RNA–Protein interactions for RNA: ENST00000396545.4

TNFSF13-205, Transcript of TNF superfamily member 13, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TNFSF13, Length 1,593 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF13-205ENST00000396545 DUX4L3P0CJ86 424 aa14.19□□□□□ -0.14
TNFSF13-205ENST00000396545 DUX4L4P0CJ87 422 aa14.19□□□□□ -0.14
TNFSF13-205ENST00000396545 DUX4L5P0CJ88 424 aa14.19□□□□□ -0.14
TNFSF13-205ENST00000396545 DUX4L6P0CJ89 424 aa14.19□□□□□ -0.14
TNFSF13-205ENST00000396545 DUX4L7P0CJ90 424 aa14.19□□□□□ -0.14
TNFSF13-205ENST00000396545 RPL31P62899 125 aaKnown RBP14.19□□□□□ -0.14
TNFSF13-205ENST00000396545 CXorf66Q5JRM2 361 aaPredicted RBP14.19□□□□□ -0.14
TNFSF13-205ENST00000396545 RPL7L1Q6DKI1 246 aaKnown RBP14.19□□□□□ -0.14
TNFSF13-205ENST00000396545 TCTEX1D1Q8N7M0 179 aa14.19□□□□□ -0.14
TNFSF13-205ENST00000396545 RFESDQ8TAC1 157 aa14.19□□□□□ -0.14
TNFSF13-205ENST00000396545 LRRC20Q8TCA0 184 aa14.19□□□□□ -0.14
TNFSF13-205ENST00000396545 AGMATQ9BSE5 352 aa14.19□□□□□ -0.14
TNFSF13-205ENST00000396545 MS4A7Q9GZW8 240 aaPredicted RBP14.19□□□□□ -0.14
TNFSF13-205ENST00000396545 GAL3ST2Q9H3Q3 398 aa14.19□□□□□ -0.14
TNFSF13-205ENST00000396545 DUX4Q9UBX2 424 aa14.19□□□□□ -0.14
TNFSF13-205ENST00000396545 PFDN2Q9UHV9 154 aa14.19□□□□□ -0.14
TNFSF13-205ENST00000396545 TGP01266 2768 aa14.19□□□□□ -0.14
TNFSF13-205ENST00000396545 DVL1O14640 695 aa14.18□□□□□ -0.14
TNFSF13-205ENST00000396545 IGKV1-5P01602 117 aa14.18□□□□□ -0.14
TNFSF13-205ENST00000396545 PVALBP20472 110 aaPredicted RBP14.18□□□□□ -0.14
TNFSF13-205ENST00000396545 POLR2GP62487 172 aaKnown RBP eCLIP14.18□□□□□ -0.14
TNFSF13-205ENST00000396545 CATR1Q13166 79 aa14.18□□□□□ -0.14
TNFSF13-205ENST00000396545 TOR2AQ5JU69 321 aa14.18□□□□□ -0.14
TNFSF13-205ENST00000396545 DUX4L9Q6RFH8 374 aaPredicted RBP14.18□□□□□ -0.14
TNFSF13-205ENST00000396545 BTNL3Q6UXE8 466 aa14.18□□□□□ -0.14
TNFSF13-205ENST00000396545 EIF4E3Q8N5X7 224 aaKnown RBP14.18□□□□□ -0.14
TNFSF13-205ENST00000396545 ARV1Q9H2C2 271 aa14.18□□□□□ -0.14
TNFSF13-205ENST00000396545 UNKLQ9H9P5 680 aaKnown RBP14.18□□□□□ -0.14
TNFSF13-205ENST00000396545 SDHAF2Q9NX18 166 aa14.18□□□□□ -0.14
TNFSF13-205ENST00000396545 RNF150Q9ULK6 438 aa14.18□□□□□ -0.14
TNFSF13-205ENST00000396545 DOCK11Q5JSL3 2073 aa14.18□□□□□ -0.14
TNFSF13-205ENST00000396545 IGHV3OR16-10A0A075B7F0 116 aa14.17□□□□□ -0.14
TNFSF13-205ENST00000396545 IGHV3-43A0A0B4J1X8 118 aa14.17□□□□□ -0.14
TNFSF13-205ENST00000396545 JTBO76095 146 aa14.17□□□□□ -0.14
TNFSF13-205ENST00000396545 IGHV3-43DP0DP04 118 aa14.17□□□□□ -0.14
TNFSF13-205ENST00000396545 LOXL3P58215 753 aa14.17□□□□□ -0.14
TNFSF13-205ENST00000396545 GNB2P62879 340 aa14.17□□□□□ -0.14
TNFSF13-205ENST00000396545 RPL30P62888 115 aaKnown RBP14.17□□□□□ -0.14
TNFSF13-205ENST00000396545 C17orf58Q2M2W7 97 aa14.17□□□□□ -0.14
TNFSF13-205ENST00000396545 MORN2Q502X0 79 aa14.17□□□□□ -0.14
TNFSF13-205ENST00000396545 LYPD2Q6UXB3 125 aa14.17□□□□□ -0.14
TNFSF13-205ENST00000396545 ZNF66Q6ZN08 573 aa14.17□□□□□ -0.14
TNFSF13-205ENST00000396545 HSD17B13Q7Z5P4 300 aaPredicted RBP14.17□□□□□ -0.14
TNFSF13-205ENST00000396545 OR2C3Q8N628 320 aa14.17□□□□□ -0.14
TNFSF13-205ENST00000396545 OR8B3Q8NGG8 313 aa14.17□□□□□ -0.14
TNFSF13-205ENST00000396545 NEIL1Q96FI4 390 aaPredicted RBP14.17□□□□□ -0.14
TNFSF13-205ENST00000396545 OR8B2Q96RD0 313 aa14.17□□□□□ -0.14
TNFSF13-205ENST00000396545 GNG12Q9UBI6 72 aa14.17□□□□□ -0.14
TNFSF13-205ENST00000396545 SOX21Q9Y651 276 aaPredicted RBP14.17□□□□□ -0.14
TNFSF13-205ENST00000396545 TRAV40A0A0B4J280 105 aa14.17□□□□□ -0.14
TNFSF13-205ENST00000396545 Q3ZCU0 254 aa14.17□□□□□ -0.14
TNFSF13-205ENST00000396545 Q6ZRM9 215 aa14.17□□□□□ -0.14
TNFSF13-205ENST00000396545 UBAC2Q8NBM4 344 aa14.17□□□□□ -0.14
TNFSF13-205ENST00000396545 TMED6Q8WW62 240 aa14.17□□□□□ -0.14
TNFSF13-205ENST00000396545 BSCL2Q96G97 398 aaPredicted RBP14.17□□□□□ -0.14
TNFSF13-205ENST00000396545 LYRM2Q9NU23 88 aaPredicted RBP14.17□□□□□ -0.14
TNFSF13-205ENST00000396545 IDI2-AS1Q9NZ38 188 aa14.17□□□□□ -0.14
TNFSF13-205ENST00000396545 CTSZQ9UBR2 303 aa14.17□□□□□ -0.14
TNFSF13-205ENST00000396545 VWFP04275 2813 aa14.17□□□□□ -0.14
TNFSF13-205ENST00000396545 A0A1W2PPH5 198 aa14.16□□□□□ -0.14
TNFSF13-205ENST00000396545 ST8SIA5O15466 376 aa14.16□□□□□ -0.14
TNFSF13-205ENST00000396545 P0C879 139 aa14.16□□□□□ -0.14
TNFSF13-205ENST00000396545 LPAR6P43657 344 aa14.16□□□□□ -0.14
TNFSF13-205ENST00000396545 RAB7AP51149 207 aa14.16□□□□□ -0.14
TNFSF13-205ENST00000396545 EWSR1Q01844 656 aaKnown RBP eCLIP14.16□□□□□ -0.14
TNFSF13-205ENST00000396545 EIF5AL1Q6IS14 154 aaKnown RBP14.16□□□□□ -0.14
TNFSF13-205ENST00000396545 TCF23Q7RTU1 214 aa14.16□□□□□ -0.14
TNFSF13-205ENST00000396545 RNF141Q8WVD5 230 aa14.16□□□□□ -0.14
TNFSF13-205ENST00000396545 ZNF714Q96N38 554 aa14.16□□□□□ -0.14
TNFSF13-205ENST00000396545 HSD17B10Q99714 261 aaKnown RBP14.16□□□□□ -0.14
TNFSF13-205ENST00000396545 GFOD1Q9NXC2 390 aa14.16□□□□□ -0.14
TNFSF13-205ENST00000396545 PSG11Q9UQ72 335 aa14.16□□□□□ -0.14
TNFSF13-205ENST00000396545 GAB2Q9UQC2 676 aa14.16□□□□□ -0.14
TNFSF13-205ENST00000396545 KIAA2026Q5HYC2 2103 aa14.15□□□□□ -0.14
TNFSF13-205ENST00000396545 MEX3AA1L020 520 aaKnown RBP14.15□□□□□ -0.14
TNFSF13-205ENST00000396545 IGSF23A1L1A6 192 aa14.15□□□□□ -0.14
TNFSF13-205ENST00000396545 SSSCA1O60232 199 aa14.15□□□□□ -0.14
TNFSF13-205ENST00000396545 FGF2P09038 288 aa14.15□□□□□ -0.14
TNFSF13-205ENST00000396545 BRWD1-AS2P59051 145 aa14.15□□□□□ -0.14
TNFSF13-205ENST00000396545 TAF15Q92804 592 aaKnown RBP eCLIP14.15□□□□□ -0.14
TNFSF13-205ENST00000396545 WFDC1Q9HC57 220 aa14.15□□□□□ -0.14
TNFSF13-205ENST00000396545 COA4Q9NYJ1 87 aa14.15□□□□□ -0.14
TNFSF13-205ENST00000396545 MMP24Q9Y5R2 645 aa14.15□□□□□ -0.14
TNFSF13-205ENST00000396545 I3L521 148 aa14.14□□□□□ -0.15
TNFSF13-205ENST00000396545 TMEM50AO95807 157 aa14.14□□□□□ -0.15
TNFSF13-205ENST00000396545 AKR1C2P52895 323 aa14.14□□□□□ -0.15
TNFSF13-205ENST00000396545 PAX9P55771 341 aa14.14□□□□□ -0.15
TNFSF13-205ENST00000396545 VAMP2P63027 116 aa14.14□□□□□ -0.15
TNFSF13-205ENST00000396545 LTC4SQ16873 150 aa14.14□□□□□ -0.15
TNFSF13-205ENST00000396545 TMEM200BQ69YZ2 307 aa14.14□□□□□ -0.15
TNFSF13-205ENST00000396545 HEPN1Q6WQI6 88 aa14.14□□□□□ -0.15
TNFSF13-205ENST00000396545 ZNF841Q6ZN19 808 aa14.14□□□□□ -0.15
TNFSF13-205ENST00000396545 FGFRL1Q8N441 504 aa14.14□□□□□ -0.15
TNFSF13-205ENST00000396545 TMEM252Q8N6L7 170 aa14.14□□□□□ -0.15
TNFSF13-205ENST00000396545 RNASE11Q8TAA1 199 aaKnown RBP14.14□□□□□ -0.15
TNFSF13-205ENST00000396545 H1FXQ92522 213 aaKnown RBP14.14□□□□□ -0.15
TNFSF13-205ENST00000396545 SMIM3Q9BZL3 60 aa14.14□□□□□ -0.15
TNFSF13-205ENST00000396545 SLC25A31Q9H0C2 315 aa14.14□□□□□ -0.15
TNFSF13-205ENST00000396545 MAGT1Q9H0U3 335 aa14.14□□□□□ -0.15
TNFSF13-205ENST00000396545 PRDM13Q9H4Q3 707 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms