RNA–Protein interactions for RNA: ENST00000343575.10

CXCL12-201, Transcript of C-X-C motif chemokine ligand 12, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CXCL12, Length 1,857 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-201ENST00000343575 CD300LFQ8TDQ1 290 aa12.06□□□□□ -0.48
CXCL12-201ENST00000343575 ISOC2Q96AB3 205 aa12.06□□□□□ -0.48
CXCL12-201ENST00000343575 GALNT14Q96FL9 552 aa12.06□□□□□ -0.48
CXCL12-201ENST00000343575 RSRP1Q9BUV0 290 aa12.06□□□□□ -0.48
CXCL12-201ENST00000343575 GAR1Q9NY12 217 aaKnown RBP12.06□□□□□ -0.48
CXCL12-201ENST00000343575 UBE2J1Q9Y385 318 aaPredicted RBP12.06□□□□□ -0.48
CXCL12-201ENST00000343575 C22orf46C9J442 243 aa12.06□□□□□ -0.48
CXCL12-201ENST00000343575 PHF1O43189 567 aaPredicted RBP12.06□□□□□ -0.48
CXCL12-201ENST00000343575 HSPA12AO43301 675 aa12.06□□□□□ -0.48
CXCL12-201ENST00000343575 IFNA10P01566 189 aa12.06□□□□□ -0.48
CXCL12-201ENST00000343575 PRH1P02810 166 aa12.06□□□□□ -0.48
CXCL12-201ENST00000343575 ZNF134P52741 427 aa12.06□□□□□ -0.48
CXCL12-201ENST00000343575 ZNF818PQ6ZRF7 136 aa12.06□□□□□ -0.48
CXCL12-201ENST00000343575 FOXRED2Q8IWF2 684 aa12.06□□□□□ -0.48
CXCL12-201ENST00000343575 OR8B3Q8NGG8 313 aa12.06□□□□□ -0.48
CXCL12-201ENST00000343575 OR10V1Q8NGI7 309 aa12.06□□□□□ -0.48
CXCL12-201ENST00000343575 PERPQ96FX8 193 aa12.06□□□□□ -0.48
CXCL12-201ENST00000343575 OR8B2Q96RD0 313 aa12.06□□□□□ -0.48
CXCL12-201ENST00000343575 AGMATQ9BSE5 352 aa12.06□□□□□ -0.48
CXCL12-201ENST00000343575 GFOD1Q9NXC2 390 aa12.06□□□□□ -0.48
CXCL12-201ENST00000343575 LSM5Q9Y4Y9 91 aaKnown RBP12.06□□□□□ -0.48
CXCL12-201ENST00000343575 APCP25054 2843 aa12.05□□□□□ -0.48
CXCL12-201ENST00000343575 VWC2LB2RUY7 222 aa12.05□□□□□ -0.48
CXCL12-201ENST00000343575 PDLIM4P50479 330 aa12.05□□□□□ -0.48
CXCL12-201ENST00000343575 OR2B8PP59922 312 aa12.05□□□□□ -0.48
CXCL12-201ENST00000343575 HERV-K104P61576 105 aa12.05□□□□□ -0.48
CXCL12-201ENST00000343575 LMO4P61968 165 aa12.05□□□□□ -0.48
CXCL12-201ENST00000343575 MORN2Q502X0 79 aa12.05□□□□□ -0.48
CXCL12-201ENST00000343575 C10orf105Q8TEF2 133 aa12.05□□□□□ -0.48
CXCL12-201ENST00000343575 CCL28Q9NRJ3 127 aa12.05□□□□□ -0.48
CXCL12-201ENST00000343575 PRR13Q9NZ81 148 aa12.05□□□□□ -0.48
CXCL12-201ENST00000343575 IGHV3-7P01780 117 aa12.04□□□□□ -0.48
CXCL12-201ENST00000343575 PRAMEF5Q5TYX0 476 aa12.04□□□□□ -0.48
CXCL12-201ENST00000343575 FAM185AQ8N0U4 392 aa12.04□□□□□ -0.48
CXCL12-201ENST00000343575 CLDND2Q8NHS1 167 aa12.04□□□□□ -0.48
CXCL12-201ENST00000343575 C8orf46Q8TAG6 207 aa12.04□□□□□ -0.48
CXCL12-201ENST00000343575 C5orf30Q96GV9 206 aa12.04□□□□□ -0.48
CXCL12-201ENST00000343575 GPHA2Q96T91 129 aa12.04□□□□□ -0.48
CXCL12-201ENST00000343575 SLC2A9Q9NRM0 540 aa12.04□□□□□ -0.48
CXCL12-201ENST00000343575 RPUSD1Q9UJJ7 312 aaKnown RBP12.04□□□□□ -0.48
CXCL12-201ENST00000343575 JPT1Q9UK76 154 aa12.04□□□□□ -0.48
CXCL12-201ENST00000343575 TRBV23-1A0A0A0MS06 115 aa12.04□□□□□ -0.48
CXCL12-201ENST00000343575 A0A1W2PPE2 198 aa12.04□□□□□ -0.48
CXCL12-201ENST00000343575 KIAA1324LA8MWY0 1029 aaPredicted RBP12.04□□□□□ -0.48
CXCL12-201ENST00000343575 GPR37O15354 613 aa12.04□□□□□ -0.48
CXCL12-201ENST00000343575 YPEL1O60688 119 aa12.04□□□□□ -0.48
CXCL12-201ENST00000343575 MBPP02686 304 aaPredicted RBP12.04□□□□□ -0.48
CXCL12-201ENST00000343575 ZFP36P26651 326 aaKnown RBP12.04□□□□□ -0.48
CXCL12-201ENST00000343575 PIGPP57054 158 aa12.04□□□□□ -0.48
CXCL12-201ENST00000343575 ZNF266Q14584 549 aa12.04□□□□□ -0.48
CXCL12-201ENST00000343575 PHLDA2Q53GA4 152 aa12.04□□□□□ -0.48
CXCL12-201ENST00000343575 LY6G5BQ8NDX9 201 aa12.04□□□□□ -0.48
CXCL12-201ENST00000343575 FAM168AQ92567 244 aa12.04□□□□□ -0.48
CXCL12-201ENST00000343575 LEAP2Q969E1 77 aa12.04□□□□□ -0.48
CXCL12-201ENST00000343575 ZNF714Q96N38 554 aa12.04□□□□□ -0.48
CXCL12-201ENST00000343575 YPEL2Q96QA6 119 aa12.04□□□□□ -0.48
CXCL12-201ENST00000343575 IDI2-AS1Q9NZ38 188 aa12.04□□□□□ -0.48
CXCL12-201ENST00000343575 IGHV4-30-2A0A087WSY4 118 aa12.03□□□□□ -0.48
CXCL12-201ENST00000343575 B4DEV8 164 aa12.03□□□□□ -0.48
CXCL12-201ENST00000343575 SLC31A2O15432 143 aa12.03□□□□□ -0.48
CXCL12-201ENST00000343575 ARG1P05089 322 aa12.03□□□□□ -0.48
CXCL12-201ENST00000343575 RPS10P46783 165 aaKnown RBP12.03□□□□□ -0.48
CXCL12-201ENST00000343575 LBHQ53QV2 105 aaPredicted RBP12.03□□□□□ -0.48
CXCL12-201ENST00000343575 ZNF439Q8NDP4 499 aa12.03□□□□□ -0.48
CXCL12-201ENST00000343575 ABHD14BQ96IU4 210 aa12.03□□□□□ -0.48
CXCL12-201ENST00000343575 SSBP3Q9BWW4 388 aaPredicted RBP12.03□□□□□ -0.48
CXCL12-201ENST00000343575 SMIM3Q9BZL3 60 aa12.03□□□□□ -0.48
CXCL12-201ENST00000343575 HIPK2Q9H2X6 1198 aa12.03□□□□□ -0.48
CXCL12-201ENST00000343575 NAA60Q9H7X0 242 aa12.03□□□□□ -0.48
CXCL12-201ENST00000343575 GNG12Q9UBI6 72 aa12.03□□□□□ -0.48
CXCL12-201ENST00000343575 RNF150Q9ULK6 438 aa12.03□□□□□ -0.48
CXCL12-201ENST00000343575 ANKRD17O75179 2603 aaKnown RBP12.03□□□□□ -0.48
CXCL12-201ENST00000343575 HSD17B6O14756 317 aa12.02□□□□□ -0.48
CXCL12-201ENST00000343575 ST8SIA3O43173 380 aa12.02□□□□□ -0.48
CXCL12-201ENST00000343575 PROP1O75360 226 aa12.02□□□□□ -0.48
CXCL12-201ENST00000343575 GNB2P62879 340 aa12.02□□□□□ -0.48
CXCL12-201ENST00000343575 SRPXP78539 464 aa12.02□□□□□ -0.48
CXCL12-201ENST00000343575 TMEM187Q14656 261 aa12.02□□□□□ -0.48
CXCL12-201ENST00000343575 OR52M1Q8NGK5 317 aa12.02□□□□□ -0.48
CXCL12-201ENST00000343575 KIAA1456Q9P272 454 aa12.02□□□□□ -0.48
CXCL12-201ENST00000343575 ABCA2Q9BZC7 2435 aa12.02□□□□□ -0.49
CXCL12-201ENST00000343575 IGHV4-61A0A0C4DH41 118 aa12.02□□□□□ -0.49
CXCL12-201ENST00000343575 RBFOX3A6NFN3 312 aa12.02□□□□□ -0.49
CXCL12-201ENST00000343575 C17orf98A8MV24 154 aa12.02□□□□□ -0.49
CXCL12-201ENST00000343575 ST8SIA5O15466 376 aa12.02□□□□□ -0.49
CXCL12-201ENST00000343575 HIST1H1BP16401 226 aaKnown RBP12.02□□□□□ -0.49
CXCL12-201ENST00000343575 PAX2Q02962 417 aa12.02□□□□□ -0.49
CXCL12-201ENST00000343575 ABCA11PQ4W5N1 156 aa12.02□□□□□ -0.49
CXCL12-201ENST00000343575 CT45A1Q5HYN5 189 aa12.02□□□□□ -0.49
CXCL12-201ENST00000343575 C1orf229Q6ZS94 237 aaPredicted RBP12.02□□□□□ -0.49
CXCL12-201ENST00000343575 LGI3Q8N145 548 aa12.02□□□□□ -0.49
CXCL12-201ENST00000343575 CT45A3Q8NHU0 189 aa12.02□□□□□ -0.49
CXCL12-201ENST00000343575 RTN4IP1Q8WWV3 396 aaPredicted RBP12.02□□□□□ -0.49
CXCL12-201ENST00000343575 NINJ1Q92982 152 aa12.02□□□□□ -0.49
CXCL12-201ENST00000343575 C20orf24Q9BUV8 137 aa12.02□□□□□ -0.49
CXCL12-201ENST00000343575 GAL3ST2Q9H3Q3 398 aa12.02□□□□□ -0.49
CXCL12-201ENST00000343575 FBXO7Q9Y3I1 522 aa12.02□□□□□ -0.49
CXCL12-201ENST00000343575 NAV2Q8IVL1 2488 aa12.01□□□□□ -0.49
CXCL12-201ENST00000343575 PPIAL4CA0A0B4J2A2 164 aa12.01□□□□□ -0.49
CXCL12-201ENST00000343575 NDUFS8O00217 210 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms