RNA–Protein interactions for RNA: ENST00000285199.11

USP43-201, Transcript of ubiquitin specific peptidase 43, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene USP43, Length 4,169 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP43-201ENST00000285199 A0A0G2JRQ6 117 aa13.34□□□□□ -0.27
USP43-201ENST00000285199 RPP25LQ8N5L8 163 aaKnown RBP13.34□□□□□ -0.27
USP43-201ENST00000285199 HS3ST6Q96QI5 342 aa13.34□□□□□ -0.27
USP43-201ENST00000285199 CA11O75493 328 aa13.34□□□□□ -0.27
USP43-201ENST00000285199 CLDN14O95500 239 aa13.34□□□□□ -0.27
USP43-201ENST00000285199 CT45A10P0DMU9 189 aa13.34□□□□□ -0.27
USP43-201ENST00000285199 WDR73Q6P4I2 378 aa13.34□□□□□ -0.27
USP43-201ENST00000285199 TMEM250H0YL14 139 aa13.33□□□□□ -0.27
USP43-201ENST00000285199 NEURL1O76050 574 aa13.33□□□□□ -0.27
USP43-201ENST00000285199 TMEM50AO95807 157 aa13.33□□□□□ -0.27
USP43-201ENST00000285199 SPSB3Q6PJ21 355 aa13.33□□□□□ -0.27
USP43-201ENST00000285199 MOGAT3Q86VF5 341 aa13.33□□□□□ -0.27
USP43-201ENST00000285199 NPIPB13A6NJU9 1138 aa13.33□□□□□ -0.28
USP43-201ENST00000285199 NPIPB4C9JG80 1138 aa13.33□□□□□ -0.28
USP43-201ENST00000285199 RBP4P02753 201 aa13.33□□□□□ -0.28
USP43-201ENST00000285199 GZMBP10144 247 aa13.33□□□□□ -0.28
USP43-201ENST00000285199 CD99P14209 185 aa13.33□□□□□ -0.28
USP43-201ENST00000285199 SUB1P53999 127 aaKnown RBP eCLIP13.33□□□□□ -0.28
USP43-201ENST00000285199 UNQ6494/PRO21346Q6UXR6 183 aa13.33□□□□□ -0.28
USP43-201ENST00000285199 CT55Q8WUE5 264 aa13.33□□□□□ -0.28
USP43-201ENST00000285199 NPCDR1Q9BY65 106 aa13.33□□□□□ -0.28
USP43-201ENST00000285199 OPN3Q9H1Y3 402 aaPredicted RBP13.33□□□□□ -0.28
USP43-201ENST00000285199 DECR2Q9NUI1 292 aa13.33□□□□□ -0.28
USP43-201ENST00000285199 TBL2Q9Y4P3 447 aaKnown RBP13.33□□□□□ -0.28
USP43-201ENST00000285199 PAFAH1B2P68402 229 aa13.33□□□□□ -0.28
USP43-201ENST00000285199 MMDQ15546 238 aa13.33□□□□□ -0.28
USP43-201ENST00000285199 IBA57Q5T440 356 aaKnown RBP13.33□□□□□ -0.28
USP43-201ENST00000285199 ZNF738Q8NE65 137 aa13.33□□□□□ -0.28
USP43-201ENST00000285199 GTF3AQ92664 365 aaKnown RBP13.33□□□□□ -0.28
USP43-201ENST00000285199 PPIAL4AQ9Y536 164 aa13.33□□□□□ -0.28
USP43-201ENST00000285199 J3QR06 171 aa13.32□□□□□ -0.28
USP43-201ENST00000285199 OR4A47Q6IF82 309 aa13.32□□□□□ -0.28
USP43-201ENST00000285199 WFDC8Q8IUA0 241 aa13.32□□□□□ -0.28
USP43-201ENST00000285199 NPVFQ9HCQ7 196 aa13.32□□□□□ -0.28
USP43-201ENST00000285199 IFNL4K9M1U5 179 aa13.32□□□□□ -0.28
USP43-201ENST00000285199 C10orf128Q5T292 105 aa13.32□□□□□ -0.28
USP43-201ENST00000285199 SMRP1Q8NCR6 262 aa13.32□□□□□ -0.28
USP43-201ENST00000285199 MAFAQ8NHW3 353 aaPredicted RBP13.32□□□□□ -0.28
USP43-201ENST00000285199 LRRC30A6NM36 301 aa13.32□□□□□ -0.28
USP43-201ENST00000285199 CGAP01215 116 aa13.32□□□□□ -0.28
USP43-201ENST00000285199 IGHV2-5P01817 119 aa13.32□□□□□ -0.28
USP43-201ENST00000285199 Q6ZRM9 215 aa13.32□□□□□ -0.28
USP43-201ENST00000285199 ZCCHC14Q8WYQ9 949 aaKnown RBP13.32□□□□□ -0.28
USP43-201ENST00000285199 C1orf147Q96MC9 270 aaPredicted RBP13.32□□□□□ -0.28
USP43-201ENST00000285199 PARD6GQ9BYG4 376 aaPredicted RBP13.32□□□□□ -0.28
USP43-201ENST00000285199 PLA2G2EQ9NZK7 142 aa13.32□□□□□ -0.28
USP43-201ENST00000285199 BPIFB3P59826 476 aa13.32□□□□□ -0.28
USP43-201ENST00000285199 OR8A1Q8NGG7 326 aa13.32□□□□□ -0.28
USP43-201ENST00000285199 TMEM56Q96MV1 263 aa13.32□□□□□ -0.28
USP43-201ENST00000285199 TMEM56-RWDD3S4R434 201 aa13.32□□□□□ -0.28
USP43-201ENST00000285199 A0A1W2PR77 199 aa13.31□□□□□ -0.28
USP43-201ENST00000285199 ANOS1P23352 680 aa13.31□□□□□ -0.28
USP43-201ENST00000285199 ADMP35318 185 aa13.31□□□□□ -0.28
USP43-201ENST00000285199 GPR6P46095 362 aaPredicted RBP13.31□□□□□ -0.28
USP43-201ENST00000285199 KCNMB1Q16558 191 aa13.31□□□□□ -0.28
USP43-201ENST00000285199 TMEM251Q8N6I4 163 aa13.31□□□□□ -0.28
USP43-201ENST00000285199 OR4S2Q8NH73 311 aa13.31□□□□□ -0.28
USP43-201ENST00000285199 PMCHL2Q9BQD1 86 aa13.31□□□□□ -0.28
USP43-201ENST00000285199 ARRDC1-AS1Q9H2J1 176 aa13.31□□□□□ -0.28
USP43-201ENST00000285199 IL19Q9UHD0 177 aa13.31□□□□□ -0.28
USP43-201ENST00000285199 LOC389332A0A1B0GUA5 103 aa13.31□□□□□ -0.28
USP43-201ENST00000285199 TMPRSS2O15393 492 aa13.31□□□□□ -0.28
USP43-201ENST00000285199 OR2J3O76001 311 aa13.31□□□□□ -0.28
USP43-201ENST00000285199 KRTCAP3Q53RY4 240 aa13.31□□□□□ -0.28
USP43-201ENST00000285199 DNM1P46Q6ZS02 220 aa13.31□□□□□ -0.28
USP43-201ENST00000285199 CCL17Q92583 94 aa13.31□□□□□ -0.28
USP43-201ENST00000285199 GTF3C1Q12789 2109 aa13.31□□□□□ -0.28
USP43-201ENST00000285199 IGHV3-72A0A0B4J1Y9 119 aa13.31□□□□□ -0.28
USP43-201ENST00000285199 CA1P00915 261 aaPredicted RBP13.31□□□□□ -0.28
USP43-201ENST00000285199 PCOLCEQ15113 449 aa13.31□□□□□ -0.28
USP43-201ENST00000285199 RPL39P5Q59GN2 51 aa13.31□□□□□ -0.28
USP43-201ENST00000285199 GTF2H5Q6ZYL4 71 aa13.31□□□□□ -0.28
USP43-201ENST00000285199 RAB37Q96AX2 223 aa13.31□□□□□ -0.28
USP43-201ENST00000285199 RNASE7Q9H1E1 156 aaKnown RBP13.31□□□□□ -0.28
USP43-201ENST00000285199 ARL16Q0P5N6 197 aa13.3□□□□□ -0.28
USP43-201ENST00000285199 VWA1Q6PCB0 445 aa13.3□□□□□ -0.28
USP43-201ENST00000285199 PSMG3Q9BT73 122 aaPredicted RBP13.3□□□□□ -0.28
USP43-201ENST00000285199 UQCR10Q9UDW1 63 aa13.3□□□□□ -0.28
USP43-201ENST00000285199 IGHV1-45A0A0A0MS14 117 aa13.3□□□□□ -0.28
USP43-201ENST00000285199 RNPS1Q15287 305 aaKnown RBP13.3□□□□□ -0.28
USP43-201ENST00000285199 OR2M7Q8NG81 312 aa13.3□□□□□ -0.28
USP43-201ENST00000285199 WDYHV1Q96HA8 205 aa13.3□□□□□ -0.28
USP43-201ENST00000285199 TMEM167BQ9NRX6 74 aa13.3□□□□□ -0.28
USP43-201ENST00000285199 C5orf42Q9H799 3197 aa13.3□□□□□ -0.28
USP43-201ENST00000285199 COL8A1P27658 744 aa13.3□□□□□ -0.28
USP43-201ENST00000285199 GNB2P62879 340 aa13.3□□□□□ -0.28
USP43-201ENST00000285199 CENPWQ5EE01 88 aa13.3□□□□□ -0.28
USP43-201ENST00000285199 CARFQ8N187 725 aa13.3□□□□□ -0.28
USP43-201ENST00000285199 NFAM1Q8NET5 270 aaPredicted RBP13.3□□□□□ -0.28
USP43-201ENST00000285199 FAM122AQ96E09 287 aa13.3□□□□□ -0.28
USP43-201ENST00000285199 PLPPR1Q8TBJ4 325 aa13.29□□□□□ -0.28
USP43-201ENST00000285199 TMEM54Q969K7 222 aa13.29□□□□□ -0.28
USP43-201ENST00000285199 GSX1Q9H4S2 264 aaPredicted RBP13.29□□□□□ -0.28
USP43-201ENST00000285199 PNRC2Q9NPJ4 139 aaKnown RBP13.29□□□□□ -0.28
USP43-201ENST00000285199 DPRXA6NFQ7 191 aa13.29□□□□□ -0.28
USP43-201ENST00000285199 C12orf77C9JDV5 145 aa13.29□□□□□ -0.28
USP43-201ENST00000285199 LYZP61626 148 aa13.29□□□□□ -0.28
USP43-201ENST00000285199 TMEM170AQ8WVE7 144 aa13.29□□□□□ -0.28
USP43-201ENST00000285199 PCNX3Q9H6A9 2034 aa13.29□□□□□ -0.28
USP43-201ENST00000285199 SEBOXQ9HB31 216 aaPredicted RBP13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 140.3 ms