RNA–Protein interactions for RNA: ENST00000262215.7

ARFGEF1-201, Transcript of ADP ribosylation factor guanine nucleotide exchange factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ARFGEF1, Length 7,225 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGEF1-201ENST00000262215 ZIC1Q15915 447 aa10.68□□□□□ -0.7
ARFGEF1-201ENST00000262215 TIAM2Q8IVF5 1701 aa10.68□□□□□ -0.7
ARFGEF1-201ENST00000262215 H0Y980 276 aa10.68□□□□□ -0.7
ARFGEF1-201ENST00000262215 HOXA5P20719 270 aa10.68□□□□□ -0.7
ARFGEF1-201ENST00000262215 SELENOHQ8IZQ5 122 aaKnown RBP10.68□□□□□ -0.7
ARFGEF1-201ENST00000262215 C2orf88Q9BSF0 95 aa10.68□□□□□ -0.7
ARFGEF1-201ENST00000262215 ASAH2BP0C7U1 165 aa10.68□□□□□ -0.7
ARFGEF1-201ENST00000262215 GLIPR1P48060 266 aa10.68□□□□□ -0.7
ARFGEF1-201ENST00000262215 LINC00596Q86U02 117 aa10.68□□□□□ -0.7
ARFGEF1-201ENST00000262215 FNDC4Q9H6D8 234 aaPredicted RBP10.68□□□□□ -0.7
ARFGEF1-201ENST00000262215 PEF1Q9UBV8 284 aaKnown RBP10.68□□□□□ -0.7
ARFGEF1-201ENST00000262215 LRP6O75581 1613 aa10.68□□□□□ -0.7
ARFGEF1-201ENST00000262215 RPL34P49207 117 aaKnown RBP10.67□□□□□ -0.7
ARFGEF1-201ENST00000262215 JMJD8Q96S16 334 aa10.67□□□□□ -0.7
ARFGEF1-201ENST00000262215 NXT2Q9NPJ8 142 aaKnown RBP10.67□□□□□ -0.7
ARFGEF1-201ENST00000262215 MBD1Q9UIS9 605 aaPredicted RBP10.67□□□□□ -0.7
ARFGEF1-201ENST00000262215 SPCS1Q9Y6A9 102 aa10.67□□□□□ -0.7
ARFGEF1-201ENST00000262215 A0A1W2PQM1 296 aa10.67□□□□□ -0.7
ARFGEF1-201ENST00000262215 PAX2Q02962 417 aa10.67□□□□□ -0.7
ARFGEF1-201ENST00000262215 PPP1R3EQ9H7J1 279 aa10.67□□□□□ -0.7
ARFGEF1-201ENST00000262215 WDR54Q9H977 334 aa10.67□□□□□ -0.7
ARFGEF1-201ENST00000262215 CLDN16Q9Y5I7 305 aa10.67□□□□□ -0.7
ARFGEF1-201ENST00000262215 LOC105371242A0A075B767 164 aa10.67□□□□□ -0.7
ARFGEF1-201ENST00000262215 FAM89BQ8N5H3 189 aa10.67□□□□□ -0.7
ARFGEF1-201ENST00000262215 C11orf44Q8N8P7 122 aa10.67□□□□□ -0.7
ARFGEF1-201ENST00000262215 TMEM222Q9H0R3 208 aa10.67□□□□□ -0.7
ARFGEF1-201ENST00000262215 RAB9AP51151 201 aa10.67□□□□□ -0.7
ARFGEF1-201ENST00000262215 P2RY4P51582 365 aa10.67□□□□□ -0.7
ARFGEF1-201ENST00000262215 TTC9CQ8N5M4 171 aa10.67□□□□□ -0.7
ARFGEF1-201ENST00000262215 RBMY1BA6NDE4 496 aaKnown RBP10.67□□□□□ -0.7
ARFGEF1-201ENST00000262215 RBMY1EA6NEQ0 496 aaKnown RBP10.67□□□□□ -0.7
