RNA–Protein interactions for RNA: ENST00000445265.6

TCOF1-206, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 4,825 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-206ENST00000445265 TCAPO15273 167 aa14.07□□□□□ -0.16
TCOF1-206ENST00000445265 TMEM30BQ3MIR4 351 aa14.07□□□□□ -0.16
TCOF1-206ENST00000445265 DIRC2Q96SL1 478 aa14.07□□□□□ -0.16
TCOF1-206ENST00000445265 PPP1R14DQ9NXH3 145 aa14.07□□□□□ -0.16
TCOF1-206ENST00000445265 IQCF6A8MYZ5 107 aa14.06□□□□□ -0.16
TCOF1-206ENST00000445265 SELENOTP62341 195 aa14.06□□□□□ -0.16
TCOF1-206ENST00000445265 OR5I1Q13606 314 aa14.06□□□□□ -0.16
TCOF1-206ENST00000445265 ELOBQ15370 118 aa14.06□□□□□ -0.16
TCOF1-206ENST00000445265 ASCL4Q6XD76 172 aa14.06□□□□□ -0.16
TCOF1-206ENST00000445265 PI4KAP42356 2102 aa14.06□□□□□ -0.16
TCOF1-206ENST00000445265 C5orf52A6NGY3 159 aa14.06□□□□□ -0.16
TCOF1-206ENST00000445265 NEURL1O76050 574 aa14.06□□□□□ -0.16
TCOF1-206ENST00000445265 CSRP1P21291 193 aaKnown RBP14.06□□□□□ -0.16
TCOF1-206ENST00000445265 HEPN1Q6WQI6 88 aa14.06□□□□□ -0.16
TCOF1-206ENST00000445265 ZNF497Q6ZNH5 498 aa14.06□□□□□ -0.16
TCOF1-206ENST00000445265 WDFY1Q8IWB7 410 aa14.06□□□□□ -0.16
TCOF1-206ENST00000445265 ABHD12Q8N2K0 398 aa14.06□□□□□ -0.16
TCOF1-206ENST00000445265 MS4A5Q9H3V2 200 aa14.06□□□□□ -0.16
TCOF1-206ENST00000445265 SSX8Q7RTT4 187 aa14.06□□□□□ -0.16
TCOF1-206ENST00000445265 SSX7Q7RTT5 188 aa14.06□□□□□ -0.16
TCOF1-206ENST00000445265 NAGKQ9UJ70 344 aa14.06□□□□□ -0.16
TCOF1-206ENST00000445265 TOX4O94842 621 aa14.06□□□□□ -0.16
TCOF1-206ENST00000445265 LYZP61626 148 aa14.06□□□□□ -0.16
TCOF1-206ENST00000445265 NMSQ5H8A3 153 aa14.06□□□□□ -0.16
TCOF1-206ENST00000445265 C1orf185Q5T7R7 199 aa14.06□□□□□ -0.16
TCOF1-206ENST00000445265 ZDHHC16Q969W1 377 aa14.06□□□□□ -0.16
TCOF1-206ENST00000445265 PAXXQ9BUH6 204 aa14.06□□□□□ -0.16
TCOF1-206ENST00000445265 GNB4Q9HAV0 340 aa14.06□□□□□ -0.16
TCOF1-206ENST00000445265 THADAQ6YHU6 1953 aa14.06□□□□□ -0.16
TCOF1-206ENST00000445265 TICRRQ7Z2Z1 1910 aa14.05□□□□□ -0.16
TCOF1-206ENST00000445265 PPIAL4EA0A075B759 164 aa14.05□□□□□ -0.16
TCOF1-206ENST00000445265 TRBV23-1A0A0A0MS06 115 aa14.05□□□□□ -0.16
TCOF1-206ENST00000445265 PPIAL4DF5H284 164 aa14.05□□□□□ -0.16
TCOF1-206ENST00000445265 M0R2Z0 102 aa14.05□□□□□ -0.16
TCOF1-206ENST00000445265 APCSP02743 223 aa14.05□□□□□ -0.16
TCOF1-206ENST00000445265 PPIAL4FP0DN26 164 aa14.05□□□□□ -0.16
TCOF1-206ENST00000445265 ATP5IP56385 69 aaPredicted RBP14.05□□□□□ -0.16
TCOF1-206ENST00000445265 VAMP3Q15836 100 aa14.05□□□□□ -0.16
TCOF1-206ENST00000445265 ATP1A1-AS1Q5TC04 95 aa14.05□□□□□ -0.16
TCOF1-206ENST00000445265 C1orf162Q8NEQ5 155 aaPredicted RBP14.05□□□□□ -0.16
TCOF1-206ENST00000445265 MBD3L1Q8WWY6 194 aa14.05□□□□□ -0.16
TCOF1-206ENST00000445265 STARD4Q96DR4 205 aa14.05□□□□□ -0.16
TCOF1-206ENST00000445265 COA4Q9NYJ1 87 aa14.05□□□□□ -0.16
TCOF1-206ENST00000445265 PPIAL4AQ9Y536 164 aa14.05□□□□□ -0.16
TCOF1-206ENST00000445265 COX7A1P24310 79 aa14.05□□□□□ -0.16
TCOF1-206ENST00000445265 HTR1DP28221 377 aa14.05□□□□□ -0.16
TCOF1-206ENST00000445265 MST1LQ2TV78 715 aa14.05□□□□□ -0.16
TCOF1-206ENST00000445265 LBHQ53QV2 105 aaPredicted RBP14.05□□□□□ -0.16
TCOF1-206ENST00000445265 RNF166Q96A37 237 aaPredicted RBP14.05□□□□□ -0.16
TCOF1-206ENST00000445265 IDI2-AS1Q9NZ38 188 aa14.05□□□□□ -0.16
TCOF1-206ENST00000445265 LNP1A1A4G5 178 aa14.05□□□□□ -0.16
TCOF1-206ENST00000445265 P01737 135 aa14.05□□□□□ -0.16
TCOF1-206ENST00000445265 CEACAM1P13688 526 aa14.05□□□□□ -0.16
TCOF1-206ENST00000445265 CCL8P80075 99 aa14.05□□□□□ -0.16
TCOF1-206ENST00000445265 SPNS3Q6ZMD2 512 aa14.05□□□□□ -0.16
TCOF1-206ENST00000445265 ONECUT1Q9UBC0 465 aa14.05□□□□□ -0.16
TCOF1-206ENST00000445265 TRAV1-1A0A0B4J248 108 aa14.04□□□□□ -0.16
TCOF1-206ENST00000445265 PINLYPA6NC86 204 aa14.04□□□□□ -0.16
TCOF1-206ENST00000445265 HIST1H1BP16401 226 aaKnown RBP14.04□□□□□ -0.16
TCOF1-206ENST00000445265 VN1R17PQ8TDU5 208 aa14.04□□□□□ -0.16
TCOF1-206ENST00000445265 SFRP2Q96HF1 295 aa14.04□□□□□ -0.16
TCOF1-206ENST00000445265 ZNF714Q96N38 554 aa14.04□□□□□ -0.16
TCOF1-206ENST00000445265 C19orf24Q9BVV8 132 aa14.04□□□□□ -0.16
TCOF1-206ENST00000445265 ZDHHC8Q9ULC8 765 aa14.04□□□□□ -0.16
TCOF1-206ENST00000445265 CEACAM3P40198 252 aa14.04□□□□□ -0.16
TCOF1-206ENST00000445265 RPL8P62917 257 aaKnown RBP14.04□□□□□ -0.16
TCOF1-206ENST00000445265 Q6ZS49 121 aa14.04□□□□□ -0.16
TCOF1-206ENST00000445265 PAM16Q9Y3D7 125 aa14.04□□□□□ -0.16
TCOF1-206ENST00000445265 SP9P0CG40 484 aa14.04□□□□□ -0.16
TCOF1-206ENST00000445265 Q6ZN92 141 aa14.04□□□□□ -0.16
TCOF1-206ENST00000445265 LRRK1Q38SD2 2015 aa14.04□□□□□ -0.16
TCOF1-206ENST00000445265 CNOT1A5YKK6 2376 aaKnown RBP14.04□□□□□ -0.16
TCOF1-206ENST00000445265 ISLRO14498 428 aa14.04□□□□□ -0.16
TCOF1-206ENST00000445265 ZNF146Q15072 292 aa14.04□□□□□ -0.16
TCOF1-206ENST00000445265 HSPB9Q9BQS6 159 aa14.04□□□□□ -0.16
TCOF1-206ENST00000445265 CECR9P0C854 216 aa14.03□□□□□ -0.16
TCOF1-206ENST00000445265 LINC00869P0C866 280 aa14.03□□□□□ -0.16
TCOF1-206ENST00000445265 TFF3Q07654 80 aa14.03□□□□□ -0.16
TCOF1-206ENST00000445265 OR8I2Q8N0Y5 310 aa14.03□□□□□ -0.16
TCOF1-206ENST00000445265 OR13A1Q8NGR1 328 aa14.03□□□□□ -0.16
TCOF1-206ENST00000445265 WDYHV1Q96HA8 205 aa14.03□□□□□ -0.16
TCOF1-206ENST00000445265 YTHDF2Q9Y5A9 579 aaKnown RBP14.03□□□□□ -0.16
TCOF1-206ENST00000445265 LINC00587B1AMM8 73 aa14.03□□□□□ -0.16
TCOF1-206ENST00000445265 E9PLN8 166 aa14.03□□□□□ -0.16
TCOF1-206ENST00000445265 HLA-DQA1P01909 254 aa14.03□□□□□ -0.16
TCOF1-206ENST00000445265 CD3EP07766 207 aa14.03□□□□□ -0.16
TCOF1-206ENST00000445265 GCHFRP30047 84 aa14.03□□□□□ -0.16
TCOF1-206ENST00000445265 GFRA1P56159 465 aa14.03□□□□□ -0.16
TCOF1-206ENST00000445265 IBA57Q5T440 356 aaKnown RBP14.03□□□□□ -0.16
TCOF1-206ENST00000445265 VKORC1L1Q8N0U8 176 aa14.03□□□□□ -0.16
TCOF1-206ENST00000445265 INSIG2Q9Y5U4 225 aa14.03□□□□□ -0.16
TCOF1-206ENST00000445265 NCOR1O75376 2440 aa14.03□□□□□ -0.16
TCOF1-206ENST00000445265 TRAV34A0A0B4J273 112 aa14.03□□□□□ -0.16
TCOF1-206ENST00000445265 ZNF729A6NN14 1252 aaPredicted RBP14.03□□□□□ -0.16
TCOF1-206ENST00000445265 DLL1O00548 723 aa14.03□□□□□ -0.16
TCOF1-206ENST00000445265 REG1BP48304 166 aa14.03□□□□□ -0.16
TCOF1-206ENST00000445265 MFAP2P55001 183 aa14.03□□□□□ -0.16
TCOF1-206ENST00000445265 GAMTQ14353 236 aa14.03□□□□□ -0.16
TCOF1-206ENST00000445265 C1QL4Q86Z23 238 aa14.03□□□□□ -0.16
TCOF1-206ENST00000445265 MRPL18Q9H0U6 180 aaKnown RBP14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms