RNA–Protein interactions for RNA: YGR074W

SMD1, Transcript of Core Sm protein Sm D1, yeastyeast

Gene SMD1, Length 441 nt, Biotype protein coding.

RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SMD1YGR074W TGL1P34163 548 aa2.56□□□□□ -2
SMD1YGR074W YHL041WP38730 149 aa2.56□□□□□ -2
SMD1YGR074W SSP120P39931 234 aaKnown RBP2.56□□□□□ -2
SMD1YGR074W YNL195CP40168 261 aa2.56□□□□□ -2
SMD1YGR074W ELO3P40319 345 aa2.56□□□□□ -2
SMD1YGR074W IES1P43579 692 aa2.56□□□□□ -2
SMD1YGR074W BIT61P47041 543 aa2.56□□□□□ -2
SMD1YGR074W MUP1P50276 574 aa2.56□□□□□ -2
SMD1YGR074W TEP1P53916 434 aa2.56□□□□□ -2
SMD1YGR074W MTD1Q02046 320 aaKnown RBP2.56□□□□□ -2
SMD1YGR074W MUK1Q02866 612 aa2.56□□□□□ -2
SMD1YGR074W HOF1Q05080 669 aa2.56□□□□□ -2
SMD1YGR074W YPS7Q06325 596 aa2.56□□□□□ -2
SMD1YGR074W HIM1Q06674 414 aa2.56□□□□□ -2
SMD1YGR074W AFT2Q08957 416 aa2.56□□□□□ -2
SMD1YGR074W YOL114CQ12322 202 aa2.56□□□□□ -2
SMD1YGR074W ARP7Q12406 477 aa2.56□□□□□ -2
SMD1YGR074W VPS5Q92331 675 aa2.56□□□□□ -2
SMD1YGR074W ECM3Q99252 613 aa2.56□□□□□ -2
SMD1YGR074W VAS1P07806 1104 aaKnown RBP2.55□□□□□ -2
SMD1YGR074W CDC26P14724 124 aa2.55□□□□□ -2
SMD1YGR074W CBP3P21560 335 aa2.55□□□□□ -2
SMD1YGR074W PEX1P24004 1043 aa2.55□□□□□ -2
SMD1YGR074W NTH1P32356 751 aa2.55□□□□□ -2
SMD1YGR074W PET309P32522 965 aaPredicted RBP2.55□□□□□ -2
SMD1YGR074W NUP60P39705 539 aa2.55□□□□□ -2
SMD1YGR074W EAF5P39995 279 aa2.55□□□□□ -2
SMD1YGR074W PIG2P40187 538 aa2.55□□□□□ -2
SMD1YGR074W BUD8P41698 603 aa2.55□□□□□ -2
SMD1YGR074W QRI7P43122 407 aa2.55□□□□□ -2
SMD1YGR074W IRC5P43610 853 aa2.55□□□□□ -2
SMD1YGR074W IML2P47031 731 aa2.55□□□□□ -2
SMD1YGR074W NOP9P47077 666 aaKnown RBP2.55□□□□□ -2
SMD1YGR074W SLU7Q02775 382 aaKnown RBP2.55□□□□□ -2
SMD1YGR074W VPS36Q06696 566 aa2.55□□□□□ -2
SMD1YGR074W STP4Q07351 490 aa2.55□□□□□ -2
SMD1YGR074W ABF1P14164 731 aa2.54□□□□□ -2
SMD1YGR074W GFA1P14742 717 aaKnown RBP2.54□□□□□ -2
SMD1YGR074W CWH43P25618 953 aa2.54□□□□□ -2
SMD1YGR074W MRPL36P36531 177 aa2.54□□□□□ -2
SMD1YGR074W COS111P38308 924 aa2.54□□□□□ -2
SMD1YGR074W YHL017WP38745 532 aa2.54□□□□□ -2
SMD1YGR074W ACA1P39970 489 aa2.54□□□□□ -2
SMD1YGR074W SCS2P40075 244 aaKnown RBP2.54□□□□□ -2
SMD1YGR074W SDS3P40505 327 aa2.54□□□□□ -2
SMD1YGR074W SAP185P40856 1058 aa2.54□□□□□ -2
SMD1YGR074W MTL1P53214 551 aa2.54□□□□□ -2
SMD1YGR074W MRPS35P53292 345 aa2.54□□□□□ -2
SMD1YGR074W BLS1Q06071 122 aa2.54□□□□□ -2
SMD1YGR074W BUD21Q08492 214 aaPredicted RBP2.54□□□□□ -2
SMD1YGR074W ZRT2Q12436 422 aa2.54□□□□□ -2
SMD1YGR074W SSM4P40318 1319 aa2.53□□□□□ -2
SMD1YGR074W CTT1P06115 562 aa2.53□□□□□ -2
SMD1YGR074W MIS1P09440 975 aaKnown RBP2.53□□□□□ -2
SMD1YGR074W PCK1P10963 549 aa2.53□□□□□ -2
SMD1YGR074W HMG2P12684 1045 aa2.53□□□□□ -2
SMD1YGR074W SEC18P18759 758 aaKnown RBP2.53□□□□□ -2
SMD1YGR074W IME1P21190 360 aa2.53□□□□□ -2
SMD1YGR074W PRP28P23394 588 aa2.53□□□□□ -2
SMD1YGR074W ERG6P25087 383 aaKnown RBP2.53□□□□□ -2
SMD1YGR074W PRE4P30657 266 aa2.53□□□□□ -2
SMD1YGR074W DBF20P32328 564 aa2.53□□□□□ -2
SMD1YGR074W SSH4P32343 579 aa2.53□□□□□ -2
SMD1YGR074W PPZ2P33329 710 aa2.53□□□□□ -2
SMD1YGR074W RRP8P38961 392 aaKnown RBP2.53□□□□□ -2
SMD1YGR074W YEL025CP39991 1188 aa2.53□□□□□ -2
SMD1YGR074W TAH11P47112 604 aa2.53□□□□□ -2
SMD1YGR074W PEF1P53238 335 aa2.53□□□□□ -2
SMD1YGR074W YAP1802P53309 568 aa2.53□□□□□ -2
SMD1YGR074W RCR2Q03446 210 aaKnown RBP2.53□□□□□ -2
SMD1YGR074W HMO1Q03973 246 aaKnown RBP2.53□□□□□ -2
SMD1YGR074W ARA2Q04212 335 aa2.53□□□□□ -2
SMD1YGR074W YMR018WQ04364 514 aa2.53□□□□□ -2
SMD1YGR074W TRI1Q05024 226 aa2.53□□□□□ -2
SMD1YGR074W COQ11Q05892 277 aa2.53□□□□□ -2
SMD1YGR074W YCG1Q06680 1035 aa2.53□□□□□ -2
SMD1YGR074W YAP7Q08182 245 aa2.53□□□□□ -2
SMD1YGR074W FRE5Q08908 694 aa2.53□□□□□ -2
SMD1YGR074W MRH1Q12117 320 aaPredicted RBP2.53□□□□□ -2
SMD1YGR074W YKL033W-AQ86ZR7 236 aa2.53□□□□□ -2
SMD1YGR074W HRP1Q99383 534 aaKnown RBP2.53□□□□□ -2
SMD1YGR074W PHO5P00635 467 aa2.52□□□□□ -2.01
SMD1YGR074W PIF1P07271 859 aa2.52□□□□□ -2.01
SMD1YGR074W MSS18P08593 268 aa2.52□□□□□ -2.01
SMD1YGR074W CDC43P18898 376 aa2.52□□□□□ -2.01
SMD1YGR074W MSM1P22438 575 aa2.52□□□□□ -2.01
SMD1YGR074W ILV6P25605 309 aaKnown RBP2.52□□□□□ -2.01
SMD1YGR074W FEN2P25621 512 aaKnown RBP2.52□□□□□ -2.01
SMD1YGR074W SWC3P31376 625 aa2.52□□□□□ -2.01
SMD1YGR074W BCS1P32839 456 aa2.52□□□□□ -2.01
SMD1YGR074W APM3P38153 483 aa2.52□□□□□ -2.01
SMD1YGR074W YLF2P38746 405 aa2.52□□□□□ -2.01
SMD1YGR074W SFB3P38810 929 aa2.52□□□□□ -2.01
SMD1YGR074W FMO1P38866 432 aa2.52□□□□□ -2.01
SMD1YGR074W SWD1P39706 426 aa2.52□□□□□ -2.01
SMD1YGR074W GET2P40056 285 aa2.52□□□□□ -2.01
SMD1YGR074W YIL077CP40508 320 aa2.52□□□□□ -2.01
SMD1YGR074W PRM2P40534 656 aa2.52□□□□□ -2.01
SMD1YGR074W BAP3P41815 604 aa2.52□□□□□ -2.01
SMD1YGR074W MNT2P53059 558 aa2.52□□□□□ -2.01
Retrieved 100 of 5,963 RNA–protein pairs in 62 ms