RNA–Protein interactions for RNA: ENST00000334504.11

COL4A6-201, Transcript of collagen type IV alpha 6 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL4A6, Length 6,700 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-201ENST00000334504 IGKV1D-16P01601 117 aa8.41□□□□□ -1.06
COL4A6-201ENST00000334504 SOX8P57073 446 aa8.41□□□□□ -1.06
COL4A6-201ENST00000334504 RPL31P62899 125 aaKnown RBP8.41□□□□□ -1.06
COL4A6-201ENST00000334504 ACSF3Q4G176 576 aaPredicted RBP8.41□□□□□ -1.06
COL4A6-201ENST00000334504 BHLHA9Q7RTU4 235 aa8.41□□□□□ -1.06
COL4A6-201ENST00000334504 TUBA4BQ9H853 241 aa8.41□□□□□ -1.06
COL4A6-201ENST00000334504 RPRMQ9NS64 109 aa8.41□□□□□ -1.06
COL4A6-201ENST00000334504 MARCH11A6NNE9 402 aa8.41□□□□□ -1.06
COL4A6-201ENST00000334504 TIMM23BQ5SRD1 257 aa8.41□□□□□ -1.06
COL4A6-201ENST00000334504 SLX4Q8IY92 1834 aa8.41□□□□□ -1.06
COL4A6-201ENST00000334504 COX14Q96I36 57 aa8.41□□□□□ -1.06
COL4A6-201ENST00000334504 PRDM14Q9GZV8 571 aa8.41□□□□□ -1.06
COL4A6-201ENST00000334504 WBP1LQ9NX94 342 aa8.41□□□□□ -1.06
COL4A6-201ENST00000334504 CLDND2Q8NHS1 167 aa8.41□□□□□ -1.06
COL4A6-201ENST00000334504 TMEM229AB2RXF0 380 aa8.41□□□□□ -1.06
COL4A6-201ENST00000334504 TNFSF14O43557 240 aa8.41□□□□□ -1.06
COL4A6-201ENST00000334504 SPRED2Q7Z698 418 aa8.41□□□□□ -1.06
COL4A6-201ENST00000334504 CCL13Q99616 98 aa8.41□□□□□ -1.06
COL4A6-201ENST00000334504 MUC21A0A0G2JKD1 596 aa8.41□□□□□ -1.06
COL4A6-201ENST00000334504 MUC21A0A140T8X8 626 aa8.41□□□□□ -1.06
COL4A6-201ENST00000334504 NPFFO15130 113 aa8.41□□□□□ -1.06
COL4A6-201ENST00000334504 ATP5LO75964 103 aa8.41□□□□□ -1.06
COL4A6-201ENST00000334504 GPX1P07203 203 aa8.41□□□□□ -1.06
COL4A6-201ENST00000334504 IL6RP08887 468 aaPredicted RBP8.41□□□□□ -1.06
COL4A6-201ENST00000334504 SLC25A53Q5H9E4 307 aa8.41□□□□□ -1.06
COL4A6-201ENST00000334504 MUC21Q5SSG8 566 aa8.41□□□□□ -1.06
COL4A6-201ENST00000334504 PSMB11A5LHX3 300 aa8.4□□□□□ -1.06
COL4A6-201ENST00000334504 CCL3P10147 92 aa8.4□□□□□ -1.06
COL4A6-201ENST00000334504 UCP3P55916 312 aa8.4□□□□□ -1.06
COL4A6-201ENST00000334504 PSG4Q00888 419 aa8.4□□□□□ -1.06
COL4A6-201ENST00000334504 CYP2G1PQ6ZSU1 146 aa8.4□□□□□ -1.06
COL4A6-201ENST00000334504 VKORC1L1Q8N0U8 176 aa8.4□□□□□ -1.06
COL4A6-201ENST00000334504 RNASEH2CQ8TDP1 164 aaKnown RBP8.4□□□□□ -1.06
COL4A6-201ENST00000334504 MARS2Q96GW9 593 aaKnown RBP8.4□□□□□ -1.06
COL4A6-201ENST00000334504 PRRC2BQ5JSZ5 2229 aaKnown RBP8.4□□□□□ -1.06
COL4A6-201ENST00000334504 TMEM262E9PQX1 116 aa8.4□□□□□ -1.06
COL4A6-201ENST00000334504 CGAP01215 116 aa8.4□□□□□ -1.06
COL4A6-201ENST00000334504 ATP5G3P48201 142 aa8.4□□□□□ -1.06
COL4A6-201ENST00000334504 HSPE1P61604 102 aaKnown RBP8.4□□□□□ -1.06
COL4A6-201ENST00000334504 ZP4Q12836 540 aa8.4□□□□□ -1.06
COL4A6-201ENST00000334504 ZFAND6Q6FIF0 208 aa8.4□□□□□ -1.06
COL4A6-201ENST00000334504 ORAOV1Q8WV07 137 aa8.4□□□□□ -1.06
COL4A6-201ENST00000334504 NPFFR1Q9GZQ6 430 aa8.4□□□□□ -1.06
COL4A6-201ENST00000334504 GFRA3O60609 400 aa8.4□□□□□ -1.06
COL4A6-201ENST00000334504 GCSAMQ8N6F7 178 aa8.4□□□□□ -1.06
COL4A6-201ENST00000334504 FADS6Q8N9I5 356 aa8.4□□□□□ -1.06
COL4A6-201ENST00000334504 OR4X2Q8NGF9 303 aa8.4□□□□□ -1.06
COL4A6-201ENST00000334504 YBX2Q9Y2T7 364 aaKnown RBP8.4□□□□□ -1.06
COL4A6-201ENST00000334504 LAMB1P07942 1786 aa8.4□□□□□ -1.06
COL4A6-201ENST00000334504 IZUMO1RA6ND01 250 aa8.4□□□□□ -1.06
COL4A6-201ENST00000334504 FOXI3A8MTJ6 420 aaPredicted RBP8.4□□□□□ -1.06
COL4A6-201ENST00000334504 TRA2AQ13595 282 aaKnown RBP eCLIP8.4□□□□□ -1.06
COL4A6-201ENST00000334504 CITED1Q99966 193 aa8.4□□□□□ -1.06
COL4A6-201ENST00000334504 C19orf24Q9BVV8 132 aa8.4□□□□□ -1.06
COL4A6-201ENST00000334504 NPCDR1Q9BY65 106 aa8.4□□□□□ -1.06
COL4A6-201ENST00000334504 TRAV9-2A0A087WT02 112 aa8.4□□□□□ -1.07
COL4A6-201ENST00000334504 SFTPCP11686 197 aa8.4□□□□□ -1.07
COL4A6-201ENST00000334504 CA7P43166 264 aa8.4□□□□□ -1.07
COL4A6-201ENST00000334504 TFF3Q07654 80 aa8.4□□□□□ -1.07
COL4A6-201ENST00000334504 UNQ9370/PRO34162Q6UXP9 181 aa8.4□□□□□ -1.07
COL4A6-201ENST00000334504 LINC00305Q7Z4B0 112 aa8.4□□□□□ -1.07
COL4A6-201ENST00000334504 HOXA3O43365 443 aaPredicted RBP8.4□□□□□ -1.07
COL4A6-201ENST00000334504 ZFP36L2P47974 494 aaKnown RBP8.4□□□□□ -1.07
COL4A6-201ENST00000334504 TMEM106BQ9NUM4 274 aa8.4□□□□□ -1.07
COL4A6-201ENST00000334504 MGST3O14880 152 aa8.39□□□□□ -1.07
COL4A6-201ENST00000334504 PAPPA-AS1Q5QFB9 102 aa8.39□□□□□ -1.07
COL4A6-201ENST00000334504 C9orf40Q8IXQ3 194 aa8.39□□□□□ -1.07
COL4A6-201ENST00000334504 A0A1W2PPV9 198 aa8.39□□□□□ -1.07
COL4A6-201ENST00000334504 HIST1H2BKO60814 126 aa8.39□□□□□ -1.07
COL4A6-201ENST00000334504 IGHV3-48P01763 117 aa8.39□□□□□ -1.07
COL4A6-201ENST00000334504 HIST1H2BJP06899 126 aa8.39□□□□□ -1.07
COL4A6-201ENST00000334504 FTH1P19P0C7X4 201 aa8.39□□□□□ -1.07
COL4A6-201ENST00000334504 HIST1H2BOP23527 126 aa8.39□□□□□ -1.07
COL4A6-201ENST00000334504 HIST1H2BBP33778 126 aa8.39□□□□□ -1.07
COL4A6-201ENST00000334504 HIST1H2BDP58876 126 aa8.39□□□□□ -1.07
COL4A6-201ENST00000334504 HIST1H2BCP62807 126 aa8.39□□□□□ -1.07
COL4A6-201ENST00000334504 PAX2Q02962 417 aa8.39□□□□□ -1.07
COL4A6-201ENST00000334504 HIST2H2BEQ16778 126 aa8.39□□□□□ -1.07
COL4A6-201ENST00000334504 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.39□□□□□ -1.07
COL4A6-201ENST00000334504 DNASE2BQ8WZ79 361 aa8.39□□□□□ -1.07
COL4A6-201ENST00000334504 HIST1H2BHQ93079 126 aa8.39□□□□□ -1.07
COL4A6-201ENST00000334504 HIST1H2BNQ99877 126 aa8.39□□□□□ -1.07
COL4A6-201ENST00000334504 HIST1H2BMQ99879 126 aa8.39□□□□□ -1.07
COL4A6-201ENST00000334504 TRAV21A0A0B4J279 112 aa8.39□□□□□ -1.07
COL4A6-201ENST00000334504 A0A1W2PS18 150 aa8.39□□□□□ -1.07
COL4A6-201ENST00000334504 CISD3P0C7P0 127 aa8.39□□□□□ -1.07
COL4A6-201ENST00000334504 LEPP41159 167 aa8.39□□□□□ -1.07
COL4A6-201ENST00000334504 TMEM52Q8NDY8 209 aa8.39□□□□□ -1.07
COL4A6-201ENST00000334504 DDB2Q92466 427 aa8.39□□□□□ -1.07
COL4A6-201ENST00000334504 CYSLTR1Q9Y271 337 aa8.39□□□□□ -1.07
COL4A6-201ENST00000334504 NINQ8N4C6 2090 aa8.39□□□□□ -1.07
COL4A6-201ENST00000334504 PPIAL4EA0A075B759 164 aa8.39□□□□□ -1.07
COL4A6-201ENST00000334504 TRAV14DV4A0A0A6YYC5 116 aa8.39□□□□□ -1.07
COL4A6-201ENST00000334504 WNT9BO14905 357 aa8.39□□□□□ -1.07
COL4A6-201ENST00000334504 PPIAL4FP0DN26 164 aa8.39□□□□□ -1.07
COL4A6-201ENST00000334504 MFAP4P55083 255 aa8.39□□□□□ -1.07
COL4A6-201ENST00000334504 INO80CQ6PI98 192 aaPredicted RBP8.39□□□□□ -1.07
COL4A6-201ENST00000334504 WFDC6Q9BQY6 131 aa8.39□□□□□ -1.07
COL4A6-201ENST00000334504 PPIAL4AQ9Y536 164 aa8.39□□□□□ -1.07
COL4A6-201ENST00000334504 TRAV9-1A0A075B6T8 112 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 97.6 ms