RNA–Protein interactions for RNA: ENST00000439128.6

NEK1-201, Transcript of NIMA related kinase 1, humanhuman

TSL 1 (best) BASIC

Gene NEK1, Length 5,653 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1-201ENST00000439128 SNURFLB1AK76 121 aa10.22□□□□□ -0.77
NEK1-201ENST00000439128 SIAH2O43255 324 aa10.22□□□□□ -0.77
NEK1-201ENST00000439128 DLX6P56179 175 aa10.22□□□□□ -0.77
NEK1-201ENST00000439128 OR13A1Q8NGR1 328 aa10.22□□□□□ -0.77
NEK1-201ENST00000439128 LHFPL5Q8TAF8 219 aa10.22□□□□□ -0.77
NEK1-201ENST00000439128 PHLDA3Q9Y5J5 127 aa10.22□□□□□ -0.77
NEK1-201ENST00000439128 NUP214P35658 2090 aaPredicted RBP10.22□□□□□ -0.77
NEK1-201ENST00000439128 CDRT15L2A8MXV6 281 aa10.22□□□□□ -0.77
NEK1-201ENST00000439128 IGHV1-46P01743 117 aa10.22□□□□□ -0.77
NEK1-201ENST00000439128 SUMO1P63165 101 aaKnown RBP10.22□□□□□ -0.77
NEK1-201ENST00000439128 C3orf36Q3SXR2 165 aa10.22□□□□□ -0.77
NEK1-201ENST00000439128 OR5AU1Q8NGC0 362 aa10.22□□□□□ -0.77
NEK1-201ENST00000439128 IGHV3OR16-8A0A075B7F1 116 aa10.22□□□□□ -0.77
NEK1-201ENST00000439128 H3BTX0 84 aa10.22□□□□□ -0.77
NEK1-201ENST00000439128 SCGB1C2P0DMR2 95 aa10.22□□□□□ -0.77
NEK1-201ENST00000439128 CX3CL1P78423 397 aa10.22□□□□□ -0.77
NEK1-201ENST00000439128 NEURL2Q9BR09 285 aa10.22□□□□□ -0.77
NEK1-201ENST00000439128 REPIN1Q9BWE0 567 aaKnown RBP10.22□□□□□ -0.77
NEK1-201ENST00000439128 MRPL20Q9BYC9 149 aaKnown RBP10.22□□□□□ -0.77
NEK1-201ENST00000439128 NINQ8N4C6 2090 aa10.22□□□□□ -0.77
NEK1-201ENST00000439128 TRBV5-5A0A0J9YX44 114 aa10.22□□□□□ -0.77
NEK1-201ENST00000439128 GCM2O75603 506 aaPredicted RBP10.22□□□□□ -0.77
NEK1-201ENST00000439128 RAB9AP51151 201 aa10.22□□□□□ -0.77
NEK1-201ENST00000439128 FAM74A4Q5TZK3 123 aa10.22□□□□□ -0.77
NEK1-201ENST00000439128 BRD3OSQ6XYD6 125 aa10.22□□□□□ -0.77
NEK1-201ENST00000439128 ZNF841Q6ZN19 808 aa10.22□□□□□ -0.77
NEK1-201ENST00000439128 C17orf82Q86X59 251 aaPredicted RBP10.22□□□□□ -0.77
NEK1-201ENST00000439128 MDS2Q8NDY4 140 aa10.22□□□□□ -0.77
NEK1-201ENST00000439128 DUX3Q96PT4 197 aa10.22□□□□□ -0.77
NEK1-201ENST00000439128 ZNF646O15015 1829 aaPredicted RBP10.22□□□□□ -0.77
NEK1-201ENST00000439128 VMO1Q7Z5L0 202 aa10.21□□□□□ -0.77
NEK1-201ENST00000439128 Q96M66 194 aa10.21□□□□□ -0.77
NEK1-201ENST00000439128 OR4A47Q6IF82 309 aa10.21□□□□□ -0.77
NEK1-201ENST00000439128 HSD17B13Q7Z5P4 300 aaPredicted RBP10.21□□□□□ -0.77
NEK1-201ENST00000439128 LINC01587Q99440 93 aa10.21□□□□□ -0.77
NEK1-201ENST00000439128 AP5S1Q9NUS5 200 aa10.21□□□□□ -0.77
NEK1-201ENST00000439128 GREB1LQ9C091 1923 aaPredicted RBP10.21□□□□□ -0.78
NEK1-201ENST00000439128 CFDP00746 253 aaPredicted RBP10.21□□□□□ -0.78
NEK1-201ENST00000439128 OR2D3Q8NGH3 330 aa10.21□□□□□ -0.78
NEK1-201ENST00000439128 FOXA2Q9Y261 457 aaPredicted RBP10.21□□□□□ -0.78
NEK1-201ENST00000439128 MELTFP08582 738 aa10.21□□□□□ -0.78
NEK1-201ENST00000439128 LRP11Q86VZ4 500 aa10.21□□□□□ -0.78
NEK1-201ENST00000439128 LINC00527Q9UJ94 153 aa10.21□□□□□ -0.78
NEK1-201ENST00000439128 COL4A6Q14031 1691 aa10.2□□□□□ -0.78
NEK1-201ENST00000439128 HKR1P10072 659 aa10.2□□□□□ -0.78
NEK1-201ENST00000439128 TMEM88Q6PEY1 159 aa10.2□□□□□ -0.78
NEK1-201ENST00000439128 ZNF525Q8N782 197 aa10.2□□□□□ -0.78
NEK1-201ENST00000439128 BMPERQ8N8U9 685 aa10.2□□□□□ -0.78
NEK1-201ENST00000439128 MRPS18AQ9NVS2 196 aaKnown RBP10.2□□□□□ -0.78
NEK1-201ENST00000439128 PSMB11A5LHX3 300 aa10.2□□□□□ -0.78
NEK1-201ENST00000439128 C12orf77C9JDV5 145 aa10.2□□□□□ -0.78
NEK1-201ENST00000439128 RNF212Q495C1 297 aa10.2□□□□□ -0.78
NEK1-201ENST00000439128 FAM159AQ6UWV7 190 aa10.2□□□□□ -0.78
NEK1-201ENST00000439128 FAM90A1Q86YD7 464 aa10.2□□□□□ -0.78
NEK1-201ENST00000439128 COMMD1Q8N668 190 aa10.2□□□□□ -0.78
NEK1-201ENST00000439128 PACRGQ96M98 296 aaPredicted RBP10.2□□□□□ -0.78
NEK1-201ENST00000439128 CDC42EP3Q9UKI2 254 aa10.2□□□□□ -0.78
NEK1-201ENST00000439128 PGPA6NDG6 321 aa10.2□□□□□ -0.78
NEK1-201ENST00000439128 NBR2O15453 112 aa10.2□□□□□ -0.78
NEK1-201ENST00000439128 AMY1AP04745 511 aa10.2□□□□□ -0.78
NEK1-201ENST00000439128 TMEM97Q5BJF2 176 aa10.2□□□□□ -0.78
NEK1-201ENST00000439128 NPIPB3Q92617 1050 aa10.2□□□□□ -0.78
NEK1-201ENST00000439128 TFF1P04155 84 aa10.2□□□□□ -0.78
NEK1-201ENST00000439128 CD1AP06126 327 aa10.2□□□□□ -0.78
NEK1-201ENST00000439128 MRPL30Q8TCC3 161 aaKnown RBP10.2□□□□□ -0.78
NEK1-201ENST00000439128 TMEM133Q9H2Q1 129 aa10.2□□□□□ -0.78
NEK1-201ENST00000439128 TCF19Q9Y242 345 aa10.2□□□□□ -0.78
NEK1-201ENST00000439128 MTCL1Q9Y4B5 1905 aaKnown RBP10.2□□□□□ -0.78
NEK1-201ENST00000439128 ARID2Q68CP9 1835 aa10.2□□□□□ -0.78
NEK1-201ENST00000439128 CRISP2P16562 243 aa10.2□□□□□ -0.78
NEK1-201ENST00000439128 HERVK_113P61574 105 aa10.2□□□□□ -0.78
NEK1-201ENST00000439128 LDLRAD2Q5SZI1 272 aa10.2□□□□□ -0.78
NEK1-201ENST00000439128 TMEM219Q86XT9 240 aa10.2□□□□□ -0.78
NEK1-201ENST00000439128 LRRC75AQ8NAA5 344 aa10.2□□□□□ -0.78
NEK1-201ENST00000439128 TMEM222Q9H0R3 208 aa10.2□□□□□ -0.78
NEK1-201ENST00000439128 HSPB7Q9UBY9 170 aa10.2□□□□□ -0.78
NEK1-201ENST00000439128 HSF4Q9ULV5 492 aa10.2□□□□□ -0.78
NEK1-201ENST00000439128 C9JCJ5 164 aa10.19□□□□□ -0.78
NEK1-201ENST00000439128 ZNF146Q15072 292 aa10.19□□□□□ -0.78
NEK1-201ENST00000439128 RSG1Q9BU20 258 aa10.19□□□□□ -0.78
NEK1-201ENST00000439128 C21orf62Q9NYP8 219 aa10.19□□□□□ -0.78
NEK1-201ENST00000439128 TRAV20A0A0B4J274 112 aa10.19□□□□□ -0.78
NEK1-201ENST00000439128 ZNF56Q15929 161 aa10.19□□□□□ -0.78
NEK1-201ENST00000439128 GPR146Q96CH1 333 aa10.19□□□□□ -0.78
NEK1-201ENST00000439128 MYOD1P15172 320 aa10.19□□□□□ -0.78
NEK1-201ENST00000439128 OR10G8Q8NGN5 311 aa10.19□□□□□ -0.78
NEK1-201ENST00000439128 TEX50A0A1B0GTY4 177 aa10.19□□□□□ -0.78
NEK1-201ENST00000439128 NPIPB9F8W1W9 429 aa10.19□□□□□ -0.78
NEK1-201ENST00000439128 TGOLN2O43493 480 aa10.19□□□□□ -0.78
NEK1-201ENST00000439128 CD81P60033 236 aa10.19□□□□□ -0.78
NEK1-201ENST00000439128 HIST1H3AP68431 136 aa10.19□□□□□ -0.78
NEK1-201ENST00000439128 SRSF7Q16629 238 aaKnown RBP eCLIP10.19□□□□□ -0.78
NEK1-201ENST00000439128 MIC13Q5XKP0 118 aa10.19□□□□□ -0.78
NEK1-201ENST00000439128 WDR25Q64LD2 544 aaPredicted RBP10.19□□□□□ -0.78
NEK1-201ENST00000439128 MRPL54Q6P161 138 aaKnown RBP10.19□□□□□ -0.78
NEK1-201ENST00000439128 GLRX5Q86SX6 157 aa10.19□□□□□ -0.78
NEK1-201ENST00000439128 MOB4Q9Y3A3 225 aa10.19□□□□□ -0.78
NEK1-201ENST00000439128 TRGV2A0A075B6R0 118 aa10.18□□□□□ -0.78
NEK1-201ENST00000439128 A6NNC1 897 aa10.18□□□□□ -0.78
NEK1-201ENST00000439128 ZNF343Q6P1L6 599 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 170.7 ms