RNA–Protein interactions for RNA: ENST00000361311.4

CLSTN1-201, Transcript of calsyntenin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLSTN1, Length 4,647 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-201ENST00000361311 PGPEP1LA6NFU8 196 aa13.6□□□□□ -0.23
CLSTN1-201ENST00000361311 RIPPLY2Q5TAB7 128 aa13.6□□□□□ -0.23
CLSTN1-201ENST00000361311 CDCP2Q5VXM1 449 aa13.6□□□□□ -0.23
CLSTN1-201ENST00000361311 CDPF1Q6NVV7 123 aa13.6□□□□□ -0.23
CLSTN1-201ENST00000361311 ZDHHC16Q969W1 377 aa13.6□□□□□ -0.23
CLSTN1-201ENST00000361311 SNHG12Q9BXW3 62 aa13.6□□□□□ -0.23
CLSTN1-201ENST00000361311 PRDM14Q9GZV8 571 aa13.6□□□□□ -0.23
CLSTN1-201ENST00000361311 PRDM13Q9H4Q3 707 aa13.6□□□□□ -0.23
CLSTN1-201ENST00000361311 CORTO00230 105 aa13.6□□□□□ -0.23
CLSTN1-201ENST00000361311 S100A7P31151 101 aa13.6□□□□□ -0.23
CLSTN1-201ENST00000361311 TDGF1P3P51864 188 aa13.6□□□□□ -0.23
CLSTN1-201ENST00000361311 KLF3P57682 345 aaPredicted RBP13.6□□□□□ -0.23
CLSTN1-201ENST00000361311 GATAD1Q8WUU5 269 aa13.6□□□□□ -0.23
CLSTN1-201ENST00000361311 OR8B2Q96RD0 313 aa13.6□□□□□ -0.23
CLSTN1-201ENST00000361311 CLDN16Q9Y5I7 305 aa13.6□□□□□ -0.23
CLSTN1-201ENST00000361311 J3QR06 171 aa13.59□□□□□ -0.23
CLSTN1-201ENST00000361311 PRNDQ9UKY0 176 aa13.59□□□□□ -0.23
CLSTN1-201ENST00000361311 A8MWL6 223 aa13.59□□□□□ -0.23
CLSTN1-201ENST00000361311 SPINK14Q6IE38 97 aa13.59□□□□□ -0.23
CLSTN1-201ENST00000361311 SEMA5BQ9P283 1151 aa13.59□□□□□ -0.23
CLSTN1-201ENST00000361311 SPRY3O43610 288 aa13.59□□□□□ -0.23
CLSTN1-201ENST00000361311 BTF3P20290 206 aaKnown RBP13.59□□□□□ -0.23
CLSTN1-201ENST00000361311 DHRS13Q6UX07 377 aa13.59□□□□□ -0.23
CLSTN1-201ENST00000361311 ZNF837Q96EG3 531 aaPredicted RBP13.59□□□□□ -0.23
CLSTN1-201ENST00000361311 SSBP3Q9BWW4 388 aaPredicted RBP13.59□□□□□ -0.23
CLSTN1-201ENST00000361311 C3orf80F5H4A9 247 aa13.59□□□□□ -0.23
CLSTN1-201ENST00000361311 SYNGR3O43761 229 aa13.59□□□□□ -0.23
CLSTN1-201ENST00000361311 CA2P00918 260 aa13.59□□□□□ -0.23
CLSTN1-201ENST00000361311 CD33P20138 364 aa13.59□□□□□ -0.23
CLSTN1-201ENST00000361311 MAS1LP35410 378 aa13.59□□□□□ -0.23
CLSTN1-201ENST00000361311 ABHD12Q8N2K0 398 aa13.59□□□□□ -0.23
CLSTN1-201ENST00000361311 NUDT3O95989 172 aa13.58□□□□□ -0.24
CLSTN1-201ENST00000361311 C10orf113Q5VZT2 155 aa13.58□□□□□ -0.24
CLSTN1-201ENST00000361311 OR1B1Q8NGR6 318 aa13.58□□□□□ -0.24
CLSTN1-201ENST00000361311 PLP1P60201 277 aa13.58□□□□□ -0.24
CLSTN1-201ENST00000361311 SLC25A40Q8TBP6 338 aa13.58□□□□□ -0.24
CLSTN1-201ENST00000361311 TWSG1Q9GZX9 223 aa13.58□□□□□ -0.24
CLSTN1-201ENST00000361311 CEP250Q9BV73 2442 aa13.58□□□□□ -0.24
CLSTN1-201ENST00000361311 ICE1Q9Y2F5 2266 aa13.58□□□□□ -0.24
CLSTN1-201ENST00000361311 ZIC3O60481 467 aa13.58□□□□□ -0.24
CLSTN1-201ENST00000361311 CD55P08174 381 aa13.58□□□□□ -0.24
CLSTN1-201ENST00000361311 CTSSP25774 331 aa13.58□□□□□ -0.24
CLSTN1-201ENST00000361311 TCTAP57738 103 aa13.58□□□□□ -0.24
CLSTN1-201ENST00000361311 VMA21Q3ZAQ7 101 aa13.58□□□□□ -0.24
CLSTN1-201ENST00000361311 PKIBQ9C010 78 aa13.58□□□□□ -0.24
CLSTN1-201ENST00000361311 TRAV9-1A0A075B6T8 112 aa13.57□□□□□ -0.24
CLSTN1-201ENST00000361311 TMEM97Q5BJF2 176 aa13.57□□□□□ -0.24
CLSTN1-201ENST00000361311 ERASQ7Z444 233 aa13.57□□□□□ -0.24
CLSTN1-201ENST00000361311 NIT1Q86X76 327 aa13.57□□□□□ -0.24
CLSTN1-201ENST00000361311 PAXXQ9BUH6 204 aa13.57□□□□□ -0.24
CLSTN1-201ENST00000361311 KIAA2026Q5HYC2 2103 aa13.57□□□□□ -0.24
CLSTN1-201ENST00000361311 TRGV5A0A0B4J1U4 118 aa13.57□□□□□ -0.24
CLSTN1-201ENST00000361311 LINC00869P0C866 280 aa13.57□□□□□ -0.24
CLSTN1-201ENST00000361311 HGFACQ04756 655 aa13.57□□□□□ -0.24
CLSTN1-201ENST00000361311 RIGQ13278 110 aa13.57□□□□□ -0.24
CLSTN1-201ENST00000361311 ZNF766Q5HY98 468 aa13.57□□□□□ -0.24
CLSTN1-201ENST00000361311 SRXN1Q9BYN0 137 aa13.57□□□□□ -0.24
CLSTN1-201ENST00000361311 DECR2Q9NUI1 292 aa13.57□□□□□ -0.24
CLSTN1-201ENST00000361311 LOXL2Q9Y4K0 774 aa13.57□□□□□ -0.24
CLSTN1-201ENST00000361311 DIDO1Q9BTC0 2240 aaKnown RBP13.57□□□□□ -0.24
CLSTN1-201ENST00000361311 ZNF324BQ6AW86 544 aaPredicted RBP13.57□□□□□ -0.24
CLSTN1-201ENST00000361311 RPP25LQ8N5L8 163 aaKnown RBP13.57□□□□□ -0.24
CLSTN1-201ENST00000361311 ST6GALNAC6Q969X2 333 aa13.57□□□□□ -0.24
CLSTN1-201ENST00000361311 ZFP30Q9Y2G7 519 aa13.57□□□□□ -0.24
CLSTN1-201ENST00000361311 C3AR1Q16581 482 aa13.57□□□□□ -0.24
CLSTN1-201ENST00000361311 TEX38Q6PEX7 206 aa13.57□□□□□ -0.24
CLSTN1-201ENST00000361311 NDFIP1Q9BT67 221 aa13.57□□□□□ -0.24
CLSTN1-201ENST00000361311 TMEM70Q9BUB7 260 aa13.57□□□□□ -0.24
CLSTN1-201ENST00000361311 PRSS1P07477 247 aa13.56□□□□□ -0.24
CLSTN1-201ENST00000361311 CEBPDP49716 269 aaPredicted RBP13.56□□□□□ -0.24
CLSTN1-201ENST00000361311 RELBQ01201 579 aa13.56□□□□□ -0.24
CLSTN1-201ENST00000361311 SPEM2Q0P670 501 aa13.56□□□□□ -0.24
CLSTN1-201ENST00000361311 FLYWCH2Q96CP2 140 aaKnown RBP13.56□□□□□ -0.24
CLSTN1-201ENST00000361311 SMIM12Q96EX1 92 aa13.56□□□□□ -0.24
CLSTN1-201ENST00000361311 KCNS1Q96KK3 526 aa13.56□□□□□ -0.24
CLSTN1-201ENST00000361311 IGKV1-12A0A0C4DH73 117 aa13.56□□□□□ -0.24
CLSTN1-201ENST00000361311 GDF9O60383 454 aa13.56□□□□□ -0.24
CLSTN1-201ENST00000361311 IGKV1D-12P01611 117 aa13.56□□□□□ -0.24
CLSTN1-201ENST00000361311 NMSQ5H8A3 153 aa13.56□□□□□ -0.24
CLSTN1-201ENST00000361311 RNASEH2CQ8TDP1 164 aaKnown RBP13.56□□□□□ -0.24
CLSTN1-201ENST00000361311 ASCL3Q9NQ33 180 aa13.56□□□□□ -0.24
CLSTN1-201ENST00000361311 M0R1B8 84 aa13.56□□□□□ -0.24
CLSTN1-201ENST00000361311 MDP1Q86V88 176 aa13.56□□□□□ -0.24
CLSTN1-201ENST00000361311 COMPP49747 757 aaPredicted RBP13.56□□□□□ -0.24
CLSTN1-201ENST00000361311 ACTL10Q5JWF8 245 aa13.56□□□□□ -0.24
CLSTN1-201ENST00000361311 STPG3Q8N7X2 389 aa13.56□□□□□ -0.24
CLSTN1-201ENST00000361311 GAL3ST2Q9H3Q3 398 aa13.56□□□□□ -0.24
CLSTN1-201ENST00000361311 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP13.55□□□□□ -0.24
CLSTN1-201ENST00000361311 STXBP6Q8NFX7 210 aa13.55□□□□□ -0.24
CLSTN1-201ENST00000361311 LPAR2Q9HBW0 351 aa13.55□□□□□ -0.24
CLSTN1-201ENST00000361311 OR51B2Q9Y5P1 312 aa13.55□□□□□ -0.24
CLSTN1-201ENST00000361311 RRHO14718 337 aa13.55□□□□□ -0.24
CLSTN1-201ENST00000361311 HLA-DRB1P01911 266 aa13.55□□□□□ -0.24
CLSTN1-201ENST00000361311 RBP4P02753 201 aa13.55□□□□□ -0.24
CLSTN1-201ENST00000361311 EPHA8P29322 1005 aaPredicted RBP13.55□□□□□ -0.24
CLSTN1-201ENST00000361311 FBLN7Q53RD9 439 aa13.55□□□□□ -0.24
CLSTN1-201ENST00000361311 DCAF10Q5QP82 559 aa13.55□□□□□ -0.24
CLSTN1-201ENST00000361311 OR4F17Q8NGA8 305 aa13.55□□□□□ -0.24
CLSTN1-201ENST00000361311 RAB37Q96AX2 223 aa13.55□□□□□ -0.24
CLSTN1-201ENST00000361311 PROCRQ9UNN8 238 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 78.8 ms