RNA–Protein interactions for RNA: YDR100W

TVP15, Transcript of Integral membrane protein, yeast

Gene TVP15, Length 432 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TVP15	YDR100W	USV1	Q12132	391 aa		4.12	□□□□□ -1.75
TVP15	YDR100W	ACF2	Q12168	779 aa		4.12	□□□□□ -1.75
TVP15	YDR100W	ATP4	P05626	244 aa		4.11	□□□□□ -1.75
TVP15	YDR100W	YEF3	P16521	1044 aa	Known RBP	4.11	□□□□□ -1.75
TVP15	YDR100W	TUP1	P16649	713 aa		4.11	□□□□□ -1.75
TVP15	YDR100W	THR1	P17423	357 aa	Known RBP	4.11	□□□□□ -1.75
TVP15	YDR100W	KCC4	P25389	1037 aa		4.11	□□□□□ -1.75
TVP15	YDR100W	MTC7	P32633	139 aa		4.11	□□□□□ -1.75
TVP15	YDR100W	TMN3	P40071	706 aa		4.11	□□□□□ -1.75
TVP15	YDR100W	ATG36	P46983	293 aa		4.11	□□□□□ -1.75
TVP15	YDR100W	MET14	Q02196	202 aa		4.11	□□□□□ -1.75
TVP15	YDR100W	NUR1	Q12066	484 aa		4.11	□□□□□ -1.75
TVP15	YDR100W	GAL1	P04385	528 aa		4.1	□□□□□ -1.75
TVP15	YDR100W	HMG2	P12684	1045 aa		4.1	□□□□□ -1.75
TVP15	YDR100W	NTH1	P32356	751 aa		4.1	□□□□□ -1.75
TVP15	YDR100W	MSS1	P32559	526 aa	Predicted RBP	4.1	□□□□□ -1.75
TVP15	YDR100W	KHA1	P40309	873 aa		4.1	□□□□□ -1.75
TVP15	YDR100W	TPM2	P40414	161 aa		4.1	□□□□□ -1.75
TVP15	YDR100W	TIM50	Q02776	476 aa		4.1	□□□□□ -1.75
TVP15	YDR100W	YCG1	Q06680	1035 aa		4.1	□□□□□ -1.75
TVP15	YDR100W	AIM41	Q12032	185 aa		4.1	□□□□□ -1.75
TVP15	YDR100W	RTK1	Q12100	620 aa	Predicted RBP	4.1	□□□□□ -1.75
TVP15	YDR100W	VPS5	Q92331	675 aa		4.1	□□□□□ -1.75
TVP15	YDR100W	PHO3	P24031	467 aa		4.09	□□□□□ -1.75
TVP15	YDR100W	FUB1	P25659	250 aa		4.09	□□□□□ -1.75
TVP15	YDR100W	YKL133C	P36066	463 aa		4.09	□□□□□ -1.75
TVP15	YDR100W	SET3	P36124	751 aa		4.09	□□□□□ -1.75
TVP15	YDR100W	CTP1	P38152	299 aa		4.09	□□□□□ -1.75
TVP15	YDR100W	MOH1	P38191	138 aa		4.09	□□□□□ -1.75
TVP15	YDR100W	EHT1	P38295	451 aa		4.09	□□□□□ -1.75
TVP15	YDR100W	YHR097C	P38809	366 aa	Known RBP	4.09	□□□□□ -1.75
TVP15	YDR100W	SAW1	P39735	261 aa		4.09	□□□□□ -1.75
TVP15	YDR100W	ASK10	P48361	1146 aa		4.09	□□□□□ -1.75
TVP15	YDR100W	PIP2	P52960	996 aa		4.09	□□□□□ -1.75
TVP15	YDR100W	PEF1	P53238	335 aa		4.09	□□□□□ -1.75
TVP15	YDR100W	MDR1	P53258	950 aa		4.09	□□□□□ -1.75
TVP15	YDR100W	YGR151C	P53287	111 aa		4.09	□□□□□ -1.75
TVP15	YDR100W	CNM67	P53865	581 aa	Known RBP	4.09	□□□□□ -1.75
TVP15	YDR100W	ATG4	P53867	494 aa		4.09	□□□□□ -1.75
TVP15	YDR100W	SMX3	P54999	86 aa	Predicted RBP	4.09	□□□□□ -1.75
TVP15	YDR100W	TIM44	Q01852	431 aa		4.09	□□□□□ -1.75
TVP15	YDR100W	FDC1	Q03034	503 aa		4.09	□□□□□ -1.75
TVP15	YDR100W	YDL086W	Q07505	273 aa		4.09	□□□□□ -1.75
TVP15	YDR100W	HBT1	Q07653	1046 aa	Known RBP	4.09	□□□□□ -1.75
TVP15	YDR100W	ABF1	P14164	731 aa		4.08	□□□□□ -1.76
TVP15	YDR100W	HOP1	P20050	605 aa		4.08	□□□□□ -1.76
TVP15	YDR100W	PTP2	P29461	750 aa		4.08	□□□□□ -1.76
TVP15	YDR100W	OAR1	P35731	278 aa		4.08	□□□□□ -1.76
TVP15	YDR100W	SCS2	P40075	244 aa	Known RBP	4.08	□□□□□ -1.76
TVP15	YDR100W	NDC80	P40460	691 aa		4.08	□□□□□ -1.76
TVP15	YDR100W	TAH11	P47112	604 aa		4.08	□□□□□ -1.76
TVP15	YDR100W	YDL183C	P48569	320 aa		4.08	□□□□□ -1.76
TVP15	YDR100W	CTR1	P49573	406 aa		4.08	□□□□□ -1.76
TVP15	YDR100W	MNT2	P53059	558 aa		4.08	□□□□□ -1.76
TVP15	YDR100W	CEG1	Q01159	459 aa	Predicted RBP	4.08	□□□□□ -1.76
TVP15	YDR100W	HLR1	Q04429	423 aa		4.08	□□□□□ -1.76
TVP15	YDR100W	MLC2	Q06580	163 aa		4.08	□□□□□ -1.76
TVP15	YDR100W	IZH3	Q07959	543 aa		4.08	□□□□□ -1.76
TVP15	YDR100W	MCH5	Q08777	521 aa		4.08	□□□□□ -1.76
TVP15	YDR100W	PSF3	Q12146	194 aa		4.08	□□□□□ -1.76
TVP15	YDR100W	CWH43	P25618	953 aa		4.07	□□□□□ -1.76
TVP15	YDR100W	TGL1	P34163	548 aa		4.07	□□□□□ -1.76
TVP15	YDR100W	SDS22	P36047	338 aa		4.07	□□□□□ -1.76
TVP15	YDR100W	ELF1	P36053	145 aa		4.07	□□□□□ -1.76
TVP15	YDR100W	KSP1	P38691	1029 aa	Known RBP	4.07	□□□□□ -1.76
TVP15	YDR100W	PPE1	P38796	400 aa		4.07	□□□□□ -1.76
TVP15	YDR100W	SSP120	P39931	234 aa	Known RBP	4.07	□□□□□ -1.76
TVP15	YDR100W	ARG2	P40360	574 aa		4.07	□□□□□ -1.76
TVP15	YDR100W	HIS6	P40545	261 aa		4.07	□□□□□ -1.76
TVP15	YDR100W	MAD2	P40958	196 aa		4.07	□□□□□ -1.76
TVP15	YDR100W	TAN1	P53072	289 aa	Predicted RBP	4.07	□□□□□ -1.76
TVP15	YDR100W	NMA2	P53204	395 aa		4.07	□□□□□ -1.76
TVP15	YDR100W	YGR054W	P53235	642 aa	Known RBP	4.07	□□□□□ -1.76
TVP15	YDR100W	YSH1	Q06224	779 aa	Predicted RBP	4.07	□□□□□ -1.76
TVP15	YDR100W	DIN7	Q12086	430 aa		4.07	□□□□□ -1.76
TVP15	YDR100W	HOS1	Q12214	470 aa		4.07	□□□□□ -1.76
TVP15	YDR100W	YOL114C	Q12322	202 aa		4.07	□□□□□ -1.76
TVP15	YDR100W	URA3	P03962	267 aa		4.06	□□□□□ -1.76
TVP15	YDR100W	CBP3	P21560	335 aa		4.06	□□□□□ -1.76
TVP15	YDR100W	PET309	P32522	965 aa	Predicted RBP	4.06	□□□□□ -1.76
TVP15	YDR100W	YEL025C	P39991	1188 aa		4.06	□□□□□ -1.76
TVP15	YDR100W	DIP5	P53388	608 aa		4.06	□□□□□ -1.76
TVP15	YDR100W	YNR071C	P53757	342 aa		4.06	□□□□□ -1.76
TVP15	YDR100W	DBP10	Q12389	995 aa	Known RBP	4.06	□□□□□ -1.76
TVP15	YDR100W	TUF1	P02992	437 aa	Known RBP	4.05	□□□□□ -1.76
TVP15	YDR100W	VAS1	P07806	1104 aa	Known RBP	4.05	□□□□□ -1.76
TVP15	YDR100W	ADH4	P10127	382 aa		4.05	□□□□□ -1.76
TVP15	YDR100W	PCK1	P10963	549 aa		4.05	□□□□□ -1.76
TVP15	YDR100W	ARG1	P22768	420 aa		4.05	□□□□□ -1.76
TVP15	YDR100W	GLG1	P36143	616 aa		4.05	□□□□□ -1.76
TVP15	YDR100W	APL3	P38065	1025 aa		4.05	□□□□□ -1.76
TVP15	YDR100W	UBS1	P38290	277 aa		4.05	□□□□□ -1.76
TVP15	YDR100W	RIM4	P38741	713 aa		4.05	□□□□□ -1.76
TVP15	YDR100W	SDS3	P40505	327 aa		4.05	□□□□□ -1.76
TVP15	YDR100W	GND2	P53319	492 aa		4.05	□□□□□ -1.76
TVP15	YDR100W	TMN2	Q04562	672 aa		4.05	□□□□□ -1.76
TVP15	YDR100W	RRP6	Q12149	733 aa	Known RBP	4.05	□□□□□ -1.76
TVP15	YDR100W	LAM4	P38800	1345 aa		4.04	□□□□□ -1.76
TVP15	YDR100W	SEC12	P11655	471 aa		4.04	□□□□□ -1.76
TVP15	YDR100W	GMH1	P36125	273 aa		4.04	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 28.1 ms