RNA–Protein interactions for RNA: ENST00000379340.9

POLR2J3-201, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 1 (best)

Gene POLR2J3, Length 1,598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-201ENST00000379340 ARL16Q0P5N6 197 aa8.65□□□□□ -1.03
POLR2J3-201ENST00000379340 FBXL19-AS1Q494R0 122 aa8.65□□□□□ -1.03
POLR2J3-201ENST00000379340 FAM74A3Q4VXF1 159 aa8.65□□□□□ -1.03
POLR2J3-201ENST00000379340 SPSB3Q6PJ21 355 aa8.65□□□□□ -1.03
POLR2J3-201ENST00000379340 CENPVQ7Z7K6 275 aaPredicted RBP8.65□□□□□ -1.03
POLR2J3-201ENST00000379340 ZGRF1Q86YA3 2104 aa8.65□□□□□ -1.03
POLR2J3-201ENST00000379340 ZNF439Q8NDP4 499 aa8.65□□□□□ -1.03
POLR2J3-201ENST00000379340 DDB2Q92466 427 aa8.65□□□□□ -1.03
POLR2J3-201ENST00000379340 WFIKKN1Q96NZ8 548 aa8.65□□□□□ -1.03
POLR2J3-201ENST00000379340 GAL3ST2Q9H3Q3 398 aa8.65□□□□□ -1.03
POLR2J3-201ENST00000379340 MS4A5Q9H3V2 200 aa8.65□□□□□ -1.03
POLR2J3-201ENST00000379340 SAP30LQ9HAJ7 183 aa8.65□□□□□ -1.03
POLR2J3-201ENST00000379340 NDRG3Q9UGV2 375 aa8.65□□□□□ -1.03
POLR2J3-201ENST00000379340 DSCAMO60469 2012 aa8.64□□□□□ -1.03
POLR2J3-201ENST00000379340 PDZD2O15018 2839 aa8.64□□□□□ -1.03
POLR2J3-201ENST00000379340 PPIAL4EA0A075B759 164 aa8.64□□□□□ -1.03
POLR2J3-201ENST00000379340 TRGV8A0A0C4DH27 118 aa8.64□□□□□ -1.03
POLR2J3-201ENST00000379340 RBFOX3A6NFN3 312 aa8.64□□□□□ -1.03
POLR2J3-201ENST00000379340 C9JQL5 133 aa8.64□□□□□ -1.03
POLR2J3-201ENST00000379340 PPIAL4DF5H284 164 aa8.64□□□□□ -1.03
POLR2J3-201ENST00000379340 TMEM178BH3BS89 294 aa8.64□□□□□ -1.03
POLR2J3-201ENST00000379340 PROP1O75360 226 aa8.64□□□□□ -1.03
POLR2J3-201ENST00000379340 PPIAL4FP0DN26 164 aa8.64□□□□□ -1.03
POLR2J3-201ENST00000379340 SELLP14151 372 aa8.64□□□□□ -1.03
POLR2J3-201ENST00000379340 ATF4P18848 351 aaPredicted RBP8.64□□□□□ -1.03
POLR2J3-201ENST00000379340 CA7P43166 264 aa8.64□□□□□ -1.03
POLR2J3-201ENST00000379340 NPBWR1P48145 328 aa8.64□□□□□ -1.03
POLR2J3-201ENST00000379340 ZNF134P52741 427 aa8.64□□□□□ -1.03
POLR2J3-201ENST00000379340 GNB2P62879 340 aa8.64□□□□□ -1.03
POLR2J3-201ENST00000379340 CCL8P80075 99 aa8.64□□□□□ -1.03
POLR2J3-201ENST00000379340 EFNB3Q15768 340 aa8.64□□□□□ -1.03
POLR2J3-201ENST00000379340 TMEM41BQ5BJD5 291 aa8.64□□□□□ -1.03
POLR2J3-201ENST00000379340 PRAMEF5Q5TYX0 476 aa8.64□□□□□ -1.03
POLR2J3-201ENST00000379340 TCF23Q7RTU1 214 aa8.64□□□□□ -1.03
POLR2J3-201ENST00000379340 FAM216BQ8N7L0 139 aa8.64□□□□□ -1.03
POLR2J3-201ENST00000379340 ST6GALNAC3Q8NDV1 305 aa8.64□□□□□ -1.03
POLR2J3-201ENST00000379340 DEFB108BQ8NET1 73 aa8.64□□□□□ -1.03
POLR2J3-201ENST00000379340 OR10P1Q8NGE3 313 aa8.64□□□□□ -1.03
POLR2J3-201ENST00000379340 OR4A16Q8NH70 328 aa8.64□□□□□ -1.03
POLR2J3-201ENST00000379340 MBD3L1Q8WWY6 194 aa8.64□□□□□ -1.03
POLR2J3-201ENST00000379340 TAF15Q92804 592 aaKnown RBP eCLIP8.64□□□□□ -1.03
POLR2J3-201ENST00000379340 RAB39BQ96DA2 213 aa8.64□□□□□ -1.03
POLR2J3-201ENST00000379340 OR4C12Q96R67 309 aa8.64□□□□□ -1.03
POLR2J3-201ENST00000379340 RPUSD1Q9UJJ7 312 aaKnown RBP8.64□□□□□ -1.03
POLR2J3-201ENST00000379340 FBXO7Q9Y3I1 522 aa8.64□□□□□ -1.03
POLR2J3-201ENST00000379340 PPIAL4AQ9Y536 164 aa8.64□□□□□ -1.03
POLR2J3-201ENST00000379340 ZFHX3Q15911 3703 aa8.63□□□□□ -1.03
POLR2J3-201ENST00000379340 PMS2P5A8MQ11 134 aa8.63□□□□□ -1.03
POLR2J3-201ENST00000379340 SHISA9B4DS77 424 aa8.63□□□□□ -1.03
POLR2J3-201ENST00000379340 B9A039 149 aa8.63□□□□□ -1.03
POLR2J3-201ENST00000379340 MBP02144 154 aa8.63□□□□□ -1.03
POLR2J3-201ENST00000379340 HSPB1P04792 205 aaKnown RBP8.63□□□□□ -1.03
POLR2J3-201ENST00000379340 CD3EP07766 207 aa8.63□□□□□ -1.03
POLR2J3-201ENST00000379340 DAOP14920 347 aa8.63□□□□□ -1.03
POLR2J3-201ENST00000379340 APOBEC3AP31941 199 aaPredicted RBP8.63□□□□□ -1.03
POLR2J3-201ENST00000379340 MRPS11P82912 194 aaKnown RBP8.63□□□□□ -1.03
POLR2J3-201ENST00000379340 VWC2Q2TAL6 325 aa8.63□□□□□ -1.03
POLR2J3-201ENST00000379340 RPL39P5Q59GN2 51 aa8.63□□□□□ -1.03
POLR2J3-201ENST00000379340 CT45A1Q5HYN5 189 aa8.63□□□□□ -1.03
POLR2J3-201ENST00000379340 ZNF506Q5JVG8 444 aa8.63□□□□□ -1.03
POLR2J3-201ENST00000379340 ADAM5Q6NVV9 412 aa8.63□□□□□ -1.03
POLR2J3-201ENST00000379340 ZNF429Q86V71 674 aa8.63□□□□□ -1.03
POLR2J3-201ENST00000379340 CT45A3Q8NHU0 189 aa8.63□□□□□ -1.03
POLR2J3-201ENST00000379340 RNASE6Q93091 150 aaKnown RBP8.63□□□□□ -1.03
POLR2J3-201ENST00000379340 DYNLRB1Q9NP97 96 aa8.63□□□□□ -1.03
POLR2J3-201ENST00000379340 TMEM106BQ9NUM4 274 aa8.63□□□□□ -1.03
POLR2J3-201ENST00000379340 SLC25A10Q9UBX3 287 aaPredicted RBP8.63□□□□□ -1.03
POLR2J3-201ENST00000379340 CADP27708 2225 aa8.62□□□□□ -1.03
POLR2J3-201ENST00000379340 SAA2-SAA4A0A096LPE2 208 aa8.62□□□□□ -1.03
POLR2J3-201ENST00000379340 UBE2L5PA0A1B0GUS4 154 aa8.62□□□□□ -1.03
POLR2J3-201ENST00000379340 MEX3AA1L020 520 aaKnown RBP8.62□□□□□ -1.03
POLR2J3-201ENST00000379340 GPR37O15354 613 aa8.62□□□□□ -1.03
POLR2J3-201ENST00000379340 SLC31A2O15432 143 aa8.62□□□□□ -1.03
POLR2J3-201ENST00000379340 NUPL2O15504 423 aaKnown RBP8.62□□□□□ -1.03
POLR2J3-201ENST00000379340 NDUFA2O43678 99 aa8.62□□□□□ -1.03
POLR2J3-201ENST00000379340 HRASP01112 189 aa8.62□□□□□ -1.03
POLR2J3-201ENST00000379340 OR9G9P0C7N8 305 aa8.62□□□□□ -1.03
POLR2J3-201ENST00000379340 SAA2P0DJI9 122 aaPredicted RBP8.62□□□□□ -1.03
POLR2J3-201ENST00000379340 NDUFB7P17568 137 aa8.62□□□□□ -1.03
POLR2J3-201ENST00000379340 PAX6P26367 422 aa8.62□□□□□ -1.03
POLR2J3-201ENST00000379340 CHRNB4P30926 498 aa8.62□□□□□ -1.03
POLR2J3-201ENST00000379340 PMS2P11Q13670 270 aa8.62□□□□□ -1.03
POLR2J3-201ENST00000379340 POU2AF1Q16633 256 aa8.62□□□□□ -1.03
POLR2J3-201ENST00000379340 KHDC3LQ587J8 217 aa8.62□□□□□ -1.03
POLR2J3-201ENST00000379340 OR8G2PQ6IF36 304 aa8.62□□□□□ -1.03
POLR2J3-201ENST00000379340 SLC25A48Q6ZT89 311 aaKnown RBP8.62□□□□□ -1.03
POLR2J3-201ENST00000379340 DMRTC2Q8IXT2 367 aaPredicted RBP8.62□□□□□ -1.03
POLR2J3-201ENST00000379340 SFT2D1Q8WV19 159 aa8.62□□□□□ -1.03
POLR2J3-201ENST00000379340 AIFM2Q9BRQ8 373 aa8.62□□□□□ -1.03
POLR2J3-201ENST00000379340 RSG1Q9BU20 258 aa8.62□□□□□ -1.03
POLR2J3-201ENST00000379340 GGACTQ9BVM4 153 aa8.62□□□□□ -1.03
POLR2J3-201ENST00000379340 QTRT1Q9BXR0 403 aaKnown RBP8.62□□□□□ -1.03
POLR2J3-201ENST00000379340 RFNGQ9Y644 331 aa8.62□□□□□ -1.03
POLR2J3-201ENST00000379340 CCDC168Q8NDH2 2452 aa8.62□□□□□ -1.03
POLR2J3-201ENST00000379340 E7EQL1 145 aa8.61□□□□□ -1.03
POLR2J3-201ENST00000379340 C17orf112F2Z3M2 114 aa8.61□□□□□ -1.03
POLR2J3-201ENST00000379340 TMPRSS2O15393 492 aa8.61□□□□□ -1.03
POLR2J3-201ENST00000379340 IFNA1P01562 189 aa8.61□□□□□ -1.03
POLR2J3-201ENST00000379340 IFNA17P01571 189 aa8.61□□□□□ -1.03
POLR2J3-201ENST00000379340 ARG1P05089 322 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 94.3 ms