RNA–Protein interactions for RNA: ENST00000425056.5

GPC1-203, Transcript of glypican 1, humanhuman

TSL 5

Gene GPC1, Length 1,085 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-203ENST00000425056 RHOGP84095 191 aa13.49□□□□□ -0.25
GPC1-203ENST00000425056 TATDN3Q17R31 274 aa13.49□□□□□ -0.25
GPC1-203ENST00000425056 KCTD21Q4G0X4 260 aa13.49□□□□□ -0.25
GPC1-203ENST00000425056 HACD4Q5VWC8 232 aa13.49□□□□□ -0.25
GPC1-203ENST00000425056 Q8N402 240 aa13.49□□□□□ -0.25
GPC1-203ENST00000425056 SNAPC3Q92966 411 aa13.49□□□□□ -0.25
GPC1-203ENST00000425056 SPIN2AQ99865 258 aa13.49□□□□□ -0.25
GPC1-203ENST00000425056 SPIN2BQ9BPZ2 258 aa13.49□□□□□ -0.25
GPC1-203ENST00000425056 EDA2RQ9HAV5 297 aa13.49□□□□□ -0.25
GPC1-203ENST00000425056 AKIP1Q9NQ31 210 aa13.49□□□□□ -0.25
GPC1-203ENST00000425056 OR2W1Q9Y3N9 320 aa13.49□□□□□ -0.25
GPC1-203ENST00000425056 SMIM30A4D0T7 59 aa13.48□□□□□ -0.25
GPC1-203ENST00000425056 NOTOA8MTQ0 251 aa13.48□□□□□ -0.25
GPC1-203ENST00000425056 MPPED1O15442 326 aa13.48□□□□□ -0.25
GPC1-203ENST00000425056 HLA-DQB1P01920 261 aa13.48□□□□□ -0.25
GPC1-203ENST00000425056 CTXN2P0C2S0 81 aa13.48□□□□□ -0.25
GPC1-203ENST00000425056 CD36P16671 472 aa13.48□□□□□ -0.25
GPC1-203ENST00000425056 ZNF45Q02386 682 aa13.48□□□□□ -0.25
GPC1-203ENST00000425056 EXOSC2Q13868 293 aaKnown RBP13.48□□□□□ -0.25
GPC1-203ENST00000425056 CDNFQ49AH0 187 aa13.48□□□□□ -0.25
GPC1-203ENST00000425056 KCTD9Q7L273 389 aa13.48□□□□□ -0.25
GPC1-203ENST00000425056 GTSCR1Q86UQ5 136 aa13.48□□□□□ -0.25
GPC1-203ENST00000425056 MMD2Q8IY49 270 aa13.48□□□□□ -0.25
GPC1-203ENST00000425056 ISOC1Q96CN7 298 aa13.48□□□□□ -0.25
GPC1-203ENST00000425056 DCSTAMPQ9H295 470 aa13.48□□□□□ -0.25
GPC1-203ENST00000425056 PALMDQ9NP74 551 aa13.48□□□□□ -0.25
GPC1-203ENST00000425056 RYR2Q92736 4967 aa13.48□□□□□ -0.25
GPC1-203ENST00000425056 SACSQ9NZJ4 4579 aa13.48□□□□□ -0.25
GPC1-203ENST00000425056 BMPR1BO00238 502 aa13.47□□□□□ -0.25
GPC1-203ENST00000425056 FCGR3BO75015 233 aa13.47□□□□□ -0.25
GPC1-203ENST00000425056 SLC22A5O76082 557 aa13.47□□□□□ -0.25
GPC1-203ENST00000425056 ACTL6BO94805 426 aa13.47□□□□□ -0.25
GPC1-203ENST00000425056 IGLV2-14P01704 120 aa13.47□□□□□ -0.25
GPC1-203ENST00000425056 NFYAP23511 347 aaPredicted RBP13.47□□□□□ -0.25
GPC1-203ENST00000425056 FGF9P31371 208 aaPredicted RBP13.47□□□□□ -0.25
GPC1-203ENST00000425056 C10orf55Q5SWW7 151 aa13.47□□□□□ -0.25
GPC1-203ENST00000425056 UBE2UQ5VVX9 321 aa13.47□□□□□ -0.25
GPC1-203ENST00000425056 OR2K2Q8NGT1 345 aa13.47□□□□□ -0.25
GPC1-203ENST00000425056 NUDCD2Q8WVJ2 157 aa13.47□□□□□ -0.25
GPC1-203ENST00000425056 SPATA25Q9BR10 227 aa13.47□□□□□ -0.25
GPC1-203ENST00000425056 ST6GALNAC5Q9BVH7 336 aa13.47□□□□□ -0.25
GPC1-203ENST00000425056 PEMTQ9UBM1 199 aa13.47□□□□□ -0.25
GPC1-203ENST00000425056 MRPS7Q9Y2R9 242 aaKnown RBP13.47□□□□□ -0.25
GPC1-203ENST00000425056 RBMX2Q9Y388 322 aaKnown RBP13.47□□□□□ -0.25
GPC1-203ENST00000425056 PRELID3BQ9Y3B1 194 aa13.47□□□□□ -0.25
GPC1-203ENST00000425056 CSMD3Q7Z407 3707 aa13.47□□□□□ -0.25
GPC1-203ENST00000425056 IGKV1D-13A0A0B4J2D9 117 aa13.46□□□□□ -0.25
GPC1-203ENST00000425056 TMEM235A6NFC5 223 aa13.46□□□□□ -0.25
GPC1-203ENST00000425056 AIREO43918 545 aa13.46□□□□□ -0.25
GPC1-203ENST00000425056 SCGNO76038 276 aa13.46□□□□□ -0.25
GPC1-203ENST00000425056 PRH1P02810 166 aa13.46□□□□□ -0.25
GPC1-203ENST00000425056 IGKV1-13P0DP09 117 aa13.46□□□□□ -0.25
GPC1-203ENST00000425056 MECP2P51608 486 aaKnown RBP13.46□□□□□ -0.25
GPC1-203ENST00000425056 RPL30P62888 115 aaKnown RBP13.46□□□□□ -0.25
GPC1-203ENST00000425056 HAGHQ16775 308 aa13.46□□□□□ -0.25
GPC1-203ENST00000425056 CNIH2Q6PI25 160 aa13.46□□□□□ -0.25
GPC1-203ENST00000425056 TTC9CQ8N5M4 171 aa13.46□□□□□ -0.25
GPC1-203ENST00000425056 TXNL4BQ9NX01 149 aaKnown RBP13.46□□□□□ -0.25
GPC1-203ENST00000425056 STARD9Q9P2P6 4700 aa13.46□□□□□ -0.26
GPC1-203ENST00000425056 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP13.45□□□□□ -0.26
GPC1-203ENST00000425056 IZUMO1RA6ND01 250 aa13.45□□□□□ -0.26
GPC1-203ENST00000425056 J3QRK9 145 aa13.45□□□□□ -0.26
GPC1-203ENST00000425056 TUSC2O75896 110 aa13.45□□□□□ -0.26
GPC1-203ENST00000425056 ATP5G2Q06055 141 aa13.45□□□□□ -0.26
GPC1-203ENST00000425056 EIF4EBP1Q13541 118 aaPredicted RBP13.45□□□□□ -0.26
GPC1-203ENST00000425056 OR2B11Q5JQS5 317 aa13.45□□□□□ -0.26
GPC1-203ENST00000425056 FAM209BQ5JX69 171 aa13.45□□□□□ -0.26
GPC1-203ENST00000425056 TPRA1Q86W33 373 aa13.45□□□□□ -0.26
GPC1-203ENST00000425056 NECAP1Q8NC96 275 aa13.45□□□□□ -0.26
GPC1-203ENST00000425056 OR4S2Q8NH73 311 aa13.45□□□□□ -0.26
GPC1-203ENST00000425056 DCUN1D5Q9BTE7 237 aa13.45□□□□□ -0.26
GPC1-203ENST00000425056 TEX22C9J3V5 150 aa13.44□□□□□ -0.26
GPC1-203ENST00000425056 SSX5O60225 188 aa13.44□□□□□ -0.26
GPC1-203ENST00000425056 KBTBD11O94819 623 aa13.44□□□□□ -0.26
GPC1-203ENST00000425056 PSMB9P28065 219 aa13.44□□□□□ -0.26
GPC1-203ENST00000425056 GNG2P59768 71 aa13.44□□□□□ -0.26
GPC1-203ENST00000425056 ADAMTSL5Q6ZMM2 481 aa13.44□□□□□ -0.26
GPC1-203ENST00000425056 SLC25A42Q86VD7 318 aa13.44□□□□□ -0.26
GPC1-203ENST00000425056 VSTM2AQ8TAG5 236 aa13.44□□□□□ -0.26
GPC1-203ENST00000425056 LGALS14Q8TCE9 139 aa13.44□□□□□ -0.26
GPC1-203ENST00000425056 FCGR1BQ92637 280 aa13.44□□□□□ -0.26
GPC1-203ENST00000425056 HSD17B10Q99714 261 aaKnown RBP13.44□□□□□ -0.26
GPC1-203ENST00000425056 OR51E2Q9H255 320 aa13.44□□□□□ -0.26
GPC1-203ENST00000425056 DAPK2Q9UIK4 370 aa13.44□□□□□ -0.26
GPC1-203ENST00000425056 ANXA10Q9UJ72 324 aa13.44□□□□□ -0.26
GPC1-203ENST00000425056 ZNF257Q9Y2Q1 563 aa13.44□□□□□ -0.26
GPC1-203ENST00000425056 LYSTQ99698 3801 aa13.43□□□□□ -0.26
GPC1-203ENST00000425056 LCE6AA0A183 80 aa13.43□□□□□ -0.26
GPC1-203ENST00000425056 C15orf32Q32M92 178 aa13.43□□□□□ -0.26
GPC1-203ENST00000425056 ZFAND6Q6FIF0 208 aa13.43□□□□□ -0.26
GPC1-203ENST00000425056 SFXN4Q6P4A7 337 aa13.43□□□□□ -0.26
GPC1-203ENST00000425056 ZNF773Q6PK81 442 aa13.43□□□□□ -0.26
GPC1-203ENST00000425056 LAX1Q8IWV1 398 aa13.43□□□□□ -0.26
GPC1-203ENST00000425056 VKORC1L1Q8N0U8 176 aa13.43□□□□□ -0.26
GPC1-203ENST00000425056 SPARTQ8N0X7 666 aa13.43□□□□□ -0.26
GPC1-203ENST00000425056 PUSL1Q8N0Z8 303 aaKnown RBP13.43□□□□□ -0.26
GPC1-203ENST00000425056 TMEM167AQ8TBQ9 72 aa13.43□□□□□ -0.26
GPC1-203ENST00000425056 TCTEX1D2Q8WW35 142 aa13.43□□□□□ -0.26
GPC1-203ENST00000425056 TUBA4BQ9H853 241 aa13.43□□□□□ -0.26
GPC1-203ENST00000425056 DMRT1Q9Y5R6 373 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 84.5 ms