RNA–Protein interactions for RNA: YKR001C

VPS1, Transcript of Dynamin-like GTPase required for vacuolar sorting, yeastyeast

Gene VPS1, Length 2,115 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS1YKR001C CCZ1P38273 704 aa5.67□□□□□ -1.5
VPS1YKR001C POP7P38291 140 aa5.67□□□□□ -1.5
VPS1YKR001C MSG5P38590 489 aa5.67□□□□□ -1.5
VPS1YKR001C JHD1P40034 492 aa5.67□□□□□ -1.5
VPS1YKR001C VPS53P47061 822 aa5.67□□□□□ -1.5
VPS1YKR001C ATG17Q06410 417 aa5.67□□□□□ -1.5
VPS1YKR001C PDE2P06776 526 aa5.66□□□□□ -1.5
VPS1YKR001C YUR1P26725 428 aa5.66□□□□□ -1.5
VPS1YKR001C DOA4P32571 926 aa5.66□□□□□ -1.5
VPS1YKR001C YME1P32795 747 aa5.66□□□□□ -1.5
VPS1YKR001C TIM23P32897 222 aa5.66□□□□□ -1.5
VPS1YKR001C PTC3P34221 468 aaKnown RBP5.66□□□□□ -1.5
VPS1YKR001C GPT2P36148 743 aa5.66□□□□□ -1.5
VPS1YKR001C PBP2P38151 413 aaKnown RBP RIP-Chip data5.66□□□□□ -1.5not detected
VPS1YKR001C YHI9P38765 294 aa5.66□□□□□ -1.5
VPS1YKR001C QDR2P40474 542 aa5.66□□□□□ -1.5
VPS1YKR001C SPO22P40511 975 aa5.66□□□□□ -1.5
VPS1YKR001C IRC8P47046 822 aa5.66□□□□□ -1.5
VPS1YKR001C ISM1P48526 1002 aa5.66□□□□□ -1.5
VPS1YKR001C YNL108CP53929 270 aa5.66□□□□□ -1.5
VPS1YKR001C DAK1P54838 584 aaKnown RBP5.66□□□□□ -1.5
VPS1YKR001C EGD1Q02642 157 aaKnown RBP5.66□□□□□ -1.5
VPS1YKR001C VPS16Q03308 798 aa5.66□□□□□ -1.5
VPS1YKR001C GMC2Q06201 188 aa5.66□□□□□ -1.5
VPS1YKR001C TLG2Q08144 397 aa5.66□□□□□ -1.5
VPS1YKR001C LAM4P38800 1345 aa5.66□□□□□ -1.5
VPS1YKR001C REP1P03871 373 aa5.66□□□□□ -1.5
VPS1YKR001C FUR4P05316 633 aaKnown RBP5.66□□□□□ -1.5
VPS1YKR001C POX1P13711 748 aa5.66□□□□□ -1.5
VPS1YKR001C YJU2P28320 278 aaPredicted RBP5.66□□□□□ -1.5
VPS1YKR001C GUT1P32190 709 aa5.66□□□□□ -1.5
VPS1YKR001C RPT1P33299 467 aaKnown RBP5.66□□□□□ -1.5
VPS1YKR001C UBP11P36026 717 aa5.66□□□□□ -1.5
VPS1YKR001C KTR3P38130 404 aaPredicted RBP5.66□□□□□ -1.5
VPS1YKR001C KAP104P38217 918 aaKnown RBP5.66□□□□□ -1.5
VPS1YKR001C FZO1P38297 855 aa5.66□□□□□ -1.5
VPS1YKR001C DYS1P38791 387 aa5.66□□□□□ -1.5
VPS1YKR001C YNG2P38806 282 aaKnown RBP5.66□□□□□ -1.5
VPS1YKR001C UTP9P38882 575 aaKnown RBP5.66□□□□□ -1.5
VPS1YKR001C STB1P42845 420 aa5.66□□□□□ -1.5
VPS1YKR001C VPS70P47161 811 aa5.66□□□□□ -1.5
VPS1YKR001C RNR4P49723 345 aaKnown RBP5.66□□□□□ -1.5
VPS1YKR001C GOR1P53839 350 aa5.66□□□□□ -1.5
VPS1YKR001C YNL146WP53906 100 aa5.66□□□□□ -1.5
VPS1YKR001C SLD5Q03406 294 aa5.66□□□□□ -1.5
VPS1YKR001C SPC24Q04477 213 aa5.66□□□□□ -1.5
VPS1YKR001C ARP10Q04549 284 aa5.66□□□□□ -1.5
VPS1YKR001C YLR287CQ05881 355 aa5.66□□□□□ -1.5
VPS1YKR001C SEC10Q06245 871 aa5.66□□□□□ -1.5
VPS1YKR001C RSC58Q07979 502 aa5.66□□□□□ -1.5
VPS1YKR001C SOG2Q08817 791 aa5.66□□□□□ -1.5
VPS1YKR001C ATP16Q12165 160 aa5.66□□□□□ -1.5
VPS1YKR001C GPR1Q12361 961 aa5.66□□□□□ -1.5
VPS1YKR001C SRN2Q99176 213 aa5.66□□□□□ -1.5
VPS1YKR001C DAP2P18962 818 aa5.65□□□□□ -1.5
VPS1YKR001C DBF2P22204 572 aa5.65□□□□□ -1.5
VPS1YKR001C CLB3P24870 427 aa5.65□□□□□ -1.5
VPS1YKR001C CHS3P29465 1165 aa5.65□□□□□ -1.5
VPS1YKR001C SEG2P34250 1132 aa5.65□□□□□ -1.5
VPS1YKR001C CHK1P38147 527 aa5.65□□□□□ -1.5
VPS1YKR001C PHO88P38264 188 aaPredicted RBP5.65□□□□□ -1.5
VPS1YKR001C RRM3P38766 723 aa5.65□□□□□ -1.5
VPS1YKR001C YTA12P40341 825 aa5.65□□□□□ -1.5
VPS1YKR001C TMA108P40462 946 aa5.65□□□□□ -1.5
VPS1YKR001C LOC1P43586 204 aaPredicted RBP5.65□□□□□ -1.5
VPS1YKR001C MDE1P47095 244 aa5.65□□□□□ -1.5
VPS1YKR001C PML39Q03760 334 aa5.65□□□□□ -1.5
VPS1YKR001C SHE9Q04172 456 aa5.65□□□□□ -1.5
VPS1YKR001C DAP1Q12091 152 aa5.65□□□□□ -1.5
VPS1YKR001C MST1P07236 462 aa5.65□□□□□ -1.51
VPS1YKR001C SAM1P10659 382 aaKnown RBP5.65□□□□□ -1.51
VPS1YKR001C NMT1P14743 455 aa5.65□□□□□ -1.51
VPS1YKR001C MSS116P15424 664 aaKnown RBP5.65□□□□□ -1.51
VPS1YKR001C SAM2P19358 384 aaKnown RBP5.65□□□□□ -1.51
VPS1YKR001C DMC1P25453 334 aa5.65□□□□□ -1.51
VPS1YKR001C POT1P27796 417 aaKnown RBP RIP-Chip data5.65□□□□□ -1.51not detected
VPS1YKR001C RPC19P28000 142 aaKnown RBP5.65□□□□□ -1.51
VPS1YKR001C HIR1P32479 840 aa5.65□□□□□ -1.51
VPS1YKR001C SMI1P32566 505 aa5.65□□□□□ -1.51
VPS1YKR001C MGM101P32787 269 aaKnown RBP5.65□□□□□ -1.51
VPS1YKR001C TGL1P34163 548 aa5.65□□□□□ -1.51
VPS1YKR001C HEL1P36113 551 aa5.65□□□□□ -1.51
VPS1YKR001C PXL1P36166 706 aa5.65□□□□□ -1.51
VPS1YKR001C COS111P38308 924 aa5.65□□□□□ -1.51
VPS1YKR001C BIM1P40013 344 aa5.65□□□□□ -1.51
VPS1YKR001C YER186CP40101 306 aa5.65□□□□□ -1.51
VPS1YKR001C AIP1P46680 615 aaKnown RBP5.65□□□□□ -1.51
VPS1YKR001C SCS3P53012 380 aa5.65□□□□□ -1.51
VPS1YKR001C PEF1P53238 335 aa5.65□□□□□ -1.51
VPS1YKR001C CUS1Q02554 436 aaPredicted RBP5.65□□□□□ -1.51
VPS1YKR001C EMI2Q04409 500 aaKnown RBP5.65□□□□□ -1.51
VPS1YKR001C UTP14Q04500 899 aaKnown RBP5.65□□□□□ -1.51
VPS1YKR001C UFO1Q04511 668 aa5.65□□□□□ -1.51
VPS1YKR001C CSC1Q06538 782 aa5.65□□□□□ -1.51
VPS1YKR001C CET1O13297 549 aaPredicted RBP5.64□□□□□ -1.51
VPS1YKR001C MET6P05694 767 aaKnown RBP5.64□□□□□ -1.51
VPS1YKR001C OM45P16547 393 aa5.64□□□□□ -1.51
VPS1YKR001C TUP1P16649 713 aa5.64□□□□□ -1.51
VPS1YKR001C MCM4P30665 933 aaKnown RBP5.64□□□□□ -1.51
VPS1YKR001C DAL1P32375 460 aa5.64□□□□□ -1.51
Retrieved 100 of 5,963 RNA–protein pairs in 18.8 ms