ACTL6BO94805 426 aa13.83□□□□□ -0.2
PTPRU-207ENST00000492954 BRWD1-AS2P59051 145 aa13.83□□□□□ -0.2
PTPRU-207ENST00000492954 DYRK1AQ13627 763 aa13.83□□□□□ -0.2
PTPRU-207ENST00000492954 MMD2Q8IY49 270 aa13.83□□□□□ -0.2
PTPRU-207ENST00000492954 MFSD4AQ8N468 514 aa13.83□□□□□ -0.2
PTPRU-207ENST00000492954 OR4S2Q8NH73 311 aa13.83□□□□□ -0.2
PTPRU-207ENST00000492954 SECTM1Q8WVN6 248 aa13.83□□□□□ -0.2
PTPRU-207ENST00000492954 SORL1Q92673 2214 aa13.83□□□□□ -0.2
PTPRU-207ENST00000492954 TNFSF12O43508 249 aa13.82□□□□□ -0.2
PTPRU-207ENST00000492954 XRCC3O43542 346 aa13.82□□□□□ -0.2
PTPRU-207ENST00000492954 PPYP01298 95 aa13.82□□□□□ -0.2
PTPRU-207ENST00000492954 PRH1P02810 166 aa13.82□□□□□ -0.2
PTPRU-207ENST00000492954 ZP3P21754 424 aa13.82□□□□□ -0.2
PTPRU-207ENST00000492954 ZNF66Q6ZN08 573 aa13.82□□□□□ -0.2
PTPRU-207ENST00000492954 HAPLN4Q86UW8 402 aa13.82□□□□□ -0.2
PTPRU-207ENST00000492954 CROCCP3Q8IVE0 287 aa13.82□□□□□ -0.2
PTPRU-207ENST00000492954 OR6Q1Q8NGQ2 317 aa13.82□□□□□ -0.2
PTPRU-207ENST00000492954 OR4C12Q96R67 309 aa13.82□□□□□ -0.2
PTPRU-207ENST00000492954 CCL28Q9NRJ3 127 aa13.82□□□□□ -0.2
PTPRU-207ENST00000492954 TRBV12-3P01733 135 aa13.81□□□□□ -0.2
PTPRU-207ENST00000492954 CBX5P45973 191 aa13.81□□□□□ -0.2
PTPRU-207ENST00000492954 UBE2NLQ5JXB2 153 aa13.81□□□□□ -0.2
PTPRU-207ENST00000492954 ZNF343Q6P1L6 599 aa13.81□□□□□ -0.2
PTPRU-207ENST00000492954 SAMD12Q8N8I0 201 aa13.81□□□□□ -0.2
PTPRU-207ENST00000492954 S100A16Q96FQ6 103 aaKnown RBP13.81□□□□□ -0.2
PTPRU-207ENST00000492954 USMG5Q96IX5 58 aa13.81□□□□□ -0.2
PTPRU-207ENST00000492954 SPIN2AQ99865 258 aa13.81□□□□□ -0.2
PTPRU-207ENST00000492954 ASCL2Q99929 193 aa13.81□□□□□ -0.2
PTPRU-207ENST00000492954 SPIN2BQ9BPZ2 258 aa13.81□□□□□ -0.2
PTPRU-207ENST00000492954 ELOVL1Q9BW60 279 aa13.81□□□□□ -0.2
PTPRU-207ENST00000492954 SLC5A7Q9GZV3 580 aa13.81□□□□□ -0.2
PTPRU-207ENST00000492954 SMAD5-AS1Q9Y6J3 95 aa13.81□□□□□ -0.2
PTPRU-207ENST00000492954 TENM3Q9P273 2699 aa13.81□□□□□ -0.2
PTPRU-207ENST00000492954 KBTBD11O94819 623 aa13.8□□□□□ -0.2
PTPRU-207ENST00000492954 OR2A4O95047 310 aa13.8□□□□□ -0.2
PTPRU-207ENST00000492954 NHLRC4P0CG21 123 aaPredicted RBP13.8□□□□□ -0.2
PTPRU-207ENST00000492954 GP9P14770 177 aa13.8□□□□□ -0.2
PTPRU-207ENST00000492954 FXYD4P59646 89 aa13.8□□□□□ -0.2
PTPRU-207ENST00000492954 RHOGP84095 191 aa13.8□□□□□ -0.2
PTPRU-207ENST00000492954 KLF5Q13887 457 aaPredicted RBP13.8□□□□□ -0.2
PTPRU-207ENST00000492954 MSMO1Q15800 293 aa13.8□□□□□ -0.2
PTPRU-207ENST00000492954 SSX9Q7RTT3 188 aa13.8□□□□□ -0.2
PTPRU-207ENST00000492954 PUSL1Q8N0Z8 303 aaKnown RBP13.8□□□□□ -0.2
PTPRU-207ENST00000492954 OR5AP2Q8NGF4 316 aa13.8□□□□□ -0.2
PTPRU-207ENST00000492954 OR2A7Q96R45 310 aa13.8□□□□□ -0.2
PTPRU-207ENST00000492954 RSRP1Q9BUV0 290 aa13.8□□□□□ -0.2
PTPRU-207ENST00000492954 AKIP1Q9NQ31 210 aa13.8□□□□□ -0.2
PTPRU-207ENST00000492954 IFT46Q9NQC8 304 aa13.8□□□□□ -0.2
PTPRU-207ENST00000492954 PEF1Q9UBV8 284 aaKnown RBP13.8□□□□□ -0.2
PTPRU-207ENST00000492954 ADAM30Q9UKF2 790 aa13.8□□□□□ -0.2
PTPRU-207ENST00000492954 HMX3A6NHT5 357 aa13.79□□□□□ -0.2
PTPRU-207ENST00000492954 KIR2DS2P43631 304 aa13.79□□□□□ -0.2
PTPRU-207ENST00000492954 SYNJ2BPP57105 145 aa13.79□□□□□ -0.2
PTPRU-207ENST00000492954 TAS2R20P59543 309 aa13.79□□□□□ -0.2
PTPRU-207ENST00000492954 ZNF45Q02386 682 aa13.79□□□□□ -0.2
PTPRU-207ENST00000492954 TMEM69Q5SWH9 247 aa13.79□□□□□ -0.2
PTPRU-207ENST00000492954 VSTM2AQ8TAG5 236 aa13.79□□□□□ -0.2
PTPRU-207ENST00000492954 TMEM167AQ8TBQ9 72 aa13.79□□□□□ -0.2
PTPRU-207ENST00000492954 TRBV9A0A0B4J1U6 114 aa13.78□□□□□ -0.2
PTPRU-207ENST00000492954 FAM223BA6NKX1 122 aa13.78□□□□□ -0.2
PTPRU-207ENST00000492954 TRIM64CA6NLI5 447 aa13.78□□□□□ -0.2
PTPRU-207ENST00000492954 TEX22C9J3V5 150 aa13.78□□□□□ -0.2
PTPRU-207ENST00000492954 SULT1C2O00338 296 aa13.78□□□□□ -0.2
PTPRU-207ENST00000492954 EXOSC2Q13868 293 aaKnown RBP13.78□□□□□ -0.2
PTPRU-207ENST00000492954 TMEM17Q86X19 198 aa13.78□□□□□ -0.2
PTPRU-207ENST00000492954 ANKRD13BQ86YJ7 626 aa13.78□□□□□ -0.2
PTPRU-207ENST00000492954 FAM223AQ8IWN6 122 aa13.78□□□□□ -0.2
PTPRU-207ENST00000492954 TTC9CQ8N5M4 171 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 151.2 ms