RNA–Protein interactions for RNA: ENST00000250448.2

FOXA1-201, Transcript of forkhead box A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FOXA1, Length 2,862 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA1-201ENST00000250448 ZNF497Q6ZNH5 498 aa14.2□□□□□ -0.14
FOXA1-201ENST00000250448 FGFRL1Q8N441 504 aa14.2□□□□□ -0.14
FOXA1-201ENST00000250448 OR4F5Q8NH21 305 aa14.2□□□□□ -0.14
FOXA1-201ENST00000250448 ACY3Q96HD9 319 aa14.2□□□□□ -0.14
FOXA1-201ENST00000250448 OR4F4Q96R69 305 aa14.2□□□□□ -0.14
FOXA1-201ENST00000250448 MANBALQ9NQG1 85 aa14.2□□□□□ -0.14
FOXA1-201ENST00000250448 A0A1W2PPQ1 181 aa14.2□□□□□ -0.14
FOXA1-201ENST00000250448 RNF212BA8MTL3 300 aa14.2□□□□□ -0.14
FOXA1-201ENST00000250448 CA6P23280 308 aa14.2□□□□□ -0.14
FOXA1-201ENST00000250448 TDGF1P3P51864 188 aa14.2□□□□□ -0.14
FOXA1-201ENST00000250448 GATAD1Q8WUU5 269 aa14.2□□□□□ -0.14
FOXA1-201ENST00000250448 NOL4LQ96MY1 436 aaPredicted RBP14.2□□□□□ -0.14
FOXA1-201ENST00000250448 C2orf88Q9BSF0 95 aa14.2□□□□□ -0.14
FOXA1-201ENST00000250448 TMEM147Q9BVK8 224 aa14.2□□□□□ -0.14
FOXA1-201ENST00000250448 A8MWP6 167 aa14.19□□□□□ -0.14
FOXA1-201ENST00000250448 CGAP01215 116 aa14.19□□□□□ -0.14
FOXA1-201ENST00000250448 CLEC12BQ2HXU8 276 aa14.19□□□□□ -0.14
FOXA1-201ENST00000250448 MISP3Q96FF7 219 aa14.19□□□□□ -0.14
FOXA1-201ENST00000250448 PLSCR4Q9NRQ2 329 aa14.19□□□□□ -0.14
FOXA1-201ENST00000250448 HSPB7Q9UBY9 170 aa14.19□□□□□ -0.14
FOXA1-201ENST00000250448 OR2H2O95918 312 aa14.19□□□□□ -0.14
FOXA1-201ENST00000250448 GYPAP02724 150 aa14.19□□□□□ -0.14
FOXA1-201ENST00000250448 PDLIM4P50479 330 aa14.19□□□□□ -0.14
FOXA1-201ENST00000250448 ZNF664Q8N3J9 261 aa14.19□□□□□ -0.14
FOXA1-201ENST00000250448 OR10G9Q8NGN4 311 aa14.19□□□□□ -0.14
FOXA1-201ENST00000250448 OR10G7Q8NGN6 311 aa14.19□□□□□ -0.14
FOXA1-201ENST00000250448 FAM57AQ8TBR7 257 aa14.19□□□□□ -0.14
FOXA1-201ENST00000250448 NANOS1Q8WY41 292 aaKnown RBP14.19□□□□□ -0.14
FOXA1-201ENST00000250448 ANAPC16Q96DE5 110 aa14.19□□□□□ -0.14
FOXA1-201ENST00000250448 GCGP01275 180 aa14.18□□□□□ -0.14
FOXA1-201ENST00000250448 CEACAM6P40199 344 aa14.18□□□□□ -0.14
FOXA1-201ENST00000250448 RAB4BP61018 213 aa14.18□□□□□ -0.14
FOXA1-201ENST00000250448 LBHQ53QV2 105 aaPredicted RBP14.18□□□□□ -0.14
FOXA1-201ENST00000250448 KRTCAP3Q53RY4 240 aa14.18□□□□□ -0.14
FOXA1-201ENST00000250448 ACTL10Q5JWF8 245 aa14.18□□□□□ -0.14
FOXA1-201ENST00000250448 GFRALQ6UXV0 394 aa14.18□□□□□ -0.14
FOXA1-201ENST00000250448 HEATR1Q9H583 2144 aaKnown RBP14.18□□□□□ -0.14
FOXA1-201ENST00000250448 ATP6V1FQ16864 119 aa14.18□□□□□ -0.14
FOXA1-201ENST00000250448 FFAR4Q5NUL3 377 aa14.18□□□□□ -0.14
FOXA1-201ENST00000250448 GGCTO75223 188 aaKnown RBP14.17□□□□□ -0.14
FOXA1-201ENST00000250448 DOLPP1Q86YN1 238 aa14.17□□□□□ -0.14
FOXA1-201ENST00000250448 WDR31Q8NA23 367 aa14.17□□□□□ -0.14
FOXA1-201ENST00000250448 OR2T10Q8NGZ9 312 aa14.17□□□□□ -0.14
FOXA1-201ENST00000250448 NDUFAF3Q9BU61 184 aa14.17□□□□□ -0.14
FOXA1-201ENST00000250448 FUT9Q9Y231 359 aa14.17□□□□□ -0.14
FOXA1-201ENST00000250448 ZNF705GA8MUZ8 300 aaPredicted RBP14.17□□□□□ -0.14
FOXA1-201ENST00000250448 BMP5P22003 454 aa14.17□□□□□ -0.14
FOXA1-201ENST00000250448 MSMO1Q15800 293 aa14.17□□□□□ -0.14
FOXA1-201ENST00000250448 ZNF474Q6S9Z5 364 aaPredicted RBP14.17□□□□□ -0.14
FOXA1-201ENST00000250448 NEIL1Q96FI4 390 aaPredicted RBP14.17□□□□□ -0.14
FOXA1-201ENST00000250448 CLN8Q9UBY8 286 aa14.17□□□□□ -0.14
FOXA1-201ENST00000250448 SMG1Q96Q15 3661 aaKnown RBP14.17□□□□□ -0.14
FOXA1-201ENST00000250448 COX5AP20674 150 aa14.16□□□□□ -0.14
FOXA1-201ENST00000250448 TFF3Q07654 80 aa14.16□□□□□ -0.14
FOXA1-201ENST00000250448 ACOT6Q3I5F7 207 aaPredicted RBP14.16□□□□□ -0.14
FOXA1-201ENST00000250448 TMEM37Q8WXS4 190 aa14.16□□□□□ -0.14
FOXA1-201ENST00000250448 MBNL3Q9NUK0 354 aaKnown RBP14.16□□□□□ -0.14
FOXA1-201ENST00000250448 KALRNO60229 2985 aa14.16□□□□□ -0.14
FOXA1-201ENST00000250448 SRP14P37108 136 aaKnown RBP14.16□□□□□ -0.14
FOXA1-201ENST00000250448 RTL8AQ9BWD3 113 aa14.16□□□□□ -0.14
FOXA1-201ENST00000250448 RAMP3O60896 148 aa14.16□□□□□ -0.14
FOXA1-201ENST00000250448 TYMSP04818 313 aa14.16□□□□□ -0.14
FOXA1-201ENST00000250448 P0C879 139 aa14.16□□□□□ -0.14
FOXA1-201ENST00000250448 G6PCP35575 357 aa14.16□□□□□ -0.14
FOXA1-201ENST00000250448 WDR86Q86TI4 376 aa14.16□□□□□ -0.14
FOXA1-201ENST00000250448 OR6C3Q9NZP0 311 aa14.16□□□□□ -0.14
FOXA1-201ENST00000250448 WIPI2Q9Y4P8 454 aa14.16□□□□□ -0.14
FOXA1-201ENST00000250448 ICE1Q9Y2F5 2266 aa14.15□□□□□ -0.14
FOXA1-201ENST00000250448 PMS2P5A8MQ11 134 aa14.15□□□□□ -0.14
FOXA1-201ENST00000250448 PAGE4O60829 102 aa14.15□□□□□ -0.14
FOXA1-201ENST00000250448 VENTXO95231 258 aa14.15□□□□□ -0.14
FOXA1-201ENST00000250448 SNRPCP09234 159 aaKnown RBP14.15□□□□□ -0.14
FOXA1-201ENST00000250448 UCNP55089 124 aa14.15□□□□□ -0.14
FOXA1-201ENST00000250448 TBC1D28Q2M2D7 210 aa14.15□□□□□ -0.14
FOXA1-201ENST00000250448 Q8IYB0 196 aa14.15□□□□□ -0.14
FOXA1-201ENST00000250448 TMEM18Q96B42 140 aa14.15□□□□□ -0.14
FOXA1-201ENST00000250448 MRPL37Q9BZE1 423 aaKnown RBP14.15□□□□□ -0.14
FOXA1-201ENST00000250448 ODAMA1E959 279 aa14.15□□□□□ -0.14
FOXA1-201ENST00000250448 KRASP01116 189 aa14.15□□□□□ -0.14
FOXA1-201ENST00000250448 ZNF645Q8N7E2 425 aa14.15□□□□□ -0.14
FOXA1-201ENST00000250448 PKD1L2Q7Z442 2459 aa14.14□□□□□ -0.15
FOXA1-201ENST00000250448 IGHV3-64DA0A0J9YX35 117 aa14.14□□□□□ -0.15
FOXA1-201ENST00000250448 LRRC30A6NM36 301 aa14.14□□□□□ -0.15
FOXA1-201ENST00000250448 PRRG2O14669 202 aa14.14□□□□□ -0.15
FOXA1-201ENST00000250448 ZNF816Q0VGE8 651 aaPredicted RBP14.14□□□□□ -0.15
FOXA1-201ENST00000250448 USF2Q15853 346 aaPredicted RBP14.14□□□□□ -0.15
FOXA1-201ENST00000250448 BEND2Q8NDZ0 799 aa14.14□□□□□ -0.15
FOXA1-201ENST00000250448 OR10P1Q8NGE3 313 aa14.14□□□□□ -0.15
FOXA1-201ENST00000250448 NPCDR1Q9BY65 106 aa14.14□□□□□ -0.15
FOXA1-201ENST00000250448 OR2J1Q9GZK6 312 aa14.14□□□□□ -0.15
FOXA1-201ENST00000250448 ERVK11-1P61568 191 aa14.14□□□□□ -0.15
FOXA1-201ENST00000250448 ALKBH6Q3KRA9 238 aa14.14□□□□□ -0.15
FOXA1-201ENST00000250448 KCNIP4Q6PIL6 250 aa14.14□□□□□ -0.15
FOXA1-201ENST00000250448 BHLHA15Q7RTS1 189 aaPredicted RBP14.14□□□□□ -0.15
FOXA1-201ENST00000250448 SCCPDHQ8NBX0 429 aa14.14□□□□□ -0.15
FOXA1-201ENST00000250448 C5orf30Q96GV9 206 aa14.14□□□□□ -0.15
FOXA1-201ENST00000250448 OR2D2Q9H210 308 aa14.14□□□□□ -0.15
FOXA1-201ENST00000250448 CTNNBIP1Q9NSA3 81 aaPredicted RBP14.14□□□□□ -0.15
FOXA1-201ENST00000250448 DIDO1Q9BTC0 2240 aaKnown RBP14.13□□□□□ -0.15
FOXA1-201ENST00000250448 ZG16O60844 167 aa14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms