RNA–Protein interactions for RNA: ENST00000229328.9

PRKAB1-201, Transcript of protein kinase AMP-activated non-catalytic subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRKAB1, Length 2,610 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKAB1-201ENST00000229328 PLA2G5P39877 138 aa11.85□□□□□ -0.51
PRKAB1-201ENST00000229328 RPL31P62899 125 aaKnown RBP11.85□□□□□ -0.51
PRKAB1-201ENST00000229328 HNF4GQ14541 408 aa11.85□□□□□ -0.51
PRKAB1-201ENST00000229328 FBXL19-AS1Q494R0 122 aa11.85□□□□□ -0.51
PRKAB1-201ENST00000229328 SP5Q6BEB4 398 aaPredicted RBP11.85□□□□□ -0.51
PRKAB1-201ENST00000229328 TMEM88Q6PEY1 159 aa11.85□□□□□ -0.51
PRKAB1-201ENST00000229328 ZNF383Q8NA42 475 aa11.85□□□□□ -0.51
PRKAB1-201ENST00000229328 RARRES2Q99969 163 aa11.85□□□□□ -0.51
PRKAB1-201ENST00000229328 WDR61Q9GZS3 305 aaKnown RBP11.85□□□□□ -0.51
PRKAB1-201ENST00000229328 CTSZQ9UBR2 303 aa11.85□□□□□ -0.51
PRKAB1-201ENST00000229328 UBE2L5PA0A1B0GUS4 154 aa11.84□□□□□ -0.51
PRKAB1-201ENST00000229328 TMEM200BQ69YZ2 307 aa11.84□□□□□ -0.51
PRKAB1-201ENST00000229328 MS4A5Q9H3V2 200 aa11.84□□□□□ -0.51
PRKAB1-201ENST00000229328 CISD1Q9NZ45 108 aaKnown RBP11.84□□□□□ -0.51
PRKAB1-201ENST00000229328 NDRG3Q9UGV2 375 aa11.84□□□□□ -0.51
PRKAB1-201ENST00000229328 COL6A6A6NMZ7 2263 aa11.84□□□□□ -0.51
PRKAB1-201ENST00000229328 PIEZO1Q92508 2521 aa11.84□□□□□ -0.51
PRKAB1-201ENST00000229328 ANKHD1Q8IWZ3 2542 aaKnown RBP11.84□□□□□ -0.51
PRKAB1-201ENST00000229328 PEA15Q15121 130 aa11.84□□□□□ -0.51
PRKAB1-201ENST00000229328 IFNA17P01571 189 aa11.83□□□□□ -0.52
PRKAB1-201ENST00000229328 NQO2P16083 231 aa11.83□□□□□ -0.52
PRKAB1-201ENST00000229328 EFNB3Q15768 340 aa11.83□□□□□ -0.52
PRKAB1-201ENST00000229328 SLC25A48Q6ZT89 311 aaKnown RBP11.83□□□□□ -0.52
PRKAB1-201ENST00000229328 CBLN2Q8IUK8 224 aa11.83□□□□□ -0.52
PRKAB1-201ENST00000229328 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.83□□□□□ -0.52
PRKAB1-201ENST00000229328 SFT2D1Q8WV19 159 aa11.83□□□□□ -0.52
PRKAB1-201ENST00000229328 ZCCHC14Q8WYQ9 949 aaKnown RBP11.83□□□□□ -0.52
PRKAB1-201ENST00000229328 RPRMQ9NS64 109 aa11.83□□□□□ -0.52
PRKAB1-201ENST00000229328 TMEM140Q9NV12 185 aa11.83□□□□□ -0.52
PRKAB1-201ENST00000229328 B9A039 149 aa11.83□□□□□ -0.52
PRKAB1-201ENST00000229328 RELBQ01201 579 aa11.83□□□□□ -0.52
PRKAB1-201ENST00000229328 LY6DQ14210 128 aa11.83□□□□□ -0.52
PRKAB1-201ENST00000229328 AARDQ4LEZ3 155 aa11.83□□□□□ -0.52
PRKAB1-201ENST00000229328 OR4A16Q8NH70 328 aa11.83□□□□□ -0.52
PRKAB1-201ENST00000229328 H1FXQ92522 213 aaKnown RBP11.83□□□□□ -0.52
PRKAB1-201ENST00000229328 TAF15Q92804 592 aaKnown RBP eCLIP11.83□□□□□ -0.52
PRKAB1-201ENST00000229328 LYNX1G3V0Z9 82 aa11.82□□□□□ -0.52
PRKAB1-201ENST00000229328 DLL1O00548 723 aa11.82□□□□□ -0.52
PRKAB1-201ENST00000229328 SNAPINO95295 136 aa11.82□□□□□ -0.52
PRKAB1-201ENST00000229328 LYNX1P0DP58 116 aa11.82□□□□□ -0.52
PRKAB1-201ENST00000229328 MEF2CQ06413 473 aaPredicted RBP11.82□□□□□ -0.52
PRKAB1-201ENST00000229328 SSX7Q7RTT5 188 aa11.82□□□□□ -0.52
PRKAB1-201ENST00000229328 OR4S2Q8NH73 311 aa11.82□□□□□ -0.52
PRKAB1-201ENST00000229328 DCHS2Q6V1P9 2916 aa11.82□□□□□ -0.52
PRKAB1-201ENST00000229328 IGHV1-69-2A0A0G2JMI3 117 aa11.82□□□□□ -0.52
PRKAB1-201ENST00000229328 C15orf62A8K5M9 175 aa11.82□□□□□ -0.52
PRKAB1-201ENST00000229328 LINC00587B1AMM8 73 aa11.82□□□□□ -0.52
PRKAB1-201ENST00000229328 DVL1O14640 695 aa11.82□□□□□ -0.52
PRKAB1-201ENST00000229328 KIR2DS2P43631 304 aa11.82□□□□□ -0.52
PRKAB1-201ENST00000229328 THBS3P49746 956 aa11.82□□□□□ -0.52
PRKAB1-201ENST00000229328 ERVK-16P61578 105 aa11.82□□□□□ -0.52
PRKAB1-201ENST00000229328 ZNF726P1Q15940 193 aa11.82□□□□□ -0.52
PRKAB1-201ENST00000229328 LFNGQ8NES3 379 aa11.82□□□□□ -0.52
PRKAB1-201ENST00000229328 CIB3Q96Q77 187 aaPredicted RBP11.82□□□□□ -0.52
PRKAB1-201ENST00000229328 FAM90A9PA6NNJ1 464 aa11.81□□□□□ -0.52
PRKAB1-201ENST00000229328 NDUFB3O43676 98 aa11.81□□□□□ -0.52
PRKAB1-201ENST00000229328 EIF3GO75821 320 aaKnown RBP eCLIP11.81□□□□□ -0.52
PRKAB1-201ENST00000229328 OR8U8P0C7N1 319 aa11.81□□□□□ -0.52
PRKAB1-201ENST00000229328 CT45A6P0DMU7 189 aa11.81□□□□□ -0.52
PRKAB1-201ENST00000229328 CT45A5P0DMU8 189 aa11.81□□□□□ -0.52
PRKAB1-201ENST00000229328 CT45A7P0DMV0 189 aa11.81□□□□□ -0.52
PRKAB1-201ENST00000229328 MEOX2P50222 304 aa11.81□□□□□ -0.52
PRKAB1-201ENST00000229328 ETV3LQ6ZN32 361 aa11.81□□□□□ -0.52
PRKAB1-201ENST00000229328 ZNF714Q96N38 554 aa11.81□□□□□ -0.52
PRKAB1-201ENST00000229328 PSMG3Q9BT73 122 aaPredicted RBP11.81□□□□□ -0.52
PRKAB1-201ENST00000229328 PBDC1Q9BVG4 233 aa11.81□□□□□ -0.52
PRKAB1-201ENST00000229328 GAL3ST2Q9H3Q3 398 aa11.81□□□□□ -0.52
PRKAB1-201ENST00000229328 TET2Q6N021 2002 aaPredicted RBP11.81□□□□□ -0.52
PRKAB1-201ENST00000229328 TRAV20A0A0B4J274 112 aa11.81□□□□□ -0.52
PRKAB1-201ENST00000229328 RBFOX3A6NFN3 312 aa11.81□□□□□ -0.52
PRKAB1-201ENST00000229328 ELLP55199 621 aaPredicted RBP11.81□□□□□ -0.52
PRKAB1-201ENST00000229328 TLE4Q04727 773 aa11.81□□□□□ -0.52
PRKAB1-201ENST00000229328 HAGHQ16775 308 aa11.81□□□□□ -0.52
PRKAB1-201ENST00000229328 OR10P1Q8NGE3 313 aa11.81□□□□□ -0.52
PRKAB1-201ENST00000229328 RHOVQ96L33 236 aa11.81□□□□□ -0.52
PRKAB1-201ENST00000229328 PARD6GQ9BYG4 376 aaPredicted RBP11.81□□□□□ -0.52
PRKAB1-201ENST00000229328 A0A1B0GW64 132 aa11.8□□□□□ -0.52
PRKAB1-201ENST00000229328 OR13C7P0DN81 318 aa11.8□□□□□ -0.52
PRKAB1-201ENST00000229328 LOXP28300 417 aaPredicted RBP11.8□□□□□ -0.52
PRKAB1-201ENST00000229328 TFF3Q07654 80 aa11.8□□□□□ -0.52
PRKAB1-201ENST00000229328 DPPA3Q6W0C5 159 aa11.8□□□□□ -0.52
PRKAB1-201ENST00000229328 HEPN1Q6WQI6 88 aa11.8□□□□□ -0.52
PRKAB1-201ENST00000229328 MUC15Q8N387 334 aa11.8□□□□□ -0.52
PRKAB1-201ENST00000229328 IGKV1-16P04430 117 aa11.8□□□□□ -0.52
PRKAB1-201ENST00000229328 MYOD1P15172 320 aa11.8□□□□□ -0.52
PRKAB1-201ENST00000229328 SPCS3P61009 180 aa11.8□□□□□ -0.52
PRKAB1-201ENST00000229328 TMEM30BQ3MIR4 351 aa11.8□□□□□ -0.52
PRKAB1-201ENST00000229328 LRRC10Q5BKY1 277 aa11.8□□□□□ -0.52
PRKAB1-201ENST00000229328 OR4A47Q6IF82 309 aa11.8□□□□□ -0.52
PRKAB1-201ENST00000229328 CA5BP1Q8WTZ4 195 aa11.8□□□□□ -0.52
PRKAB1-201ENST00000229328 TMEM147Q9BVK8 224 aa11.8□□□□□ -0.52
PRKAB1-201ENST00000229328 KIAA1456Q9P272 454 aa11.8□□□□□ -0.52
PRKAB1-201ENST00000229328 KPTNQ9Y664 436 aa11.8□□□□□ -0.52
PRKAB1-201ENST00000229328 ABCA4P78363 2273 aa11.8□□□□□ -0.52
PRKAB1-201ENST00000229328 COL8A2P25067 703 aa11.79□□□□□ -0.52
PRKAB1-201ENST00000229328 VDAC2P45880 294 aaPredicted RBP11.79□□□□□ -0.52
PRKAB1-201ENST00000229328 SLC35B3Q9H1N7 401 aa11.79□□□□□ -0.52
PRKAB1-201ENST00000229328 HIPK2Q9H2X6 1198 aa11.79□□□□□ -0.52
PRKAB1-201ENST00000229328 HRNRQ86YZ3 2850 aaPredicted RBP11.79□□□□□ -0.52
PRKAB1-201ENST00000229328 BTBD17A6NE02 478 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms