RNA–Protein interactions for RNA: ENST00000416651.5

NIF3L1-206, Transcript of NGG1 interacting factor 3 like 1, human

TSL 2 BASIC

Gene NIF3L1, Length 967 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NIF3L1-206	ENST00000416651	IGKV3-7	A0A075B6H7	116 aa		6.16	□□□□□ -1.42
NIF3L1-206	ENST00000416651	EBAG9	O00559	213 aa		6.16	□□□□□ -1.42
NIF3L1-206	ENST00000416651	GNGT2	O14610	69 aa		6.16	□□□□□ -1.42
NIF3L1-206	ENST00000416651	SLC16A6	O15403	523 aa		6.16	□□□□□ -1.42
NIF3L1-206	ENST00000416651	MPPED1	O15442	326 aa		6.16	□□□□□ -1.42
NIF3L1-206	ENST00000416651	SCT	P09683	121 aa		6.16	□□□□□ -1.42
NIF3L1-206	ENST00000416651	ZNF93	P35789	620 aa	Predicted RBP	6.16	□□□□□ -1.42
NIF3L1-206	ENST00000416651	PRSS8	Q16651	343 aa		6.16	□□□□□ -1.42
NIF3L1-206	ENST00000416651	XAF1	Q6GPH4	301 aa		6.16	□□□□□ -1.42
NIF3L1-206	ENST00000416651	LHFPL3	Q86UP9	236 aa		6.16	□□□□□ -1.42
NIF3L1-206	ENST00000416651	DHFR2	Q86XF0	187 aa		6.16	□□□□□ -1.42
NIF3L1-206	ENST00000416651	GID4	Q8IVV7	300 aa		6.16	□□□□□ -1.42
NIF3L1-206	ENST00000416651	UBE2DNL	Q8IWF7	75 aa		6.16	□□□□□ -1.42
NIF3L1-206	ENST00000416651	NECAP1	Q8NC96	275 aa		6.16	□□□□□ -1.42
NIF3L1-206	ENST00000416651	SETD9	Q8NE22	299 aa		6.16	□□□□□ -1.42
NIF3L1-206	ENST00000416651	OR13C5	Q8NGS8	318 aa		6.16	□□□□□ -1.42
NIF3L1-206	ENST00000416651	MUL1	Q969V5	352 aa		6.16	□□□□□ -1.42
NIF3L1-206	ENST00000416651	GALM	Q96C23	342 aa		6.16	□□□□□ -1.42
NIF3L1-206	ENST00000416651	TMEM68	Q96MH6	324 aa		6.16	□□□□□ -1.42
NIF3L1-206	ENST00000416651	SPAG8	Q99932	426 aa	Predicted RBP	6.16	□□□□□ -1.42
NIF3L1-206	ENST00000416651	HDHD3	Q9BSH5	251 aa	Predicted RBP	6.16	□□□□□ -1.42
NIF3L1-206	ENST00000416651	HRH4	Q9H3N8	390 aa		6.16	□□□□□ -1.42
NIF3L1-206	ENST00000416651	C5orf66	Q9H5L9	145 aa		6.16	□□□□□ -1.42
NIF3L1-206	ENST00000416651	EXOSC1	Q9Y3B2	195 aa	Known RBP	6.16	□□□□□ -1.42
NIF3L1-206	ENST00000416651	TEX22	C9J3V5	150 aa		6.15	□□□□□ -1.42
NIF3L1-206	ENST00000416651		M0R1X1	148 aa		6.15	□□□□□ -1.42
NIF3L1-206	ENST00000416651	SMR3B	P02814	79 aa	Predicted RBP	6.15	□□□□□ -1.42
NIF3L1-206	ENST00000416651	RPSA	P08865	295 aa	Known RBP	6.15	□□□□□ -1.42
NIF3L1-206	ENST00000416651	GTF2F2	P13984	249 aa		6.15	□□□□□ -1.42
NIF3L1-206	ENST00000416651	PRDX6	P30041	224 aa		6.15	□□□□□ -1.42
NIF3L1-206	ENST00000416651	ATP6V1E1	P36543	226 aa		6.15	□□□□□ -1.42
NIF3L1-206	ENST00000416651	TMEM187	Q14656	261 aa		6.15	□□□□□ -1.42
NIF3L1-206	ENST00000416651	FAM106A	Q4KMX7	169 aa		6.15	□□□□□ -1.42
NIF3L1-206	ENST00000416651	TRAT1	Q6PIZ9	186 aa		6.15	□□□□□ -1.42
NIF3L1-206	ENST00000416651	GLIPR1L1	Q6UWM5	242 aa		6.15	□□□□□ -1.42
NIF3L1-206	ENST00000416651	NR2C2AP	Q86WQ0	139 aa		6.15	□□□□□ -1.42
NIF3L1-206	ENST00000416651	PDPN	Q86YL7	162 aa		6.15	□□□□□ -1.42
NIF3L1-206	ENST00000416651	TTC9C	Q8N5M4	171 aa		6.15	□□□□□ -1.42
NIF3L1-206	ENST00000416651	ACOT12	Q8WYK0	555 aa		6.15	□□□□□ -1.42
NIF3L1-206	ENST00000416651	HARBI1	Q96MB7	349 aa		6.15	□□□□□ -1.42
NIF3L1-206	ENST00000416651	FAAP24	Q9BTP7	215 aa		6.15	□□□□□ -1.42
NIF3L1-206	ENST00000416651	NDUFAF3	Q9BU61	184 aa		6.15	□□□□□ -1.42
NIF3L1-206	ENST00000416651	TEX12	Q9BXU0	123 aa		6.15	□□□□□ -1.42
NIF3L1-206	ENST00000416651	SELENOI	Q9C0D9	397 aa		6.15	□□□□□ -1.42
NIF3L1-206	ENST00000416651	ZNF430	Q9H8G1	570 aa	Predicted RBP	6.15	□□□□□ -1.42
NIF3L1-206	ENST00000416651	CLEC5A	Q9NY25	188 aa		6.15	□□□□□ -1.42
NIF3L1-206	ENST00000416651	MRPL27	Q9P0M9	148 aa	Known RBP	6.15	□□□□□ -1.42
NIF3L1-206	ENST00000416651	RPL36	Q9Y3U8	105 aa	Known RBP	6.15	□□□□□ -1.42
NIF3L1-206	ENST00000416651	TRAV8-7	A0A075B6U6	113 aa		6.14	□□□□□ -1.43
NIF3L1-206	ENST00000416651	IGHV3-49	A0A0A0MS15	119 aa		6.14	□□□□□ -1.43
NIF3L1-206	ENST00000416651	IGKV1-6	A0A0C4DH72	117 aa		6.14	□□□□□ -1.43
NIF3L1-206	ENST00000416651	DAPL1	A0PJW8	107 aa		6.14	□□□□□ -1.43
NIF3L1-206	ENST00000416651	GPX5	O75715	221 aa		6.14	□□□□□ -1.43
NIF3L1-206	ENST00000416651	REG1A	P05451	166 aa		6.14	□□□□□ -1.43
NIF3L1-206	ENST00000416651	CLEC3B	P05452	202 aa		6.14	□□□□□ -1.43
NIF3L1-206	ENST00000416651	IL6R	P08887	468 aa	Predicted RBP	6.14	□□□□□ -1.43
NIF3L1-206	ENST00000416651	CD3G	P09693	182 aa		6.14	□□□□□ -1.43
NIF3L1-206	ENST00000416651	AREG	P15514	252 aa		6.14	□□□□□ -1.43
NIF3L1-206	ENST00000416651	FUT3	P21217	361 aa		6.14	□□□□□ -1.43
NIF3L1-206	ENST00000416651	CEACAM6	P40199	344 aa		6.14	□□□□□ -1.43
NIF3L1-206	ENST00000416651	ELL	P55199	621 aa	Predicted RBP	6.14	□□□□□ -1.43
NIF3L1-206	ENST00000416651	RPS27A	P62979	156 aa	Known RBP	6.14	□□□□□ -1.43
NIF3L1-206	ENST00000416651	HAMP	P81172	84 aa		6.14	□□□□□ -1.43
NIF3L1-206	ENST00000416651	MED22	Q15528	200 aa		6.14	□□□□□ -1.43
NIF3L1-206	ENST00000416651	SOHLH1	Q5JUK2	328 aa		6.14	□□□□□ -1.43
NIF3L1-206	ENST00000416651	LEMD1	Q68G75	181 aa		6.14	□□□□□ -1.43
NIF3L1-206	ENST00000416651	OR10K2	Q6IF99	312 aa		6.14	□□□□□ -1.43
NIF3L1-206	ENST00000416651	C6orf201	Q7Z4U5	140 aa		6.14	□□□□□ -1.43
NIF3L1-206	ENST00000416651	LYPD1	Q8N2G4	141 aa		6.14	□□□□□ -1.43
NIF3L1-206	ENST00000416651	GBGT1	Q8N5D6	347 aa		6.14	□□□□□ -1.43
NIF3L1-206	ENST00000416651	FAM24B	Q8N5W8	94 aa		6.14	□□□□□ -1.43
NIF3L1-206	ENST00000416651	OR5AK2	Q8NH90	309 aa		6.14	□□□□□ -1.43
NIF3L1-206	ENST00000416651	SETD6	Q8TBK2	473 aa		6.14	□□□□□ -1.43
NIF3L1-206	ENST00000416651	ZNF184	Q99676	751 aa	Predicted RBP	6.14	□□□□□ -1.43
NIF3L1-206	ENST00000416651	ARPC5L	Q9BPX5	153 aa		6.14	□□□□□ -1.43
NIF3L1-206	ENST00000416651	KCNK15	Q9H427	330 aa		6.14	□□□□□ -1.43
NIF3L1-206	ENST00000416651	STEAP1	Q9UHE8	339 aa		6.14	□□□□□ -1.43
NIF3L1-206	ENST00000416651	APOA2	P02652	100 aa		6.13	□□□□□ -1.43
NIF3L1-206	ENST00000416651	MGMT	P16455	207 aa		6.13	□□□□□ -1.43
NIF3L1-206	ENST00000416651	C4BPB	P20851	252 aa		6.13	□□□□□ -1.43
NIF3L1-206	ENST00000416651	GPR183	P32249	361 aa		6.13	□□□□□ -1.43
NIF3L1-206	ENST00000416651	MNAT1	P51948	309 aa		6.13	□□□□□ -1.43
NIF3L1-206	ENST00000416651	FHL2	Q14192	279 aa		6.13	□□□□□ -1.43
NIF3L1-206	ENST00000416651	ZNF880	Q6PDB4	577 aa		6.13	□□□□□ -1.43
NIF3L1-206	ENST00000416651	SSX9	Q7RTT3	188 aa		6.13	□□□□□ -1.43
NIF3L1-206	ENST00000416651	SVIP	Q8NHG7	77 aa		6.13	□□□□□ -1.43
NIF3L1-206	ENST00000416651	CCDC124	Q96CT7	223 aa	Known RBP	6.13	□□□□□ -1.43
NIF3L1-206	ENST00000416651	RNF2	Q99496	336 aa		6.13	□□□□□ -1.43
NIF3L1-206	ENST00000416651	RIBC2	Q9H4K1	309 aa		6.13	□□□□□ -1.43
NIF3L1-206	ENST00000416651	RAB9B	Q9NP90	201 aa		6.13	□□□□□ -1.43
NIF3L1-206	ENST00000416651	IGHV3OR16-13	A0A075B7E8	117 aa		6.12	□□□□□ -1.43
NIF3L1-206	ENST00000416651	IGHV3-74	A0A0B4J1X5	117 aa		6.12	□□□□□ -1.43
NIF3L1-206	ENST00000416651		A0A1W2PPK0	400 aa		6.12	□□□□□ -1.43
NIF3L1-206	ENST00000416651	PDCD6	O75340	191 aa		6.12	□□□□□ -1.43
NIF3L1-206	ENST00000416651	IFNA21	P01568	189 aa		6.12	□□□□□ -1.43
NIF3L1-206	ENST00000416651	IFNA17	P01571	189 aa		6.12	□□□□□ -1.43
NIF3L1-206	ENST00000416651	IGFBP3	P17936	291 aa	Predicted RBP	6.12	□□□□□ -1.43
NIF3L1-206	ENST00000416651	BDKRB2	P30411	391 aa		6.12	□□□□□ -1.43
NIF3L1-206	ENST00000416651	SMN1	Q16637	294 aa	Known RBP	6.12	□□□□□ -1.43
NIF3L1-206	ENST00000416651	FAM209B	Q5JX69	171 aa		6.12	□□□□□ -1.43

Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms