RNA–Protein interactions for RNA: ENST00000337659.10

PRPF4B-201, Transcript of pre-mRNA processing factor 4B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF4B, Length 4,415 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-201ENST00000337659 PRR20DP86480 221 aa4.34□□□□□ -1.71
PRPF4B-201ENST00000337659 PRR20BP86481 221 aa4.34□□□□□ -1.71
PRPF4B-201ENST00000337659 PRR20AP86496 221 aa4.34□□□□□ -1.71
PRPF4B-201ENST00000337659 ZNF506Q5JVG8 444 aa4.34□□□□□ -1.71
PRPF4B-201ENST00000337659 C5orf24Q7Z6I8 188 aa4.34□□□□□ -1.71
PRPF4B-201ENST00000337659 DCUN1D4Q92564 292 aa4.34□□□□□ -1.71
PRPF4B-201ENST00000337659 ZNF714Q96N38 554 aa4.34□□□□□ -1.71
PRPF4B-201ENST00000337659 TMEM133Q9H2Q1 129 aa4.34□□□□□ -1.71
PRPF4B-201ENST00000337659 RBKSQ9H477 322 aa4.34□□□□□ -1.71
PRPF4B-201ENST00000337659 SAP30LQ9HAJ7 183 aa4.34□□□□□ -1.71
PRPF4B-201ENST00000337659 ATMQ13315 3056 aa4.34□□□□□ -1.71
PRPF4B-201ENST00000337659 CEP295Q9C0D2 2601 aa4.34□□□□□ -1.71
PRPF4B-201ENST00000337659 A0A1B0GW55 424 aa4.34□□□□□ -1.71
PRPF4B-201ENST00000337659 DUX4L2P0CJ85 424 aa4.34□□□□□ -1.71
PRPF4B-201ENST00000337659 DUX4L3P0CJ86 424 aa4.34□□□□□ -1.71
PRPF4B-201ENST00000337659 DUX4L4P0CJ87 422 aa4.34□□□□□ -1.71
PRPF4B-201ENST00000337659 DUX4L5P0CJ88 424 aa4.34□□□□□ -1.71
PRPF4B-201ENST00000337659 DUX4L6P0CJ89 424 aa4.34□□□□□ -1.71
PRPF4B-201ENST00000337659 DUX4L7P0CJ90 424 aa4.34□□□□□ -1.71
PRPF4B-201ENST00000337659 AREGP15514 252 aa4.34□□□□□ -1.71
PRPF4B-201ENST00000337659 CTRB1P17538 263 aa4.34□□□□□ -1.71
PRPF4B-201ENST00000337659 ADCYAP1P18509 176 aa4.34□□□□□ -1.71
PRPF4B-201ENST00000337659 EPHA1P21709 976 aa4.34□□□□□ -1.71
PRPF4B-201ENST00000337659 BLOC1S1P78537 153 aa4.34□□□□□ -1.71
PRPF4B-201ENST00000337659 PJVKQ0ZLH3 352 aa4.34□□□□□ -1.71
PRPF4B-201ENST00000337659 UTF1Q5T230 341 aa4.34□□□□□ -1.71
PRPF4B-201ENST00000337659 CTRB2Q6GPI1 263 aa4.34□□□□□ -1.71
PRPF4B-201ENST00000337659 EIF5AL1Q6IS14 154 aaKnown RBP4.34□□□□□ -1.71
PRPF4B-201ENST00000337659 DUX4L9Q6RFH8 374 aaPredicted RBP4.34□□□□□ -1.71
PRPF4B-201ENST00000337659 PDZD9Q8IXQ8 264 aa4.34□□□□□ -1.71
PRPF4B-201ENST00000337659 OR4P4Q8NGL7 312 aa4.34□□□□□ -1.71
PRPF4B-201ENST00000337659 RAB39BQ96DA2 213 aa4.34□□□□□ -1.71
PRPF4B-201ENST00000337659 P2RX4Q99571 388 aa4.34□□□□□ -1.71
PRPF4B-201ENST00000337659 ARL6Q9H0F7 186 aa4.34□□□□□ -1.71
PRPF4B-201ENST00000337659 OR2D2Q9H210 308 aa4.34□□□□□ -1.71
PRPF4B-201ENST00000337659 DUX4Q9UBX2 424 aa4.34□□□□□ -1.71
PRPF4B-201ENST00000337659 SLC25A10Q9UBX3 287 aaPredicted RBP4.34□□□□□ -1.71
PRPF4B-201ENST00000337659 MARCH11A6NNE9 402 aa4.34□□□□□ -1.72
PRPF4B-201ENST00000337659 CCL21O00585 134 aa4.34□□□□□ -1.72
PRPF4B-201ENST00000337659 KBTBD11O94819 623 aa4.34□□□□□ -1.72
PRPF4B-201ENST00000337659 S1PR2O95136 353 aa4.34□□□□□ -1.72
PRPF4B-201ENST00000337659 CYB5R3P00387 301 aaPredicted RBP4.34□□□□□ -1.72
PRPF4B-201ENST00000337659 OR9G9P0C7N8 305 aa4.34□□□□□ -1.72
PRPF4B-201ENST00000337659 COMPP49747 757 aaPredicted RBP4.34□□□□□ -1.72
PRPF4B-201ENST00000337659 RAB2AP61019 212 aa4.34□□□□□ -1.72
PRPF4B-201ENST00000337659 ARL16Q0P5N6 197 aa4.34□□□□□ -1.72
PRPF4B-201ENST00000337659 GUCA2BQ16661 112 aa4.34□□□□□ -1.72
PRPF4B-201ENST00000337659 HLA-DRB5Q30154 266 aa4.34□□□□□ -1.72
PRPF4B-201ENST00000337659 TGIF2LYQ8IUE0 185 aa4.34□□□□□ -1.72
PRPF4B-201ENST00000337659 OR9G1Q8NH87 305 aa4.34□□□□□ -1.72
PRPF4B-201ENST00000337659 CXorf58Q96LI9 332 aa4.34□□□□□ -1.72
PRPF4B-201ENST00000337659 BEX1Q9HBH7 125 aa4.34□□□□□ -1.72
PRPF4B-201ENST00000337659 KCNJ16Q9NPI9 418 aa4.34□□□□□ -1.72
PRPF4B-201ENST00000337659 FKBP11Q9NYL4 201 aa4.34□□□□□ -1.72
PRPF4B-201ENST00000337659 RBM7Q9Y580 266 aaKnown RBP4.34□□□□□ -1.72
PRPF4B-201ENST00000337659 WNK2Q9Y3S1 2297 aa4.34□□□□□ -1.72
PRPF4B-201ENST00000337659 TRBV6-1A0A0K0K1D8 114 aa4.33□□□□□ -1.72
PRPF4B-201ENST00000337659 NQO2P16083 231 aa4.33□□□□□ -1.72
PRPF4B-201ENST00000337659 PI3P19957 117 aa4.33□□□□□ -1.72
PRPF4B-201ENST00000337659 MC5RP33032 325 aa4.33□□□□□ -1.72
PRPF4B-201ENST00000337659 F2RL1P55085 397 aa4.33□□□□□ -1.72
PRPF4B-201ENST00000337659 PAX8Q06710 450 aa4.33□□□□□ -1.72
PRPF4B-201ENST00000337659 CXorf66Q5JRM2 361 aaPredicted RBP4.33□□□□□ -1.72
PRPF4B-201ENST00000337659 PXDC1Q5TGL8 231 aa4.33□□□□□ -1.72
PRPF4B-201ENST00000337659 ZNF695Q8IW36 515 aa4.33□□□□□ -1.72
PRPF4B-201ENST00000337659 MUC15Q8N387 334 aa4.33□□□□□ -1.72
PRPF4B-201ENST00000337659 TCEAL7Q9BRU2 100 aa4.33□□□□□ -1.72
PRPF4B-201ENST00000337659 C19orf24Q9BVV8 132 aa4.33□□□□□ -1.72
PRPF4B-201ENST00000337659 PRNDQ9UKY0 176 aa4.33□□□□□ -1.72
PRPF4B-201ENST00000337659 IGF2RP11717 2491 aa4.33□□□□□ -1.72
PRPF4B-201ENST00000337659 MMP23AO75900 390 aa4.33□□□□□ -1.72
PRPF4B-201ENST00000337659 PRTN3P24158 256 aa4.33□□□□□ -1.72
PRPF4B-201ENST00000337659 GRNP28799 593 aaKnown RBP4.33□□□□□ -1.72
PRPF4B-201ENST00000337659 OPRK1P41145 380 aa4.33□□□□□ -1.72
PRPF4B-201ENST00000337659 LPAR6P43657 344 aa4.33□□□□□ -1.72
PRPF4B-201ENST00000337659 LGALS7P47929 136 aa4.33□□□□□ -1.72
PRPF4B-201ENST00000337659 FHITP49789 147 aa4.33□□□□□ -1.72
PRPF4B-201ENST00000337659 DSCR9P59020 149 aa4.33□□□□□ -1.72
PRPF4B-201ENST00000337659 LMO4P61968 165 aa4.33□□□□□ -1.72
PRPF4B-201ENST00000337659 BPIFCQ8NFQ6 507 aa4.33□□□□□ -1.72
PRPF4B-201ENST00000337659 NEIL1Q96FI4 390 aaPredicted RBP4.33□□□□□ -1.72
PRPF4B-201ENST00000337659 PDZD2O15018 2839 aa4.33□□□□□ -1.72
PRPF4B-201ENST00000337659 PTPN13Q12923 2485 aa4.33□□□□□ -1.72
PRPF4B-201ENST00000337659 DSPP15924 2871 aaKnown RBP4.33□□□□□ -1.72
PRPF4B-201ENST00000337659 A0A087WWC5 75 aa4.33□□□□□ -1.72
PRPF4B-201ENST00000337659 DVL1O14640 695 aa4.33□□□□□ -1.72
PRPF4B-201ENST00000337659 LIPFP07098 398 aa4.33□□□□□ -1.72
PRPF4B-201ENST00000337659 HOXB4P17483 251 aaPredicted RBP4.33□□□□□ -1.72
PRPF4B-201ENST00000337659 SSTR2P30874 369 aa4.33□□□□□ -1.72
PRPF4B-201ENST00000337659 PPP1CCP36873 323 aaKnown RBP4.33□□□□□ -1.72
PRPF4B-201ENST00000337659 EFNA4P52798 201 aa4.33□□□□□ -1.72
PRPF4B-201ENST00000337659 PHLDA2Q53GA4 152 aa4.33□□□□□ -1.72
PRPF4B-201ENST00000337659 WDR25Q64LD2 544 aaPredicted RBP4.33□□□□□ -1.72
PRPF4B-201ENST00000337659 RPL7L1Q6DKI1 246 aaKnown RBP4.33□□□□□ -1.72
PRPF4B-201ENST00000337659 LYPD2Q6UXB3 125 aa4.33□□□□□ -1.72
PRPF4B-201ENST00000337659 COMMD7Q86VX2 200 aa4.33□□□□□ -1.72
PRPF4B-201ENST00000337659 OR8H3Q8N146 312 aa4.33□□□□□ -1.72
PRPF4B-201ENST00000337659 RNASEH2CQ8TDP1 164 aaKnown RBP4.33□□□□□ -1.72
PRPF4B-201ENST00000337659 CACNG8Q8WXS5 425 aa4.33□□□□□ -1.72
PRPF4B-201ENST00000337659 ARL11Q969Q4 196 aa4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 75.4 ms