ARFGEF1-201ENST00000262215 SPINT1O43278 529 aa10.67□□□□□ -0.7
ARFGEF1-201ENST00000262215 RBMY1DP0C7P1 496 aaKnown RBP10.67□□□□□ -0.7
ARFGEF1-201ENST00000262215 RBMY1A1P0DJD3 496 aaKnown RBP10.67□□□□□ -0.7
ARFGEF1-201ENST00000262215 RBMY1CP0DJD4 496 aa10.67□□□□□ -0.7
ARFGEF1-201ENST00000262215 CRYBA2P53672 197 aa10.67□□□□□ -0.7
ARFGEF1-201ENST00000262215 SELENOTP62341 195 aa10.67□□□□□ -0.7
ARFGEF1-201ENST00000262215 ATP1A1-AS1Q5TC04 95 aa10.67□□□□□ -0.7
ARFGEF1-201ENST00000262215 LINC01560Q8TB33 94 aa10.67□□□□□ -0.7
ARFGEF1-201ENST00000262215 NABP2Q9BQ15 211 aa10.67□□□□□ -0.7
ARFGEF1-201ENST00000262215 LNP1A1A4G5 178 aa10.67□□□□□ -0.7
ARFGEF1-201ENST00000262215 MARCH11A6NNE9 402 aa10.67□□□□□ -0.7
ARFGEF1-201ENST00000262215 SYNGR3O43761 229 aa10.67□□□□□ -0.7
ARFGEF1-201ENST00000262215 IGHV3-11P01762 117 aa10.67□□□□□ -0.7
ARFGEF1-201ENST00000262215 RPS20P60866 119 aaKnown RBP10.67□□□□□ -0.7
ARFGEF1-201ENST00000262215 FGF12P61328 243 aa10.67□□□□□ -0.7
ARFGEF1-201ENST00000262215 A0A1W2PQD3 144 aa10.66□□□□□ -0.7
ARFGEF1-201ENST00000262215 IGKV1D-16P01601 117 aa10.66□□□□□ -0.7
ARFGEF1-201ENST00000262215 C8orf82Q6P1X6 216 aaPredicted RBP10.66□□□□□ -0.7
ARFGEF1-201ENST00000262215 EEF1AKMT3Q96AZ1 226 aa10.66□□□□□ -0.7
ARFGEF1-201ENST00000262215 IGLV3-16A0A075B6K0 115 aa10.66□□□□□ -0.7
ARFGEF1-201ENST00000262215 H3BUT2 72 aa10.66□□□□□ -0.7
ARFGEF1-201ENST00000262215 PCSK4Q6UW60 755 aa10.66□□□□□ -0.7
ARFGEF1-201ENST00000262215 MARS2Q96GW9 593 aaKnown RBP10.66□□□□□ -0.7
ARFGEF1-201ENST00000262215 AICDAQ9GZX7 198 aa10.66□□□□□ -0.7
ARFGEF1-201ENST00000262215 CCDC88CQ9P219 2028 aa10.66□□□□□ -0.7
ARFGEF1-201ENST00000262215 TMPRSS3P57727 454 aa10.66□□□□□ -0.7
ARFGEF1-201ENST00000262215 AMELYQ99218 206 aa10.66□□□□□ -0.7
ARFGEF1-201ENST00000262215 FOXA2Q9Y261 457 aaPredicted RBP10.66□□□□□ -0.7
ARFGEF1-201ENST00000262215 CCL19Q99731 98 aa10.66□□□□□ -0.7
ARFGEF1-201ENST00000262215 CLEC7AQ9BXN2 247 aa10.66□□□□□ -0.7
ARFGEF1-201ENST00000262215 RPL39P5Q59GN2 51 aa10.66□□□□□ -0.7
ARFGEF1-201ENST00000262215 A0A1W2PPC1 479 aa10.66□□□□□ -0.7
ARFGEF1-201ENST00000262215 PEX7O00628 323 aa10.66□□□□□ -0.7
ARFGEF1-201ENST00000262215 TSPAN7P41732 249 aa10.66□□□□□ -0.7
ARFGEF1-201ENST00000262215 PDLIM4P50479 330 aa10.66□□□□□ -0.7
ARFGEF1-201ENST00000262215 CA11O75493 328 aa10.65□□□□□ -0.7
ARFGEF1-201ENST00000262215 TNFRSF9Q07011 255 aa10.65□□□□□ -0.7
ARFGEF1-201ENST00000262215 PRR31Q5SQ13 230 aa10.65□□□□□ -0.7
ARFGEF1-201ENST00000262215 SHISA5Q8N114 240 aa10.65□□□□□ -0.7
ARFGEF1-201ENST00000262215 ZNF48Q96MX3 618 aaPredicted RBP10.65□□□□□ -0.7
ARFGEF1-201ENST00000262215 SRSF4Q08170 494 aaKnown RBP10.65□□□□□ -0.7
ARFGEF1-201ENST00000262215 ZNF345Q14585 488 aa10.65□□□□□ -0.7
ARFGEF1-201ENST00000262215 C3orf36Q3SXR2 165 aa10.65□□□□□ -0.7
ARFGEF1-201ENST00000262215 SLC25A20O43772 301 aa10.65□□□□□ -0.7
ARFGEF1-201ENST00000262215 TMEM50AO95807 157 aa10.65□□□□□ -0.7
ARFGEF1-201ENST00000262215 LHX2P50458 406 aa10.65□□□□□ -0.7
ARFGEF1-201ENST00000262215 LHX8Q68G74 356 aa10.65□□□□□ -0.7
ARFGEF1-201ENST00000262215 NIT1Q86X76 327 aa10.65□□□□□ -0.7
ARFGEF1-201ENST00000262215 PHLDA1Q8WV24 401 aaPredicted RBP10.65□□□□□ -0.7
ARFGEF1-201ENST00000262215 HIST1H2BAQ96A08 127 aa10.65□□□□□ -0.7
ARFGEF1-201ENST00000262215 ODAMA1E959 279 aa10.65□□□□□ -0.7
ARFGEF1-201ENST00000262215 C1orf122Q6ZSJ8 110 aa10.65□□□□□ -0.7
ARFGEF1-201ENST00000262215 FAM206AQ9NX38 181 aa10.65□□□□□ -0.7
ARFGEF1-201ENST00000262215 NPIPB8E9PQR5 432 aa10.65□□□□□ -0.71
ARFGEF1-201ENST00000262215 NPIPB9F8W1W9 429 aa10.65□□□□□ -0.71
ARFGEF1-201ENST00000262215 NPIPB7O75200 414 aa10.65□□□□□ -0.71
ARFGEF1-201ENST00000262215 DLL3Q9NYJ7 618 aa10.65□□□□□ -0.71
ARFGEF1-201ENST00000262215 TRAV2A0A0B4J234 112 aa10.64□□□□□ -0.71
ARFGEF1-201ENST00000262215 CGAP01215 116 aa10.64□□□□□ -0.71
ARFGEF1-201ENST00000262215 TNFSF10P50591 281 aa10.64□□□□□ -0.71
ARFGEF1-201ENST00000262215 TDGF1P3P51864 188 aa10.64□□□□□ -0.71
ARFGEF1-201ENST00000262215 MTURNQ8N3F0 131 aa10.64□□□□□ -0.71
ARFGEF1-201ENST00000262215 CXCL10P02778 98 aa10.64□□□□□ -0.71
ARFGEF1-201ENST00000262215 ASIPP42127 132 aa10.64□□□□□ -0.71
ARFGEF1-201ENST00000262215 HSPE1P61604 102 aaKnown RBP10.64□□□□□ -0.71
ARFGEF1-201ENST00000262215 ZNRF1Q8ND25 227 aa10.64□□□□□ -0.71
ARFGEF1-201ENST00000262215 C21orf140B9A014 251 aa10.64□□□□□ -0.71
ARFGEF1-201ENST00000262215 TMEM250H0YL14 139 aa10.64□□□□□ -0.71
ARFGEF1-201ENST00000262215 SAMD13Q5VXD3 122 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms