RNA–Protein interactions for RNA: YMR038C

CCS1, Transcript of Copper chaperone for superoxide dismutase Sod1p, yeastyeast

Gene CCS1, Length 750 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CCS1YMR038C YMR321CQ04898 105 aa5.4□□□□□ -1.54
CCS1YMR038C WHI4Q07655 649 aaKnown RBP5.4□□□□□ -1.54
CCS1YMR038C YLR125WQ12138 136 aa5.4□□□□□ -1.54
CCS1YMR038C MPH2P0CD99 609 aa5.39□□□□□ -1.55
CCS1YMR038C RIT1P23796 513 aa5.39□□□□□ -1.55
CCS1YMR038C URA1P28272 314 aaPredicted RBP5.39□□□□□ -1.55
CCS1YMR038C RPD3P32561 433 aa5.39□□□□□ -1.55
CCS1YMR038C DBP7P36120 742 aaKnown RBP5.39□□□□□ -1.55
CCS1YMR038C CTR1P49573 406 aa5.39□□□□□ -1.55
CCS1YMR038C HSV2P50079 448 aaPredicted RBP5.39□□□□□ -1.55
CCS1YMR038C PSP2P50109 593 aaKnown RBP5.39□□□□□ -1.55
CCS1YMR038C MET13P53128 600 aa5.39□□□□□ -1.55
CCS1YMR038C FOL1P53848 824 aa5.39□□□□□ -1.55
CCS1YMR038C SSL1Q04673 461 aaPredicted RBP5.39□□□□□ -1.55
CCS1YMR038C SPH1Q06160 661 aa5.39□□□□□ -1.55
CCS1YMR038C HIS5P07172 385 aa5.38□□□□□ -1.55
CCS1YMR038C RFA1P22336 621 aaKnown RBP5.38□□□□□ -1.55
CCS1YMR038C FUB1P25659 250 aa5.38□□□□□ -1.55
CCS1YMR038C UBP5P39944 805 aa5.38□□□□□ -1.55
CCS1YMR038C URM1P40554 99 aaPredicted RBP5.38□□□□□ -1.55
CCS1YMR038C IRC24P40580 263 aa5.38□□□□□ -1.55
CCS1YMR038C CHA4P43634 648 aa5.38□□□□□ -1.55
CCS1YMR038C TY4A-JP47023 414 aa5.38□□□□□ -1.55
CCS1YMR038C ALG12P53730 551 aa5.38□□□□□ -1.55
CCS1YMR038C VPS30Q02948 557 aa5.38□□□□□ -1.55
CCS1YMR038C ATG11Q12527 1178 aa5.38□□□□□ -1.55
CCS1YMR038C NUC1P08466 329 aa5.37□□□□□ -1.55
CCS1YMR038C CUP1-1P0CX80 61 aa5.37□□□□□ -1.55
CCS1YMR038C CUP1-2P0CX81 61 aa5.37□□□□□ -1.55
CCS1YMR038C POL3P15436 1097 aa5.37□□□□□ -1.55
CCS1YMR038C PPZ1P26570 692 aa5.37□□□□□ -1.55
CCS1YMR038C ANP1P32629 500 aa5.37□□□□□ -1.55
CCS1YMR038C SPC29P33419 253 aa5.37□□□□□ -1.55
CCS1YMR038C MYO3P36006 1272 aa5.37□□□□□ -1.55
CCS1YMR038C FLR1P38124 548 aa5.37□□□□□ -1.55
CCS1YMR038C OSH3P38713 996 aaKnown RBP5.37□□□□□ -1.55
CCS1YMR038C VPS45P38932 577 aa5.37□□□□□ -1.55
CCS1YMR038C TVP23P38962 199 aa5.37□□□□□ -1.55
CCS1YMR038C YNL034WP53963 612 aa5.37□□□□□ -1.55
CCS1YMR038C YNL018CP53976 612 aa5.37□□□□□ -1.55
CCS1YMR038C YKR011CQ02209 353 aa5.37□□□□□ -1.55
CCS1YMR038C YLR224WQ05947 369 aa5.37□□□□□ -1.55
CCS1YMR038C MMR1Q06324 491 aa5.37□□□□□ -1.55
CCS1YMR038C BRE1Q07457 700 aaKnown RBP5.37□□□□□ -1.55
CCS1YMR038C NOP12Q08208 459 aaKnown RBP5.37□□□□□ -1.55
CCS1YMR038C TY1B-AO13527 1196 aaKnown RBP5.36□□□□□ -1.55
CCS1YMR038C MSH2P25847 964 aa5.36□□□□□ -1.55
CCS1YMR038C THI4P32318 326 aa5.36□□□□□ -1.55
CCS1YMR038C PRS1P32895 427 aaKnown RBP5.36□□□□□ -1.55
CCS1YMR038C LST4P34239 828 aa5.36□□□□□ -1.55
CCS1YMR038C ATG19P35193 415 aa5.36□□□□□ -1.55
CCS1YMR038C RRP14P36080 434 aaKnown RBP5.36□□□□□ -1.55
CCS1YMR038C RFC1P38630 861 aaKnown RBP5.36□□□□□ -1.55
CCS1YMR038C FAF1P40546 346 aaPredicted RBP5.36□□□□□ -1.55
CCS1YMR038C CEP3P40969 608 aa5.36□□□□□ -1.55
CCS1YMR038C NIT3P49954 291 aa5.36□□□□□ -1.55
CCS1YMR038C UPC2Q12151 913 aa5.36□□□□□ -1.55
CCS1YMR038C DAL7P21826 554 aa5.35□□□□□ -1.55
CCS1YMR038C OPI1P21957 404 aa5.35□□□□□ -1.55
CCS1YMR038C MEF1P25039 761 aa5.35□□□□□ -1.55
CCS1YMR038C STE14P32584 239 aa5.35□□□□□ -1.55
CCS1YMR038C TYE7P33122 291 aaPredicted RBP5.35□□□□□ -1.55
CCS1YMR038C PLB1P39105 664 aa5.35□□□□□ -1.55
CCS1YMR038C PES4P39684 611 aa5.35□□□□□ -1.55
CCS1YMR038C CSM2P40465 213 aa5.35□□□□□ -1.55
CCS1YMR038C DAM1P53267 343 aa5.35□□□□□ -1.55
CCS1YMR038C ATP25Q03153 612 aa5.35□□□□□ -1.55
CCS1YMR038C ECM16Q04217 1267 aaKnown RBP5.35□□□□□ -1.55
CCS1YMR038C MDM12Q92328 271 aa5.35□□□□□ -1.55
CCS1YMR038C ACC1Q00955 2233 aaKnown RBP5.34□□□□□ -1.55
CCS1YMR038C PRC1P00729 532 aa5.34□□□□□ -1.55
CCS1YMR038C MET6P05694 767 aaKnown RBP5.34□□□□□ -1.55
CCS1YMR038C CDC16P09798 840 aa5.34□□□□□ -1.55
CCS1YMR038C SRP54P20424 541 aaKnown RBP5.34□□□□□ -1.55
CCS1YMR038C YCL002CP25565 263 aa5.34□□□□□ -1.55
CCS1YMR038C IMG2P25642 146 aaPredicted RBP5.34□□□□□ -1.55
CCS1YMR038C PPG1P32838 368 aa5.34□□□□□ -1.55
CCS1YMR038C YIL108WP40483 696 aaKnown RBP5.34□□□□□ -1.55
CCS1YMR038C RPS7BP48164 190 aaKnown RBP5.34□□□□□ -1.55
CCS1YMR038C FMS1P50264 508 aa5.34□□□□□ -1.55
CCS1YMR038C TAD1P53065 400 aa5.34□□□□□ -1.55
CCS1YMR038C LSB1P53281 241 aa5.34□□□□□ -1.55
CCS1YMR038C NOG2P53742 486 aaKnown RBP5.34□□□□□ -1.55
CCS1YMR038C RPT6Q01939 405 aaKnown RBP5.34□□□□□ -1.55
CCS1YMR038C LRS4Q04087 347 aaKnown RBP5.34□□□□□ -1.55
CCS1YMR038C TMA10Q06177 86 aa5.34□□□□□ -1.55
CCS1YMR038C GUD1Q07729 489 aa5.34□□□□□ -1.55
CCS1YMR038C IRC10Q08118 586 aa5.34□□□□□ -1.55
CCS1YMR038C KCS1Q12494 1050 aa5.34□□□□□ -1.55
CCS1YMR038C YLR358CO13565 187 aa5.33□□□□□ -1.56
CCS1YMR038C RPP2AP05319 106 aaKnown RBP5.33□□□□□ -1.56
CCS1YMR038C CYS3P31373 394 aaKnown RBP5.33□□□□□ -1.56
CCS1YMR038C KTR4P38131 464 aa5.33□□□□□ -1.56
CCS1YMR038C APN2P38207 520 aa5.33□□□□□ -1.56
CCS1YMR038C JSN1P47135 1091 aaKnown RBP RIP-Chip data5.33□□□□□ -1.56not detected
CCS1YMR038C CLU1Q03690 1277 aaKnown RBP5.33□□□□□ -1.56
CCS1YMR038C CCH1P50077 2039 aa5.33□□□□□ -1.56
CCS1YMR038C RPS9AO13516 197 aaKnown RBP5.32□□□□□ -1.56
CCS1YMR038C BET2P20133 325 aa5.32□□□□□ -1.56
CCS1YMR038C DID4P36108 232 aa5.32□□□□□ -1.56
Retrieved 100 of 5,963 RNA–protein pairs in 9.5 ms