RNA–Protein interactions for RNA: ENST00000480525.5

HDAC6-223, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 412 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-223ENST00000480525 CCDC71LQ8N9Z2 235 aa4.02□□□□□ -1.77
HDAC6-223ENST00000480525 OR4X2Q8NGF9 303 aa4.02□□□□□ -1.77
HDAC6-223ENST00000480525 OR5B3Q8NH48 314 aa4.02□□□□□ -1.77
HDAC6-223ENST00000480525 C5orf30Q96GV9 206 aa4.02□□□□□ -1.77
HDAC6-223ENST00000480525 RHOVQ96L33 236 aa4.02□□□□□ -1.77
HDAC6-223ENST00000480525 HARBI1Q96MB7 349 aa4.02□□□□□ -1.77
HDAC6-223ENST00000480525 ZNF2Q9BSG1 426 aaPredicted RBP4.02□□□□□ -1.77
HDAC6-223ENST00000480525 THAP7Q9BT49 309 aaPredicted RBP4.02□□□□□ -1.77
HDAC6-223ENST00000480525 SLC5A7Q9GZV3 580 aa4.02□□□□□ -1.77
HDAC6-223ENST00000480525 OR51J1Q9H342 316 aa4.02□□□□□ -1.77
HDAC6-223ENST00000480525 SLC2A9Q9NRM0 540 aa4.02□□□□□ -1.77
HDAC6-223ENST00000480525 FKBP11Q9NYL4 201 aa4.02□□□□□ -1.77
HDAC6-223ENST00000480525 COPZ2Q9P299 210 aa4.02□□□□□ -1.77
HDAC6-223ENST00000480525 ZNF257Q9Y2Q1 563 aa4.02□□□□□ -1.77
HDAC6-223ENST00000480525 RBM7Q9Y580 266 aaKnown RBP4.02□□□□□ -1.77
HDAC6-223ENST00000480525 NUBP2Q9Y5Y2 271 aa4.02□□□□□ -1.77
HDAC6-223ENST00000480525 VWFP04275 2813 aa4.02□□□□□ -1.77
HDAC6-223ENST00000480525 IGHV7-81A0A0B4J1V7 117 aa4.01□□□□□ -1.77
HDAC6-223ENST00000480525 H7C2Y5 167 aa4.01□□□□□ -1.77
HDAC6-223ENST00000480525 M0QZ24 198 aa4.01□□□□□ -1.77
HDAC6-223ENST00000480525 SHOXO15266 292 aa4.01□□□□□ -1.77
HDAC6-223ENST00000480525 WIPF1O43516 503 aa4.01□□□□□ -1.77
HDAC6-223ENST00000480525 PGLYRP1O75594 196 aaPredicted RBP4.01□□□□□ -1.77
HDAC6-223ENST00000480525 OR2A4O95047 310 aa4.01□□□□□ -1.77
HDAC6-223ENST00000480525 DUS4LO95620 317 aaKnown RBP4.01□□□□□ -1.77
HDAC6-223ENST00000480525 LY86O95711 162 aa4.01□□□□□ -1.77
HDAC6-223ENST00000480525 UCP1P25874 307 aa4.01□□□□□ -1.77
HDAC6-223ENST00000480525 PSMB8P28062 276 aa4.01□□□□□ -1.77
HDAC6-223ENST00000480525 HLA-DMAP28067 261 aa4.01□□□□□ -1.77
HDAC6-223ENST00000480525 CDX1P47902 265 aaPredicted RBP4.01□□□□□ -1.77
HDAC6-223ENST00000480525 REG1BP48304 166 aa4.01□□□□□ -1.77
HDAC6-223ENST00000480525 MECP2P51608 486 aaKnown RBP4.01□□□□□ -1.77
HDAC6-223ENST00000480525 BRWD1-AS2P59051 145 aa4.01□□□□□ -1.77
HDAC6-223ENST00000480525 BLCAPP62952 87 aa4.01□□□□□ -1.77
HDAC6-223ENST00000480525 SRPXP78539 464 aa4.01□□□□□ -1.77
HDAC6-223ENST00000480525 DGCR2P98153 550 aa4.01□□□□□ -1.77
HDAC6-223ENST00000480525 DHODHQ02127 395 aa4.01□□□□□ -1.77
HDAC6-223ENST00000480525 PRB3Q04118 309 aaPredicted RBP4.01□□□□□ -1.77
HDAC6-223ENST00000480525 RBMS2Q15434 407 aaKnown RBP4.01□□□□□ -1.77
HDAC6-223ENST00000480525 LY6EQ16553 131 aa4.01□□□□□ -1.77
HDAC6-223ENST00000480525 PRSS8Q16651 343 aa4.01□□□□□ -1.77
HDAC6-223ENST00000480525 C2orf68Q2NKX9 166 aa4.01□□□□□ -1.77
HDAC6-223ENST00000480525 ABCA11PQ4W5N1 156 aa4.01□□□□□ -1.77
HDAC6-223ENST00000480525 FAM53AQ6NSI3 398 aaPredicted RBP4.01□□□□□ -1.77
HDAC6-223ENST00000480525 SLC25A42Q86VD7 318 aa4.01□□□□□ -1.77
HDAC6-223ENST00000480525 TMEM219Q86XT9 240 aa4.01□□□□□ -1.77
HDAC6-223ENST00000480525 MRPL41Q8IXM3 137 aaKnown RBP4.01□□□□□ -1.77
HDAC6-223ENST00000480525 TOMM5Q8N4H5 51 aa4.01□□□□□ -1.77
HDAC6-223ENST00000480525 KLHDC1Q8N7A1 406 aa4.01□□□□□ -1.77
HDAC6-223ENST00000480525 LRTM2Q8N967 370 aa4.01□□□□□ -1.77
HDAC6-223ENST00000480525 OR4C16Q8NGL9 310 aa4.01□□□□□ -1.77
HDAC6-223ENST00000480525 OR1L6Q8NGR2 347 aa4.01□□□□□ -1.77
HDAC6-223ENST00000480525 UBALD1Q8TB05 177 aa4.01□□□□□ -1.77
HDAC6-223ENST00000480525 MAFIPQ8WZ33 124 aa4.01□□□□□ -1.77
HDAC6-223ENST00000480525 CYYR1Q96J86 154 aa4.01□□□□□ -1.77
HDAC6-223ENST00000480525 UBE2E2Q96LR5 201 aa4.01□□□□□ -1.77
HDAC6-223ENST00000480525 OR2A7Q96R45 310 aa4.01□□□□□ -1.77
HDAC6-223ENST00000480525 SPIN2AQ99865 258 aa4.01□□□□□ -1.77
HDAC6-223ENST00000480525 SPIN2BQ9BPZ2 258 aa4.01□□□□□ -1.77
HDAC6-223ENST00000480525 DCUN1D5Q9BTE7 237 aa4.01□□□□□ -1.77
HDAC6-223ENST00000480525 WDR12Q9GZL7 423 aaKnown RBP4.01□□□□□ -1.77
HDAC6-223ENST00000480525 FXYD6Q9H0Q3 95 aa4.01□□□□□ -1.77
HDAC6-223ENST00000480525 ALX4Q9H161 411 aaPredicted RBP4.01□□□□□ -1.77
HDAC6-223ENST00000480525 AKIP1Q9NQ31 210 aa4.01□□□□□ -1.77
HDAC6-223ENST00000480525 COA4Q9NYJ1 87 aa4.01□□□□□ -1.77
HDAC6-223ENST00000480525 GPR132Q9UNW8 380 aa4.01□□□□□ -1.77
HDAC6-223ENST00000480525 TSSC4Q9Y5U2 329 aaPredicted RBP4.01□□□□□ -1.77
HDAC6-223ENST00000480525 PSMB11A5LHX3 300 aa4□□□□□ -1.77
HDAC6-223ENST00000480525 CRYM-AS1A6NIL9 109 aa4□□□□□ -1.77
HDAC6-223ENST00000480525 MARCH11A6NNE9 402 aa4□□□□□ -1.77
HDAC6-223ENST00000480525 NCBP2LA6PVI3 153 aaKnown RBP4□□□□□ -1.77
HDAC6-223ENST00000480525 NPIPB5A8MRT5 1133 aa4□□□□□ -1.77
HDAC6-223ENST00000480525 CENPXA8MT69 81 aa4□□□□□ -1.77
HDAC6-223ENST00000480525 MPPED1O15442 326 aa4□□□□□ -1.77
HDAC6-223ENST00000480525 CYB5BO43169 146 aa4□□□□□ -1.77
HDAC6-223ENST00000480525 PEX14O75381 377 aa4□□□□□ -1.77
HDAC6-223ENST00000480525 FBXO24O75426 580 aa4□□□□□ -1.77
HDAC6-223ENST00000480525 CDS2O95674 445 aa4□□□□□ -1.77
HDAC6-223ENST00000480525 CRYZL1O95825 349 aa4□□□□□ -1.77
HDAC6-223ENST00000480525 DHFRP00374 187 aa4□□□□□ -1.77
HDAC6-223ENST00000480525 IGHV3-7P01780 117 aa4□□□□□ -1.77
HDAC6-223ENST00000480525 CRYGCP07315 174 aa4□□□□□ -1.77
HDAC6-223ENST00000480525 P0C879 139 aa4□□□□□ -1.77
HDAC6-223ENST00000480525 SLC25A6P12236 298 aa4□□□□□ -1.77
HDAC6-223ENST00000480525 PTHLHP12272 177 aa4□□□□□ -1.77
HDAC6-223ENST00000480525 VDAC1P21796 283 aa4□□□□□ -1.77
HDAC6-223ENST00000480525 PPP5CP53041 499 aa4□□□□□ -1.77
HDAC6-223ENST00000480525 F2RL1P55085 397 aa4□□□□□ -1.77
HDAC6-223ENST00000480525 ATP5IP56385 69 aaPredicted RBP4□□□□□ -1.77
HDAC6-223ENST00000480525 RPS16P62249 146 aaKnown RBP4□□□□□ -1.77
HDAC6-223ENST00000480525 CX3CL1P78423 397 aa4□□□□□ -1.77
HDAC6-223ENST00000480525 SSBP2P81877 361 aaPredicted RBP4□□□□□ -1.77
HDAC6-223ENST00000480525 FHL3Q13643 280 aa4□□□□□ -1.77
HDAC6-223ENST00000480525 MRGPRG-AS1Q2M3A8 158 aa4□□□□□ -1.77
HDAC6-223ENST00000480525 TMEM128Q5BJH2 165 aa4□□□□□ -1.77
HDAC6-223ENST00000480525 SPAG16Q8N0X2 631 aa4□□□□□ -1.77
HDAC6-223ENST00000480525 TTC9CQ8N5M4 171 aa4□□□□□ -1.77
HDAC6-223ENST00000480525 ZNF114Q8NC26 417 aa4□□□□□ -1.77
HDAC6-223ENST00000480525 WFDC9Q8NEX5 89 aa4□□□□□ -1.77
HDAC6-223ENST00000480525 OR4F17Q8NGA8 305 aa4□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 86.7 ms