RNA–Protein interactions for RNA: ENST00000371320.7

SSBP3-204, Transcript of single stranded DNA binding protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SSBP3, Length 2,077 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-204ENST00000371320 PRRG2O14669 202 aa23.89■■□□□ 1.41
SSBP3-204ENST00000371320 C1orf229Q6ZS94 237 aaPredicted RBP23.89■■□□□ 1.41
SSBP3-204ENST00000371320 NUP37Q8NFH4 326 aa23.89■■□□□ 1.41
SSBP3-204ENST00000371320 DDB2Q92466 427 aa23.89■■□□□ 1.41
SSBP3-204ENST00000371320 ABHD17AQ96GS6 310 aa23.89■■□□□ 1.41
SSBP3-204ENST00000371320 GAFA1Q96PS6 74 aa23.89■■□□□ 1.41
SSBP3-204ENST00000371320 C12orf57Q99622 126 aa23.89■■□□□ 1.41
SSBP3-204ENST00000371320 IFNA10P01566 189 aa23.88■■□□□ 1.41
SSBP3-204ENST00000371320 ELOBQ15370 118 aa23.88■■□□□ 1.41
SSBP3-204ENST00000371320 ZNF343Q6P1L6 599 aa23.88■■□□□ 1.41
SSBP3-204ENST00000371320 TMEM108Q6UXF1 575 aa23.88■■□□□ 1.41
SSBP3-204ENST00000371320 C1QL4Q86Z23 238 aa23.88■■□□□ 1.41
SSBP3-204ENST00000371320 OR4S2Q8NH73 311 aa23.88■■□□□ 1.41
SSBP3-204ENST00000371320 CCL13Q99616 98 aa23.88■■□□□ 1.41
SSBP3-204ENST00000371320 HEYLQ9NQ87 328 aaPredicted RBP23.88■■□□□ 1.41
SSBP3-204ENST00000371320 TMEM140Q9NV12 185 aa23.88■■□□□ 1.41
SSBP3-204ENST00000371320 A0A0G2JNJ9 132 aa23.88■■□□□ 1.41
SSBP3-204ENST00000371320 RPS10P46783 165 aaKnown RBP23.88■■□□□ 1.41
SSBP3-204ENST00000371320 RELBQ01201 579 aa23.88■■□□□ 1.41
SSBP3-204ENST00000371320 Q8WTZ3 238 aa23.88■■□□□ 1.41
SSBP3-204ENST00000371320 TMPRSS5Q9H3S3 457 aa23.88■■□□□ 1.41
SSBP3-204ENST00000371320 Q9UFV3 132 aa23.88■■□□□ 1.41
SSBP3-204ENST00000371320 URGCP-MRPS24S4R325 110 aa23.88■■□□□ 1.41
SSBP3-204ENST00000371320 UBE2CO00762 179 aa23.87■■□□□ 1.41
SSBP3-204ENST00000371320 GYPAP02724 150 aa23.87■■□□□ 1.41
SSBP3-204ENST00000371320 IRF2P14316 349 aa23.87■■□□□ 1.41
SSBP3-204ENST00000371320 CD1BP29016 333 aa23.87■■□□□ 1.41
SSBP3-204ENST00000371320 MEF2BQ02080 365 aaPredicted RBP23.87■■□□□ 1.41
SSBP3-204ENST00000371320 ZNF436-AS1Q8NC38 126 aaPredicted RBP23.87■■□□□ 1.41
SSBP3-204ENST00000371320 TRAV3A0A0B4J244 114 aa23.87■■□□□ 1.41
SSBP3-204ENST00000371320 C16orf97H3BN30 126 aa23.87■■□□□ 1.41
SSBP3-204ENST00000371320 PSMB3P49720 205 aa23.87■■□□□ 1.41
SSBP3-204ENST00000371320 TLE1Q04724 770 aa23.87■■□□□ 1.41
SSBP3-204ENST00000371320 SDF2L1Q9HCN8 221 aa23.87■■□□□ 1.41
SSBP3-204ENST00000371320 SAA2-SAA4A0A096LPE2 208 aa23.86■■□□□ 1.41
SSBP3-204ENST00000371320 SAA2P0DJI9 122 aaPredicted RBP23.86■■□□□ 1.41
SSBP3-204ENST00000371320 CD81P60033 236 aa23.86■■□□□ 1.41
SSBP3-204ENST00000371320 RAB24Q969Q5 203 aa23.86■■□□□ 1.41
SSBP3-204ENST00000371320 WDR83OSQ9Y284 106 aa23.86■■□□□ 1.41
SSBP3-204ENST00000371320 DSCAMO60469 2012 aa23.86■■□□□ 1.41
SSBP3-204ENST00000371320 PCP4L1A6NKN8 68 aa23.85■■□□□ 1.41
SSBP3-204ENST00000371320 VDAC2P45880 294 aaPredicted RBP23.85■■□□□ 1.41
SSBP3-204ENST00000371320 ERVFRD-1P60508 538 aa23.85■■□□□ 1.41
SSBP3-204ENST00000371320 PDLIM3Q53GG5 364 aaPredicted RBP23.85■■□□□ 1.41
SSBP3-204ENST00000371320 ZNF788Q6ZQV5 615 aa23.85■■□□□ 1.41
SSBP3-204ENST00000371320 WFDC8Q8IUA0 241 aa23.85■■□□□ 1.41
SSBP3-204ENST00000371320 FAM216BQ8N7L0 139 aa23.85■■□□□ 1.41
SSBP3-204ENST00000371320 TP53TG5Q9Y2B4 290 aa23.85■■□□□ 1.41
SSBP3-204ENST00000371320 CYB5BO43169 146 aa23.85■■□□□ 1.41
SSBP3-204ENST00000371320 CISD2Q8N5K1 135 aaKnown RBP23.85■■□□□ 1.41
SSBP3-204ENST00000371320 ELOVL5Q9NYP7 299 aa23.85■■□□□ 1.41
SSBP3-204ENST00000371320 CXCL1P09341 107 aa23.84■■□□□ 1.41
SSBP3-204ENST00000371320 TDGF1P3P51864 188 aa23.84■■□□□ 1.41
SSBP3-204ENST00000371320 FABP9Q0Z7S8 132 aa23.84■■□□□ 1.41
SSBP3-204ENST00000371320 ACOT6Q3I5F7 207 aaPredicted RBP23.84■■□□□ 1.41
SSBP3-204ENST00000371320 WDR25Q64LD2 544 aaPredicted RBP23.84■■□□□ 1.41
SSBP3-204ENST00000371320 TCF23Q7RTU1 214 aa23.84■■□□□ 1.41
SSBP3-204ENST00000371320 TGIF2LYQ8IUE0 185 aa23.84■■□□□ 1.41
SSBP3-204ENST00000371320 ZNF251Q9BRH9 671 aa23.84■■□□□ 1.41
SSBP3-204ENST00000371320 IDI2-AS1Q9NZ38 188 aa23.84■■□□□ 1.41
SSBP3-204ENST00000371320 METTL1Q9UBP6 276 aaKnown RBP23.84■■□□□ 1.41
SSBP3-204ENST00000371320 ICE1Q9Y2F5 2266 aa23.84■■□□□ 1.41
SSBP3-204ENST00000371320 THBS3P49746 956 aa23.83■■□□□ 1.41
SSBP3-204ENST00000371320 MEOX2P50222 304 aa23.83■■□□□ 1.41
SSBP3-204ENST00000371320 MRPS11P82912 194 aaKnown RBP23.83■■□□□ 1.41
SSBP3-204ENST00000371320 LYG1Q8N1E2 194 aa23.83■■□□□ 1.41
SSBP3-204ENST00000371320 PLCE1Q9P212 2302 aa23.83■■□□□ 1.41
SSBP3-204ENST00000371320 SMCO3A2RU48 225 aa23.83■■□□□ 1.41
SSBP3-204ENST00000371320 IGHV2-5P01817 119 aa23.83■■□□□ 1.41
SSBP3-204ENST00000371320 MANBALQ9NQG1 85 aa23.83■■□□□ 1.41
SSBP3-204ENST00000371320 ZNF729A6NN14 1252 aaPredicted RBP23.82■■□□□ 1.4
SSBP3-204ENST00000371320 RRHO14718 337 aa23.82■■□□□ 1.4
SSBP3-204ENST00000371320 CCL8P80075 99 aa23.82■■□□□ 1.4
SSBP3-204ENST00000371320 ASCL5Q7RTU5 278 aa23.82■■□□□ 1.4
SSBP3-204ENST00000371320 IQCF2Q8IXL9 164 aa23.82■■□□□ 1.4
SSBP3-204ENST00000371320 DCAF16Q9NXF7 216 aa23.82■■□□□ 1.4
SSBP3-204ENST00000371320 TCF19Q9Y242 345 aa23.82■■□□□ 1.4
SSBP3-204ENST00000371320 HCFC1P51610 2035 aa23.82■■□□□ 1.4
SSBP3-204ENST00000371320 CEP250Q9BV73 2442 aa23.82■■□□□ 1.4
SSBP3-204ENST00000371320 TGIF2-C20orf24A0A0A6YYL0 155 aa23.82■■□□□ 1.4
SSBP3-204ENST00000371320 GFRA3O60609 400 aa23.82■■□□□ 1.4
SSBP3-204ENST00000371320 TEX36Q5VZQ5 186 aa23.82■■□□□ 1.4
SSBP3-204ENST00000371320 Q8N7P7 452 aa23.82■■□□□ 1.4
SSBP3-204ENST00000371320 ZNF439Q8NDP4 499 aa23.82■■□□□ 1.4
SSBP3-204ENST00000371320 RHOVQ96L33 236 aa23.82■■□□□ 1.4
SSBP3-204ENST00000371320 SMIM7Q9BQ49 75 aa23.82■■□□□ 1.4
SSBP3-204ENST00000371320 TMEM242Q9NWH2 141 aa23.82■■□□□ 1.4
SSBP3-204ENST00000371320 GNG10P50151 68 aa23.81■■□□□ 1.4
SSBP3-204ENST00000371320 ADTRPQ96IZ2 230 aa23.81■■□□□ 1.4
SSBP3-204ENST00000371320 GGACTQ9BVM4 153 aa23.81■■□□□ 1.4
SSBP3-204ENST00000371320 SH3BGRL2Q9UJC5 107 aa23.81■■□□□ 1.4
SSBP3-204ENST00000371320 DPRXA6NFQ7 191 aa23.8■■□□□ 1.4
SSBP3-204ENST00000371320 CDC34P49427 236 aaPredicted RBP23.8■■□□□ 1.4
SSBP3-204ENST00000371320 ZNF674Q2M3X9 581 aa23.8■■□□□ 1.4
SSBP3-204ENST00000371320 ABHD12Q8N2K0 398 aa23.8■■□□□ 1.4
SSBP3-204ENST00000371320 ZNF383Q8NA42 475 aa23.8■■□□□ 1.4
SSBP3-204ENST00000371320 GATAD1Q8WUU5 269 aa23.8■■□□□ 1.4
SSBP3-204ENST00000371320 CORO2AQ92828 525 aa23.8■■□□□ 1.4
SSBP3-204ENST00000371320 DIRC2Q96SL1 478 aa23.8■■□□□ 1.4
SSBP3-204ENST00000371320 LINC00574Q9H8X3 128 aa23.8■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 102.9 ms