RNA–Protein interactions for RNA: YKL020C

SPT23, Transcript of ER membrane protein involved in regulation of OLE1 transcription, yeast

Gene SPT23, Length 3,249 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SPT23	YKL020C	SET6	Q12529	373 aa		4.08	□□□□□ -1.76
SPT23	YKL020C	TY1B-NL2	Q99337	1749 aa	Known RBP	4.07	□□□□□ -1.76
SPT23	YKL020C	CDC8	P00572	216 aa		4.07	□□□□□ -1.76
SPT23	YKL020C	NCP1	P16603	691 aa	Known RBP	4.07	□□□□□ -1.76
SPT23	YKL020C	RDS2	P19541	446 aa	Known RBP	4.07	□□□□□ -1.76
SPT23	YKL020C	NPP1	P25353	742 aa		4.07	□□□□□ -1.76
SPT23	YKL020C	YCR016W	P25617	290 aa	Known RBP	4.07	□□□□□ -1.76
SPT23	YKL020C	MVD1	P32377	396 aa	Known RBP	4.07	□□□□□ -1.76
SPT23	YKL020C	FBP26	P32604	452 aa		4.07	□□□□□ -1.76
SPT23	YKL020C	NTH2	P35172	780 aa		4.07	□□□□□ -1.76
SPT23	YKL020C	AAP1	P37898	856 aa	Known RBP	4.07	□□□□□ -1.76
SPT23	YKL020C	SDH8	P38345	138 aa		4.07	□□□□□ -1.76
SPT23	YKL020C	RCY1	P39531	840 aa		4.07	□□□□□ -1.76
SPT23	YKL020C	NOP16	P40007	231 aa	Known RBP	4.07	□□□□□ -1.76
SPT23	YKL020C	TOK1	P40310	691 aa		4.07	□□□□□ -1.76
SPT23	YKL020C	LYS14	P40971	790 aa		4.07	□□□□□ -1.76
SPT23	YKL020C	YGR054W	P53235	642 aa	Known RBP	4.07	□□□□□ -1.76
SPT23	YKL020C	HER2	Q03557	464 aa		4.07	□□□□□ -1.76
SPT23	YKL020C	GMC2	Q06201	188 aa		4.07	□□□□□ -1.76
SPT23	YKL020C	PIG1	Q06216	648 aa		4.07	□□□□□ -1.76
SPT23	YKL020C	ESF1	Q06344	628 aa	Known RBP	4.07	□□□□□ -1.76
SPT23	YKL020C	YOR378W	Q08902	515 aa		4.07	□□□□□ -1.76
SPT23	YKL020C	MST1	P07236	462 aa		4.07	□□□□□ -1.76
SPT23	YKL020C	FBP1	P09201	348 aa		4.07	□□□□□ -1.76
SPT23	YKL020C	KAR2	P16474	682 aa	Known RBP	4.07	□□□□□ -1.76
SPT23	YKL020C	CLB3	P24870	427 aa		4.07	□□□□□ -1.76
SPT23	YKL020C	APL1	P27351	700 aa		4.07	□□□□□ -1.76
SPT23	YKL020C	KRE2	P27809	442 aa		4.07	□□□□□ -1.76
SPT23	YKL020C	GCD7	P32502	381 aa	Predicted RBP	4.07	□□□□□ -1.76
SPT23	YKL020C	MIF2	P35201	549 aa		4.07	□□□□□ -1.76
SPT23	YKL020C	UBP11	P36026	717 aa		4.07	□□□□□ -1.76
SPT23	YKL020C	YKR015C	P36111	568 aa		4.07	□□□□□ -1.76
SPT23	YKL020C	APM3	P38153	483 aa		4.07	□□□□□ -1.76
SPT23	YKL020C	YBR062C	P38239	180 aa		4.07	□□□□□ -1.76
SPT23	YKL020C	CCZ1	P38273	704 aa		4.07	□□□□□ -1.76
SPT23	YKL020C	YMR262W	P38430	313 aa		4.07	□□□□□ -1.76
SPT23	YKL020C	YTA12	P40341	825 aa		4.07	□□□□□ -1.76
SPT23	YKL020C	YJL049W	P47048	450 aa		4.07	□□□□□ -1.76
SPT23	YKL020C	ORC4	P54791	529 aa		4.07	□□□□□ -1.76
SPT23	YKL020C	SLT2	Q00772	484 aa		4.07	□□□□□ -1.76
SPT23	YKL020C	HPC2	Q01448	625 aa		4.07	□□□□□ -1.76
SPT23	YKL020C	RMI1	Q02685	241 aa		4.07	□□□□□ -1.76
SPT23	YKL020C	SRL4	Q03085	281 aa		4.07	□□□□□ -1.76
SPT23	YKL020C	PML39	Q03760	334 aa		4.07	□□□□□ -1.76
SPT23	YKL020C	FIN1	Q03898	291 aa		4.07	□□□□□ -1.76
SPT23	YKL020C	VPS64	Q03944	604 aa		4.07	□□□□□ -1.76
SPT23	YKL020C	CST9	Q06032	482 aa		4.07	□□□□□ -1.76
SPT23	YKL020C	SEC10	Q06245	871 aa		4.07	□□□□□ -1.76
SPT23	YKL020C	ADY3	Q07732	790 aa		4.07	□□□□□ -1.76
SPT23	YKL020C	TRP3	P00937	484 aa		4.06	□□□□□ -1.76
SPT23	YKL020C	PAB1	P04147	577 aa	Known RBP RIP-Chip data	4.06	□□□□□ -1.76	not detected
SPT23	YKL020C	CTT1	P06115	562 aa		4.06	□□□□□ -1.76
SPT23	YKL020C	SUP45	P12385	437 aa	Known RBP	4.06	□□□□□ -1.76
SPT23	YKL020C	KIN2	P13186	1147 aa	Known RBP	4.06	□□□□□ -1.76
SPT23	YKL020C	GCN3	P14741	305 aa		4.06	□□□□□ -1.76
SPT23	YKL020C	URA4	P20051	364 aa		4.06	□□□□□ -1.76
SPT23	YKL020C	GFD2	P25370	566 aa	Known RBP	4.06	□□□□□ -1.76
SPT23	YKL020C	PMT1	P33775	817 aa		4.06	□□□□□ -1.76
SPT23	YKL020C	TDA3	P38758	523 aa		4.06	□□□□□ -1.76
SPT23	YKL020C	UTP9	P38882	575 aa	Known RBP	4.06	□□□□□ -1.76
SPT23	YKL020C	PSY2	P40164	858 aa		4.06	□□□□□ -1.76
SPT23	YKL020C	YIL166C	P40445	542 aa		4.06	□□□□□ -1.76
SPT23	YKL020C	MNN11	P46985	422 aa	Known RBP	4.06	□□□□□ -1.76
SPT23	YKL020C	RFX1	P48743	811 aa		4.06	□□□□□ -1.76
SPT23	YKL020C	MCM6	P53091	1017 aa	Known RBP	4.06	□□□□□ -1.76
SPT23	YKL020C	FOL1	P53848	824 aa		4.06	□□□□□ -1.76
SPT23	YKL020C	RSC4	Q02206	625 aa		4.06	□□□□□ -1.76
SPT23	YKL020C	NGL3	Q03210	505 aa		4.06	□□□□□ -1.76
SPT23	YKL020C	JIP4	Q03361	876 aa		4.06	□□□□□ -1.76
SPT23	YKL020C	YML082W	Q04533	649 aa	Known RBP	4.06	□□□□□ -1.76
SPT23	YKL020C	RTN1	Q04947	295 aa	Known RBP	4.06	□□□□□ -1.76
SPT23	YKL020C	COA4	Q05809	96 aa		4.06	□□□□□ -1.76
SPT23	YKL020C	DXO1	Q06349	442 aa		4.06	□□□□□ -1.76
SPT23	YKL020C	AHC1	Q12433	566 aa		4.06	□□□□□ -1.76
SPT23	YKL020C	CET1	O13297	549 aa	Predicted RBP	4.06	□□□□□ -1.76
SPT23	YKL020C	RAD4	P14736	754 aa		4.06	□□□□□ -1.76
SPT23	YKL020C	YCR051W	P25631	222 aa		4.06	□□□□□ -1.76
SPT23	YKL020C	SQT1	P35184	431 aa		4.06	□□□□□ -1.76
SPT23	YKL020C	LSM12	P38828	187 aa	Known RBP	4.06	□□□□□ -1.76
SPT23	YKL020C	PCF11	P39081	626 aa	Predicted RBP	4.06	□□□□□ -1.76
SPT23	YKL020C	JEM1	P40358	645 aa		4.06	□□□□□ -1.76
SPT23	YKL020C	ROG3	P43602	733 aa		4.06	□□□□□ -1.76
SPT23	YKL020C	MAD3	P47074	515 aa		4.06	□□□□□ -1.76
SPT23	YKL020C	RPL34A	P87262	121 aa	Predicted RBP	4.06	□□□□□ -1.76
SPT23	YKL020C	RBS1	Q05672	457 aa	Known RBP	4.06	□□□□□ -1.76
SPT23	YKL020C	ATP4	P05626	244 aa		4.06	□□□□□ -1.76
SPT23	YKL020C	STE12	P13574	688 aa		4.06	□□□□□ -1.76
SPT23	YKL020C	MSB1	P21339	1137 aa	Known RBP	4.06	□□□□□ -1.76
SPT23	YKL020C	OAF3	P36023	863 aa		4.06	□□□□□ -1.76
SPT23	YKL020C	COS111	P38308	924 aa		4.06	□□□□□ -1.76
SPT23	YKL020C	THO1	P40040	218 aa	Known RBP	4.06	□□□□□ -1.76
SPT23	YKL020C	SIP5	P40210	489 aa	Known RBP	4.06	□□□□□ -1.76
SPT23	YKL020C	PKP1	P40530	394 aa		4.06	□□□□□ -1.76
SPT23	YKL020C	YNR063W	P53749	607 aa		4.06	□□□□□ -1.76
SPT23	YKL020C	ERG5	P54781	538 aa		4.06	□□□□□ -1.76
SPT23	YKL020C	HFD1	Q04458	532 aa		4.06	□□□□□ -1.76
SPT23	YKL020C	PHO92	Q06390	306 aa		4.06	□□□□□ -1.76
SPT23	YKL020C	UIP4	Q08926	304 aa		4.06	□□□□□ -1.76
SPT23	YKL020C	RIM20	Q12033	661 aa		4.06	□□□□□ -1.76
SPT23	YKL020C	SEY1	Q99287	776 aa		4.06	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 61 ms