RNA–Protein interactions for RNA: ENST00000462335.1

PKP4-208, Transcript of plakophilin 4, humanhuman

TSL 4

Gene PKP4, Length 561 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-208ENST00000462335 SERPINE2P07093 398 aa7.55□□□□□ -1.2
PKP4-208ENST00000462335 ELANEP08246 267 aa7.55□□□□□ -1.2
PKP4-208ENST00000462335 AKAIN1P0CW23 69 aa7.55□□□□□ -1.2
PKP4-208ENST00000462335 CHRNA7P36544 502 aa7.55□□□□□ -1.2
PKP4-208ENST00000462335 ECI1P42126 302 aa7.55□□□□□ -1.2
PKP4-208ENST00000462335 RAB25P57735 213 aa7.55□□□□□ -1.2
PKP4-208ENST00000462335 UBE2KP61086 200 aa7.55□□□□□ -1.2
PKP4-208ENST00000462335 FOXE3Q13461 319 aa7.55□□□□□ -1.2
PKP4-208ENST00000462335 PRR31Q5SQ13 230 aa7.55□□□□□ -1.2
PKP4-208ENST00000462335 VAX1Q5SQQ9 334 aa7.55□□□□□ -1.2
PKP4-208ENST00000462335 ZNF818PQ6ZRF7 136 aa7.55□□□□□ -1.2
PKP4-208ENST00000462335 SSX9Q7RTT3 188 aa7.55□□□□□ -1.2
PKP4-208ENST00000462335 MMD2Q8IY49 270 aa7.55□□□□□ -1.2
PKP4-208ENST00000462335 ARRDC1Q8N5I2 433 aa7.55□□□□□ -1.2
PKP4-208ENST00000462335 TCTEX1D1Q8N7M0 179 aa7.55□□□□□ -1.2
PKP4-208ENST00000462335 CCDC71LQ8N9Z2 235 aa7.55□□□□□ -1.2
PKP4-208ENST00000462335 KLHL30-AS1Q8NEE0 82 aa7.55□□□□□ -1.2
PKP4-208ENST00000462335 SCGB3A2Q96PL1 93 aa7.55□□□□□ -1.2
PKP4-208ENST00000462335 OR2A7Q96R45 310 aa7.55□□□□□ -1.2
PKP4-208ENST00000462335 COPZ2Q9P299 210 aa7.55□□□□□ -1.2
PKP4-208ENST00000462335 SCP2D1Q9UJQ7 156 aa7.55□□□□□ -1.2
PKP4-208ENST00000462335 ANAPC10Q9UM13 185 aa7.55□□□□□ -1.2
PKP4-208ENST00000462335 C14orf166Q9Y224 244 aaKnown RBP7.55□□□□□ -1.2
PKP4-208ENST00000462335 FOXA2Q9Y261 457 aaPredicted RBP7.55□□□□□ -1.2
PKP4-208ENST00000462335 IGHV7-81A0A0B4J1V7 117 aa7.54□□□□□ -1.2
PKP4-208ENST00000462335 FCN1O00602 326 aa7.54□□□□□ -1.2
PKP4-208ENST00000462335 RBMXL2O75526 392 aaKnown RBP7.54□□□□□ -1.2
PKP4-208ENST00000462335 PGLYRP1O75594 196 aaPredicted RBP7.54□□□□□ -1.2
PKP4-208ENST00000462335 ATG12O94817 140 aa7.54□□□□□ -1.2
PKP4-208ENST00000462335 HPRT1P00492 218 aa7.54□□□□□ -1.2
PKP4-208ENST00000462335 NQO2P16083 231 aa7.54□□□□□ -1.2
PKP4-208ENST00000462335 CD33P20138 364 aa7.54□□□□□ -1.2
PKP4-208ENST00000462335 SLC6A1P30531 599 aa7.54□□□□□ -1.2
PKP4-208ENST00000462335 GNRHRP30968 328 aa7.54□□□□□ -1.2
PKP4-208ENST00000462335 PPP5CP53041 499 aa7.54□□□□□ -1.2
PKP4-208ENST00000462335 RPL30P62888 115 aaKnown RBP7.54□□□□□ -1.2
PKP4-208ENST00000462335 CD83Q01151 205 aa7.54□□□□□ -1.2
PKP4-208ENST00000462335 ZNF57Q68EA5 555 aaPredicted RBP7.54□□□□□ -1.2
PKP4-208ENST00000462335 HIST2H2BDQ6DRA6 164 aa7.54□□□□□ -1.2
PKP4-208ENST00000462335 IDO2Q6ZQW0 420 aa7.54□□□□□ -1.2
PKP4-208ENST00000462335 Q8N402 240 aa7.54□□□□□ -1.2
PKP4-208ENST00000462335 LFNGQ8NES3 379 aa7.54□□□□□ -1.2
PKP4-208ENST00000462335 TERB2Q8NHR7 220 aa7.54□□□□□ -1.2
PKP4-208ENST00000462335 RNASE11Q8TAA1 199 aaKnown RBP7.54□□□□□ -1.2
PKP4-208ENST00000462335 SMIM4Q8WVI0 70 aa7.54□□□□□ -1.2
PKP4-208ENST00000462335 DPF1Q92782 380 aa7.54□□□□□ -1.2
PKP4-208ENST00000462335 RHOVQ96L33 236 aa7.54□□□□□ -1.2
PKP4-208ENST00000462335 TMEM68Q96MH6 324 aa7.54□□□□□ -1.2
PKP4-208ENST00000462335 GPHA2Q96T91 129 aa7.54□□□□□ -1.2
PKP4-208ENST00000462335 SPIN2AQ99865 258 aa7.54□□□□□ -1.2
PKP4-208ENST00000462335 PRRT1Q99946 306 aa7.54□□□□□ -1.2
PKP4-208ENST00000462335 SPIN2BQ9BPZ2 258 aa7.54□□□□□ -1.2
PKP4-208ENST00000462335 THAP7Q9BT49 309 aaPredicted RBP7.54□□□□□ -1.2
PKP4-208ENST00000462335 TINAGL1Q9GZM7 467 aaPredicted RBP7.54□□□□□ -1.2
PKP4-208ENST00000462335 TENM1Q9UKZ4 2725 aa7.53□□□□□ -1.2
PKP4-208ENST00000462335 TEX13DA0A0J9YY54 714 aaPredicted RBP7.53□□□□□ -1.2
PKP4-208ENST00000462335 C13orf42A0A1B0GVH6 325 aa7.53□□□□□ -1.2
PKP4-208ENST00000462335 MSGN1A6NI15 193 aa7.53□□□□□ -1.2
PKP4-208ENST00000462335 G3V318 75 aa7.53□□□□□ -1.2
PKP4-208ENST00000462335 CYB5BO43169 146 aa7.53□□□□□ -1.2
PKP4-208ENST00000462335 GSTZ1O43708 216 aaPredicted RBP7.53□□□□□ -1.2
PKP4-208ENST00000462335 TSPAN15O95858 294 aa7.53□□□□□ -1.2
PKP4-208ENST00000462335 IGHG4P01861 327 aa7.53□□□□□ -1.2
PKP4-208ENST00000462335 F2RP25116 425 aa7.53□□□□□ -1.2
PKP4-208ENST00000462335 PTBP1P26599 531 aaKnown RBP eCLIP7.53□□□□□ -1.29e-7■■■■■ 35.5
PKP4-208ENST00000462335 LPAR6P43657 344 aa7.53□□□□□ -1.2
PKP4-208ENST00000462335 UCP3P55916 312 aa7.53□□□□□ -1.2
PKP4-208ENST00000462335 TAS2R31P59538 309 aa7.53□□□□□ -1.2
PKP4-208ENST00000462335 RPL23AP62750 156 aaKnown RBP7.53□□□□□ -1.2
PKP4-208ENST00000462335 PRSS8Q16651 343 aa7.53□□□□□ -1.2
PKP4-208ENST00000462335 AKIRIN2Q53H80 203 aa7.53□□□□□ -1.2
PKP4-208ENST00000462335 TRIQKQ629K1 86 aa7.53□□□□□ -1.2
PKP4-208ENST00000462335 C10orf99Q6UWK7 81 aa7.53□□□□□ -1.2
PKP4-208ENST00000462335 TBC1D26Q86UD7 250 aa7.53□□□□□ -1.2
PKP4-208ENST00000462335 SLC25A42Q86VD7 318 aa7.53□□□□□ -1.2
PKP4-208ENST00000462335 ZNF695Q8IW36 515 aa7.53□□□□□ -1.2
PKP4-208ENST00000462335 VKORC1L1Q8N0U8 176 aa7.53□□□□□ -1.2
PKP4-208ENST00000462335 TOMM5Q8N4H5 51 aa7.53□□□□□ -1.2
PKP4-208ENST00000462335 OR5T1Q8NG75 326 aa7.53□□□□□ -1.2
PKP4-208ENST00000462335 OR5M8Q8NGP6 311 aa7.53□□□□□ -1.2
PKP4-208ENST00000462335 OR4A5Q8NH83 315 aa7.53□□□□□ -1.2
PKP4-208ENST00000462335 DDB2Q92466 427 aa7.53□□□□□ -1.2
PKP4-208ENST00000462335 C5orf30Q96GV9 206 aa7.53□□□□□ -1.2
PKP4-208ENST00000462335 ZNF486Q96H40 463 aaPredicted RBP7.53□□□□□ -1.2
PKP4-208ENST00000462335 MS4A10Q96PG2 267 aa7.53□□□□□ -1.2
PKP4-208ENST00000462335 FYTTD1Q96QD9 318 aaKnown RBP7.53□□□□□ -1.2
PKP4-208ENST00000462335 FAM103A1Q9BTL3 118 aaKnown RBP7.53□□□□□ -1.2
PKP4-208ENST00000462335 COMMD5Q9GZQ3 224 aa7.53□□□□□ -1.2
PKP4-208ENST00000462335 NXF2Q9GZY0 626 aaKnown RBP7.53□□□□□ -1.2
PKP4-208ENST00000462335 COA4Q9NYJ1 87 aa7.53□□□□□ -1.2
PKP4-208ENST00000462335 SRRM4A7MD48 611 aaKnown RBP7.52□□□□□ -1.21
PKP4-208ENST00000462335 CENPXA8MT69 81 aa7.52□□□□□ -1.21
PKP4-208ENST00000462335 RBFOX2O43251 390 aaKnown RBP eCLIP7.52□□□□□ -1.21
PKP4-208ENST00000462335 DHFRP00374 187 aa7.52□□□□□ -1.21
PKP4-208ENST00000462335 KRASP01116 189 aa7.52□□□□□ -1.21
PKP4-208ENST00000462335 IGLV2-14P01704 120 aa7.52□□□□□ -1.21
PKP4-208ENST00000462335 TRGV3P03979 118 aa7.52□□□□□ -1.21
PKP4-208ENST00000462335 RPLP1P05386 114 aaKnown RBP7.52□□□□□ -1.21
PKP4-208ENST00000462335 SAA1P0DJI8 122 aaPredicted RBP7.52□□□□□ -1.21
PKP4-208ENST00000462335 DEFA4P12838 97 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms