RNA–Protein interactions for RNA: ENST00000374426.6

CXCL12-202, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 1 (best) BASIC

Gene CXCL12, Length 470 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-202ENST00000374426 FOLR2P14207 255 aa10.37□□□□□ -0.75
CXCL12-202ENST00000374426 GNB3P16520 340 aa10.37□□□□□ -0.75
CXCL12-202ENST00000374426 CALRP27797 417 aaKnown RBP10.37□□□□□ -0.75
CXCL12-202ENST00000374426 KIR2DS2P43631 304 aa10.37□□□□□ -0.75
CXCL12-202ENST00000374426 GUCA2BQ16661 112 aa10.37□□□□□ -0.75
CXCL12-202ENST00000374426 C15orf32Q32M92 178 aa10.37□□□□□ -0.75
CXCL12-202ENST00000374426 H1FOOQ8IZA3 346 aaPredicted RBP10.37□□□□□ -0.75
CXCL12-202ENST00000374426 TTC9CQ8N5M4 171 aa10.37□□□□□ -0.75
CXCL12-202ENST00000374426 KCTD12Q96CX2 325 aaKnown RBP10.37□□□□□ -0.75
CXCL12-202ENST00000374426 WDR89Q96FK6 387 aaPredicted RBP10.37□□□□□ -0.75
CXCL12-202ENST00000374426 SPIN2AQ99865 258 aa10.37□□□□□ -0.75
CXCL12-202ENST00000374426 SPIN2BQ9BPZ2 258 aa10.37□□□□□ -0.75
CXCL12-202ENST00000374426 GINS4Q9BRT9 223 aa10.37□□□□□ -0.75
CXCL12-202ENST00000374426 RAB22AQ9UL26 194 aa10.37□□□□□ -0.75
CXCL12-202ENST00000374426 V9GY05 133 aa10.37□□□□□ -0.75
CXCL12-202ENST00000374426 KMT2AQ03164 3969 aa10.36□□□□□ -0.75
CXCL12-202ENST00000374426 IGKV1D-8A0A087WSZ0 117 aa10.36□□□□□ -0.75
CXCL12-202ENST00000374426 RAB27BO00194 218 aa10.36□□□□□ -0.75
CXCL12-202ENST00000374426 OR2J3O76001 311 aa10.36□□□□□ -0.75
CXCL12-202ENST00000374426 PSMA1P25786 263 aaKnown RBP10.36□□□□□ -0.75
CXCL12-202ENST00000374426 FABP5Q01469 135 aa10.36□□□□□ -0.75
CXCL12-202ENST00000374426 CDK10Q15131 360 aa10.36□□□□□ -0.75
CXCL12-202ENST00000374426 TRAM1Q15629 374 aa10.36□□□□□ -0.75
CXCL12-202ENST00000374426 HES5Q5TA89 166 aa10.36□□□□□ -0.75
CXCL12-202ENST00000374426 OR10R2Q8NGX6 335 aa10.36□□□□□ -0.75
CXCL12-202ENST00000374426 SCN3BQ9NY72 215 aa10.36□□□□□ -0.75
CXCL12-202ENST00000374426 A0A075B6Q4 140 aa10.35□□□□□ -0.75
CXCL12-202ENST00000374426 LGALS9O00182 355 aa10.35□□□□□ -0.75
CXCL12-202ENST00000374426 CREBL2O60519 120 aaPredicted RBP10.35□□□□□ -0.75
CXCL12-202ENST00000374426 ACTL6BO94805 426 aa10.35□□□□□ -0.75
CXCL12-202ENST00000374426 OR2C1O95371 312 aa10.35□□□□□ -0.75
CXCL12-202ENST00000374426 HIST1H1DP16402 221 aaKnown RBP10.35□□□□□ -0.75
CXCL12-202ENST00000374426 Q6ZS49 121 aa10.35□□□□□ -0.75
CXCL12-202ENST00000374426 C19orf35Q6ZS72 473 aa10.35□□□□□ -0.75
CXCL12-202ENST00000374426 MMD2Q8IY49 270 aa10.35□□□□□ -0.75
CXCL12-202ENST00000374426 CACNG8Q8WXS5 425 aa10.35□□□□□ -0.75
CXCL12-202ENST00000374426 TECRQ9NZ01 308 aaKnown RBP10.35□□□□□ -0.75
CXCL12-202ENST00000374426 SELENOKQ9Y6D0 94 aa10.35□□□□□ -0.75
CXCL12-202ENST00000374426 HMX3A6NHT5 357 aa10.34□□□□□ -0.75
CXCL12-202ENST00000374426 TEX22C9J3V5 150 aa10.34□□□□□ -0.75
CXCL12-202ENST00000374426 FCGR3BO75015 233 aa10.34□□□□□ -0.75
CXCL12-202ENST00000374426 GGCTO75223 188 aaKnown RBP10.34□□□□□ -0.75
CXCL12-202ENST00000374426 CBLN1P23435 193 aa10.34□□□□□ -0.75
CXCL12-202ENST00000374426 GADD45AP24522 165 aa10.34□□□□□ -0.75
CXCL12-202ENST00000374426 RANBP1P43487 201 aa10.34□□□□□ -0.75
CXCL12-202ENST00000374426 PSMD7P51665 324 aa10.34□□□□□ -0.75
CXCL12-202ENST00000374426 MLLT11Q13015 90 aaPredicted RBP10.34□□□□□ -0.75
CXCL12-202ENST00000374426 FAM209BQ5JX69 171 aa10.34□□□□□ -0.75
CXCL12-202ENST00000374426 SLC25A42Q86VD7 318 aa10.34□□□□□ -0.75
CXCL12-202ENST00000374426 TMEM61Q8N0U2 210 aa10.34□□□□□ -0.75
CXCL12-202ENST00000374426 VKORC1L1Q8N0U8 176 aa10.34□□□□□ -0.75
CXCL12-202ENST00000374426 LINC00476Q8WZB0 136 aa10.34□□□□□ -0.75
CXCL12-202ENST00000374426 CCDC140Q96MF4 163 aa10.34□□□□□ -0.75
CXCL12-202ENST00000374426 DCUN1D5Q9BTE7 237 aa10.34□□□□□ -0.75
CXCL12-202ENST00000374426 DUSP21Q9H596 190 aa10.34□□□□□ -0.75
CXCL12-202ENST00000374426 ELF5Q9UKW6 265 aaPredicted RBP10.34□□□□□ -0.75
CXCL12-202ENST00000374426 ZNF257Q9Y2Q1 563 aa10.34□□□□□ -0.75
CXCL12-202ENST00000374426 A0A1B0GW64 132 aa10.33□□□□□ -0.76
CXCL12-202ENST00000374426 TMEM213A2RRL7 107 aa10.33□□□□□ -0.76
CXCL12-202ENST00000374426 E7EUB6 86 aa10.33□□□□□ -0.76
CXCL12-202ENST00000374426 J3QRK9 145 aa10.33□□□□□ -0.76
CXCL12-202ENST00000374426 IGHV3-23P01764 117 aa10.33□□□□□ -0.76
CXCL12-202ENST00000374426 IL6RP08887 468 aaPredicted RBP10.33□□□□□ -0.76
CXCL12-202ENST00000374426 OR10A3P58181 314 aa10.33□□□□□ -0.76
CXCL12-202ENST00000374426 RPL30P62888 115 aaKnown RBP10.33□□□□□ -0.76
CXCL12-202ENST00000374426 OR2B11Q5JQS5 317 aa10.33□□□□□ -0.76
CXCL12-202ENST00000374426 KCTD9Q7L273 389 aa10.33□□□□□ -0.76
CXCL12-202ENST00000374426 SLC16A13Q7RTY0 426 aa10.33□□□□□ -0.76
CXCL12-202ENST00000374426 GPHB5Q86YW7 130 aa10.33□□□□□ -0.76
CXCL12-202ENST00000374426 ZNF645Q8N7E2 425 aa10.33□□□□□ -0.76
CXCL12-202ENST00000374426 FANCD2OSQ96PS1 177 aa10.33□□□□□ -0.76
CXCL12-202ENST00000374426 OVOL2Q9BRP0 275 aa10.33□□□□□ -0.76
CXCL12-202ENST00000374426 ACOT13Q9NPJ3 140 aa10.33□□□□□ -0.76
CXCL12-202ENST00000374426 FBXL7Q9UJT9 491 aa10.33□□□□□ -0.76
CXCL12-202ENST00000374426 IFITM5A6NNB3 132 aa10.32□□□□□ -0.76
CXCL12-202ENST00000374426 NPIPB5A8MRT5 1133 aa10.32□□□□□ -0.76
CXCL12-202ENST00000374426 RGS10O43665 173 aa10.32□□□□□ -0.76
CXCL12-202ENST00000374426 NDUFB8O95169 186 aa10.32□□□□□ -0.76
CXCL12-202ENST00000374426 IGLV2-14P01704 120 aa10.32□□□□□ -0.76
CXCL12-202ENST00000374426 RAB6AP20340 208 aa10.32□□□□□ -0.76
CXCL12-202ENST00000374426 TALDO1P37837 337 aa10.32□□□□□ -0.76
CXCL12-202ENST00000374426 ARFRP1Q13795 201 aa10.32□□□□□ -0.76
CXCL12-202ENST00000374426 CLEC19AQ6UXS0 136 aa10.32□□□□□ -0.76
CXCL12-202ENST00000374426 MGLLQ99685 303 aa10.32□□□□□ -0.76
CXCL12-202ENST00000374426 CENPOQ9BU64 300 aa10.32□□□□□ -0.76
CXCL12-202ENST00000374426 OR51E2Q9H255 320 aa10.32□□□□□ -0.76
CXCL12-202ENST00000374426 VCXQ9H320 206 aa10.32□□□□□ -0.76
CXCL12-202ENST00000374426 MLXQ9UH92 298 aa10.32□□□□□ -0.76
CXCL12-202ENST00000374426 RBMX2Q9Y388 322 aaKnown RBP10.32□□□□□ -0.76
CXCL12-202ENST00000374426 PRELID3BQ9Y3B1 194 aa10.32□□□□□ -0.76
CXCL12-202ENST00000374426 TPRKBQ9Y3C4 175 aa10.32□□□□□ -0.76
CXCL12-202ENST00000374426 S4R3C0 116 aa10.32□□□□□ -0.76
CXCL12-202ENST00000374426 A8MWP6 167 aa10.31□□□□□ -0.76
CXCL12-202ENST00000374426 KBTBD11O94819 623 aa10.31□□□□□ -0.76
CXCL12-202ENST00000374426 HLA-DQB1P01920 261 aa10.31□□□□□ -0.76
CXCL12-202ENST00000374426 AREGP15514 252 aa10.31□□□□□ -0.76
CXCL12-202ENST00000374426 NFYAP23511 347 aaPredicted RBP10.31□□□□□ -0.76
CXCL12-202ENST00000374426 DTYMKP23919 212 aa10.31□□□□□ -0.76
CXCL12-202ENST00000374426 ARL3P36405 182 aa10.31□□□□□ -0.76
CXCL12-202ENST00000374426 MAP2K4P45985 399 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms