RNA–Protein interactions for RNA: YHR120W

MSH1, Transcript of DNA-binding protein of the mitochondria, yeastyeast

Gene MSH1, Length 2,880 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSH1YHR120W SLD2P34252 453 aa5.3□□□□□ -1.56
MSH1YHR120W TRZ1P36159 838 aaPredicted RBP5.3□□□□□ -1.56
MSH1YHR120W MMS21P38632 267 aa5.3□□□□□ -1.56
MSH1YHR120W PSP1P50896 841 aaKnown RBP5.3□□□□□ -1.56
MSH1YHR120W TAD1P53065 400 aa5.3□□□□□ -1.56
MSH1YHR120W MND1P53102 219 aa5.3□□□□□ -1.56
MSH1YHR120W UTP8P53276 713 aaKnown RBP5.3□□□□□ -1.56
MSH1YHR120W YNL035CP53962 389 aaKnown RBP5.3□□□□□ -1.56
MSH1YHR120W RPL22BP56628 122 aaKnown RBP5.3□□□□□ -1.56
MSH1YHR120W CEG1Q01159 459 aaPredicted RBP5.3□□□□□ -1.56
MSH1YHR120W IRC10Q08118 586 aa5.3□□□□□ -1.56
MSH1YHR120W TRE1Q08919 783 aa5.3□□□□□ -1.56
MSH1YHR120W ERG11P10614 530 aa5.3□□□□□ -1.56
MSH1YHR120W PYC1P11154 1178 aaKnown RBP5.3□□□□□ -1.56
MSH1YHR120W GFA1P14742 717 aaKnown RBP5.3□□□□□ -1.56
MSH1YHR120W PUP3P25451 205 aaKnown RBP5.3□□□□□ -1.56
MSH1YHR120W LRE1P25579 583 aaKnown RBP5.3□□□□□ -1.56
MSH1YHR120W ISF1P32488 338 aa5.3□□□□□ -1.56
MSH1YHR120W YMC2P38087 329 aa5.3□□□□□ -1.56
MSH1YHR120W DUG2P38149 878 aa5.3□□□□□ -1.56
MSH1YHR120W ASG7P46993 209 aa5.3□□□□□ -1.56
MSH1YHR120W URH1Q04179 340 aa5.3□□□□□ -1.56
MSH1YHR120W YMR114CQ04471 368 aaKnown RBP5.3□□□□□ -1.56
MSH1YHR120W SAM3Q08986 587 aa5.3□□□□□ -1.56
MSH1YHR120W YPQ1Q12010 308 aa5.3□□□□□ -1.56
MSH1YHR120W CDC33P07260 213 aaKnown RBP5.29□□□□□ -1.56
MSH1YHR120W PRP16P15938 1071 aaPredicted RBP5.29□□□□□ -1.56
MSH1YHR120W SMC1P32908 1225 aa5.29□□□□□ -1.56
MSH1YHR120W TSA1P34760 196 aaKnown RBP5.29□□□□□ -1.56
MSH1YHR120W DSF2P38213 736 aa5.29□□□□□ -1.56
MSH1YHR120W OLA1P38219 394 aaKnown RBP5.29□□□□□ -1.56
MSH1YHR120W FHL1P39521 936 aa5.29□□□□□ -1.56
MSH1YHR120W PHO86P46956 311 aa5.29□□□□□ -1.56
MSH1YHR120W KAP114P53067 1004 aa5.29□□□□□ -1.56
MSH1YHR120W GPD1Q00055 391 aaKnown RBP5.29□□□□□ -1.56
MSH1YHR120W NBP2Q12163 236 aa5.29□□□□□ -1.56
MSH1YHR120W RPS3P05750 240 aaKnown RBP5.29□□□□□ -1.56
MSH1YHR120W YER152CP10356 443 aa5.29□□□□□ -1.56
MSH1YHR120W YMR124WP39523 943 aaKnown RBP5.29□□□□□ -1.56
MSH1YHR120W BTT1P40314 149 aaPredicted RBP5.29□□□□□ -1.56
MSH1YHR120W GUF1P46943 645 aa5.29□□□□□ -1.56
MSH1YHR120W ECM22Q05958 814 aaPredicted RBP5.29□□□□□ -1.56
MSH1YHR120W BSP1Q06604 576 aa5.29□□□□□ -1.56
MSH1YHR120W DDC1Q08949 612 aa5.29□□□□□ -1.56
MSH1YHR120W VPS54Q12071 889 aa5.29□□□□□ -1.56
MSH1YHR120W NDJ1Q12366 352 aa5.29□□□□□ -1.56
MSH1YHR120W DSS4P32601 143 aa5.28□□□□□ -1.56
MSH1YHR120W UBC6P33296 250 aaPredicted RBP5.28□□□□□ -1.56
MSH1YHR120W SAP1P39955 897 aaKnown RBP5.28□□□□□ -1.56
MSH1YHR120W YEL075CP39972 122 aa5.28□□□□□ -1.56
MSH1YHR120W PUS2P53167 370 aa5.28□□□□□ -1.56
MSH1YHR120W GCN5Q03330 439 aa5.28□□□□□ -1.56
MSH1YHR120W RCL1Q08096 367 aaPredicted RBP5.28□□□□□ -1.56
MSH1YHR120W APL5Q08951 932 aaKnown RBP5.28□□□□□ -1.56
MSH1YHR120W MTF1P14908 341 aaKnown RBP5.28□□□□□ -1.56
MSH1YHR120W YCR051WP25631 222 aa5.28□□□□□ -1.56
MSH1YHR120W AVT2P39981 480 aa5.28□□□□□ -1.56
MSH1YHR120W RPT2P40327 437 aaKnown RBP5.28□□□□□ -1.56
MSH1YHR120W YTA12P40341 825 aa5.28□□□□□ -1.56
MSH1YHR120W MMM1P41800 426 aa5.28□□□□□ -1.56
MSH1YHR120W ARO80Q04052 950 aa5.28□□□□□ -1.56
MSH1YHR120W MDM38Q08179 573 aa5.28□□□□□ -1.56
MSH1YHR120W TRP2P00899 507 aaKnown RBP5.27□□□□□ -1.57
MSH1YHR120W PMR1P13586 950 aa5.27□□□□□ -1.57
MSH1YHR120W MRP4P32902 394 aa5.27□□□□□ -1.57
MSH1YHR120W ABZ1P37254 787 aaPredicted RBP5.27□□□□□ -1.57
MSH1YHR120W YBL036CP38197 257 aa5.27□□□□□ -1.57
MSH1YHR120W YBR225WP38321 900 aa5.27□□□□□ -1.57
MSH1YHR120W MRX1P40050 688 aa5.27□□□□□ -1.57
MSH1YHR120W CDC1P40986 491 aa5.27□□□□□ -1.57
MSH1YHR120W PFD1P46988 109 aa5.27□□□□□ -1.57
MSH1YHR120W ART5P53244 586 aaKnown RBP5.27□□□□□ -1.57
MSH1YHR120W YPL062WQ02781 134 aa5.27□□□□□ -1.57
MSH1YHR120W DIS3Q08162 1001 aaKnown RBP5.27□□□□□ -1.57
MSH1YHR120W JIP3O13555 125 aa5.27□□□□□ -1.57
MSH1YHR120W PPH22P23595 377 aa5.27□□□□□ -1.57
MSH1YHR120W DAL1P32375 460 aa5.27□□□□□ -1.57
MSH1YHR120W NIP1P32497 812 aaKnown RBP5.27□□□□□ -1.57
MSH1YHR120W POL12P38121 705 aaPredicted RBP5.27□□□□□ -1.57
MSH1YHR120W EXO5P38289 585 aa5.27□□□□□ -1.57
MSH1YHR120W NUP60P39705 539 aa5.27□□□□□ -1.57
MSH1YHR120W YNL320WP42840 284 aa5.27□□□□□ -1.57
MSH1YHR120W MTD1Q02046 320 aaKnown RBP5.27□□□□□ -1.57
MSH1YHR120W YMR018WQ04364 514 aa5.27□□□□□ -1.57
MSH1YHR120W HRD3Q05787 833 aa5.27□□□□□ -1.57
MSH1YHR120W ADH4P10127 382 aa5.26□□□□□ -1.57
MSH1YHR120W SGF29P25554 259 aa5.26□□□□□ -1.57
MSH1YHR120W LOS1P33418 1100 aaPredicted RBP5.26□□□□□ -1.57
MSH1YHR120W CBR1P38626 284 aaKnown RBP5.26□□□□□ -1.57
MSH1YHR120W RPC17P47076 161 aa5.26□□□□□ -1.57
MSH1YHR120W DIG1Q03063 452 aaKnown RBP5.26□□□□□ -1.57
MSH1YHR120W YHM2Q04013 314 aa5.26□□□□□ -1.57
MSH1YHR120W TMN2Q04562 672 aa5.26□□□□□ -1.57
MSH1YHR120W YDR338CQ05497 695 aa5.26□□□□□ -1.57
MSH1YHR120W PDH1Q12428 516 aaKnown RBP5.26□□□□□ -1.57
MSH1YHR120W ARG4P04076 463 aaPredicted RBP5.26□□□□□ -1.57
MSH1YHR120W HIS5P07172 385 aa5.26□□□□□ -1.57
MSH1YHR120W PRP9P19736 530 aaKnown RBP5.26□□□□□ -1.57
MSH1YHR120W SIR1P21691 654 aa5.26□□□□□ -1.57
MSH1YHR120W YME1P32795 747 aa5.26□□□□□ -1.57
Retrieved 100 of 5,963 RNA–protein pairs in 79.2 ms