RNA–Protein interactions for RNA: ENST00000003084.10

CFTR-201, Transcript of cystic fibrosis transmembrane conductance regulator, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CFTR, Length 6,132 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFTR-201ENST00000003084 TPRX1Q8N7U7 411 aa3.59□□□□□ -1.83
CFTR-201ENST00000003084 C5orf17Q8NAS9 161 aa3.59□□□□□ -1.83
CFTR-201ENST00000003084 TNFRSF14Q92956 283 aa3.59□□□□□ -1.83
CFTR-201ENST00000003084 TMEM18Q96B42 140 aa3.59□□□□□ -1.83
CFTR-201ENST00000003084 SMDT1Q9H4I9 107 aa3.59□□□□□ -1.83
CFTR-201ENST00000003084 SIRT7Q9NRC8 400 aa3.59□□□□□ -1.83
CFTR-201ENST00000003084 MBD3L4A6NDZ8 208 aaPredicted RBP3.59□□□□□ -1.83
CFTR-201ENST00000003084 MBD3L3A6NE82 208 aaPredicted RBP3.59□□□□□ -1.83
CFTR-201ENST00000003084 MFSD2BA6NFX1 497 aa3.59□□□□□ -1.83
CFTR-201ENST00000003084 MBD3L5A6NJ08 208 aaPredicted RBP3.59□□□□□ -1.83
CFTR-201ENST00000003084 MMP7P09237 267 aaPredicted RBP3.59□□□□□ -1.83
CFTR-201ENST00000003084 RD3LP0DJH9 198 aa3.59□□□□□ -1.83
CFTR-201ENST00000003084 GNLYP22749 145 aa3.59□□□□□ -1.83
CFTR-201ENST00000003084 VDAC2P45880 294 aaPredicted RBP3.59□□□□□ -1.83
CFTR-201ENST00000003084 Q0VFX4 171 aa3.59□□□□□ -1.83
CFTR-201ENST00000003084 RRN3P1Q2M238 152 aa3.59□□□□□ -1.83
CFTR-201ENST00000003084 TM4SF20Q53R12 229 aa3.59□□□□□ -1.83
CFTR-201ENST00000003084 TMEM255AQ5JRV8 349 aa3.59□□□□□ -1.83
CFTR-201ENST00000003084 WFDC3Q8IUB2 231 aa3.59□□□□□ -1.83
CFTR-201ENST00000003084 MBD3L2Q8NHZ7 208 aaPredicted RBP3.59□□□□□ -1.83
CFTR-201ENST00000003084 SLC2A8Q9NY64 477 aa3.59□□□□□ -1.83
CFTR-201ENST00000003084 FNDC1Q4ZHG4 1894 aaPredicted RBP3.59□□□□□ -1.84
CFTR-201ENST00000003084 RAMP1O60894 148 aa3.59□□□□□ -1.84
CFTR-201ENST00000003084 RHBDL1O75783 438 aa3.59□□□□□ -1.84
CFTR-201ENST00000003084 KBTBD11O94819 623 aa3.59□□□□□ -1.84
CFTR-201ENST00000003084 PGA5P0DJD9 388 aa3.59□□□□□ -1.84
CFTR-201ENST00000003084 BATFQ16520 125 aa3.59□□□□□ -1.84
CFTR-201ENST00000003084 SSMEM1Q8WWF3 244 aa3.59□□□□□ -1.84
CFTR-201ENST00000003084 FAM103A1Q9BTL3 118 aaKnown RBP3.59□□□□□ -1.84
CFTR-201ENST00000003084 GGACTQ9BVM4 153 aa3.59□□□□□ -1.84
CFTR-201ENST00000003084 TLNRD1Q9H1K6 362 aa3.59□□□□□ -1.84
CFTR-201ENST00000003084 RCC2Q9P258 522 aaKnown RBP3.59□□□□□ -1.84
CFTR-201ENST00000003084 PXMP4Q9Y6I8 212 aa3.59□□□□□ -1.84
CFTR-201ENST00000003084 TMEM56-RWDD3S4R434 201 aa3.59□□□□□ -1.84
CFTR-201ENST00000003084 OR2J3O76001 311 aa3.58□□□□□ -1.84
CFTR-201ENST00000003084 SLC25A16P16260 332 aa3.58□□□□□ -1.84
CFTR-201ENST00000003084 PSG7Q13046 419 aa3.58□□□□□ -1.84
CFTR-201ENST00000003084 TMEM97Q5BJF2 176 aa3.58□□□□□ -1.84
CFTR-201ENST00000003084 IGFL3Q6UXB1 125 aa3.58□□□□□ -1.84
CFTR-201ENST00000003084 BPIFA4PQ86YQ2 179 aa3.58□□□□□ -1.84
CFTR-201ENST00000003084 H1FOOQ8IZA3 346 aaPredicted RBP3.58□□□□□ -1.84
CFTR-201ENST00000003084 STPG2Q8N412 459 aa3.58□□□□□ -1.84
CFTR-201ENST00000003084 FGFRL1Q8N441 504 aa3.58□□□□□ -1.84
CFTR-201ENST00000003084 MRPL30Q8TCC3 161 aaKnown RBP3.58□□□□□ -1.84
CFTR-201ENST00000003084 GPR146Q96CH1 333 aa3.58□□□□□ -1.84
CFTR-201ENST00000003084 NPFFR1Q9GZQ6 430 aa3.58□□□□□ -1.84
CFTR-201ENST00000003084 A0A1W2PPQ1 181 aa3.58□□□□□ -1.84
CFTR-201ENST00000003084 BUB3O43684 328 aa3.58□□□□□ -1.84
CFTR-201ENST00000003084 HLA-DQB1P01920 261 aa3.58□□□□□ -1.84
CFTR-201ENST00000003084 OR10J1P30954 320 aa3.58□□□□□ -1.84
CFTR-201ENST00000003084 SMCPP49901 116 aaPredicted RBP3.58□□□□□ -1.84
CFTR-201ENST00000003084 FGF8P55075 233 aaPredicted RBP3.58□□□□□ -1.84
CFTR-201ENST00000003084 SNRPD3P62318 126 aaKnown RBP3.58□□□□□ -1.84
CFTR-201ENST00000003084 SLC16A13Q7RTY0 426 aa3.58□□□□□ -1.84
CFTR-201ENST00000003084 GGNQ86UU5 652 aa3.58□□□□□ -1.84
CFTR-201ENST00000003084 ZNF738Q8NE65 137 aa3.58□□□□□ -1.84
CFTR-201ENST00000003084 OR10G8Q8NGN5 311 aa3.58□□□□□ -1.84
CFTR-201ENST00000003084 MRPL37Q9BZE1 423 aaKnown RBP3.58□□□□□ -1.84
CFTR-201ENST00000003084 PRSS22Q9GZN4 317 aa3.58□□□□□ -1.84
CFTR-201ENST00000003084 PRR13Q9NZ81 148 aa3.58□□□□□ -1.84
CFTR-201ENST00000003084 NUMA1Q14980 2115 aa3.58□□□□□ -1.84
CFTR-201ENST00000003084 IGHV3-72A0A0B4J1Y9 119 aa3.58□□□□□ -1.84
CFTR-201ENST00000003084 MEOX2P50222 304 aa3.58□□□□□ -1.84
CFTR-201ENST00000003084 NHLH1Q02575 133 aa3.58□□□□□ -1.84
CFTR-201ENST00000003084 TMEM187Q14656 261 aa3.58□□□□□ -1.84
CFTR-201ENST00000003084 PPP1R27Q86WC6 154 aa3.58□□□□□ -1.84
CFTR-201ENST00000003084 TMEM190Q8WZ59 177 aa3.58□□□□□ -1.84
CFTR-201ENST00000003084 GPR82Q96P67 336 aa3.58□□□□□ -1.84
CFTR-201ENST00000003084 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP3.58□□□□□ -1.84
CFTR-201ENST00000003084 MARCH11A6NNE9 402 aa3.58□□□□□ -1.84
CFTR-201ENST00000003084 MFNGO00587 321 aa3.58□□□□□ -1.84
CFTR-201ENST00000003084 PIN1P1O15428 100 aa3.58□□□□□ -1.84
CFTR-201ENST00000003084 AVPP01185 164 aa3.58□□□□□ -1.84
CFTR-201ENST00000003084 AREGP15514 252 aa3.58□□□□□ -1.84
CFTR-201ENST00000003084 RPL7P18124 248 aaKnown RBP3.58□□□□□ -1.84
CFTR-201ENST00000003084 NPPCP23582 126 aa3.58□□□□□ -1.84
CFTR-201ENST00000003084 GAS1P54826 345 aa3.58□□□□□ -1.84
CFTR-201ENST00000003084 TNFRSF9Q07011 255 aa3.58□□□□□ -1.84
CFTR-201ENST00000003084 KLHDC1Q8N7A1 406 aa3.58□□□□□ -1.84
CFTR-201ENST00000003084 PRSS33Q8NF86 280 aa3.58□□□□□ -1.84
CFTR-201ENST00000003084 SSC4DQ8WTU2 575 aa3.58□□□□□ -1.84
CFTR-201ENST00000003084 GTF3AQ92664 365 aaKnown RBP3.58□□□□□ -1.84
CFTR-201ENST00000003084 PPP1R3EQ9H7J1 279 aa3.58□□□□□ -1.84
CFTR-201ENST00000003084 POLR3KQ9Y2Y1 108 aaPredicted RBP3.58□□□□□ -1.84
CFTR-201ENST00000003084 UFC1Q9Y3C8 167 aa3.58□□□□□ -1.84
CFTR-201ENST00000003084 FRMPD3Q5JV73 1810 aa3.58□□□□□ -1.84
CFTR-201ENST00000003084 TMEM189A5PLL7 270 aa3.58□□□□□ -1.84
CFTR-201ENST00000003084 NDUFS8O00217 210 aa3.58□□□□□ -1.84
CFTR-201ENST00000003084 ISLRO14498 428 aa3.58□□□□□ -1.84
CFTR-201ENST00000003084 YPEL1O60688 119 aa3.58□□□□□ -1.84
CFTR-201ENST00000003084 NPIPB7O75200 414 aa3.58□□□□□ -1.84
CFTR-201ENST00000003084 FAM157CP0CG43 387 aa3.58□□□□□ -1.84
CFTR-201ENST00000003084 IGFBP3P17936 291 aaPredicted RBP3.58□□□□□ -1.84
CFTR-201ENST00000003084 NPBWR2P48146 333 aa3.58□□□□□ -1.84
CFTR-201ENST00000003084 CMC4P56277 68 aaPredicted RBP3.58□□□□□ -1.84
CFTR-201ENST00000003084 ERVS71-1P61550 626 aa3.58□□□□□ -1.84
CFTR-201ENST00000003084 HERVK_113P61574 105 aa3.58□□□□□ -1.84
CFTR-201ENST00000003084 RPS11P62280 158 aaKnown RBP eCLIP3.58□□□□□ -1.84
CFTR-201ENST00000003084 ZNF79Q15937 498 aa3.58□□□□□ -1.84
CFTR-201ENST00000003084 PIP4P1Q86T03 277 aa3.58□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms