RNA–Protein interactions for RNA: YBR109C

CMD1, Transcript of Calmodulin, yeast

Gene CMD1, Length 444 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CMD1	YBR109C	HAP1	P0CE41	1502 aa		3.91	□□□□□ -1.78
CMD1	YBR109C	RPS17A	P02407	136 aa	Known RBP	3.91	□□□□□ -1.78
CMD1	YBR109C	TRP4	P07285	380 aa	Predicted RBP	3.91	□□□□□ -1.78
CMD1	YBR109C	GLN4	P13188	809 aa	Known RBP	3.91	□□□□□ -1.78
CMD1	YBR109C	RPS17B	P14127	136 aa	Known RBP	3.91	□□□□□ -1.78
CMD1	YBR109C	PFK1	P16861	987 aa	Known RBP	3.91	□□□□□ -1.78
CMD1	YBR109C	COX11	P19516	300 aa	Known RBP	3.91	□□□□□ -1.78
CMD1	YBR109C	RTR1	P40084	226 aa	Predicted RBP	3.91	□□□□□ -1.78
CMD1	YBR109C	PDR11	P40550	1411 aa		3.91	□□□□□ -1.78
CMD1	YBR109C	PHO23	P50947	330 aa		3.91	□□□□□ -1.78
CMD1	YBR109C	REC102	Q02721	264 aa		3.91	□□□□□ -1.78
CMD1	YBR109C	YMR210W	Q03649	449 aa		3.91	□□□□□ -1.78
CMD1	YBR109C	GAD1	Q04792	585 aa		3.91	□□□□□ -1.78
CMD1	YBR109C	YPS7	Q06325	596 aa		3.91	□□□□□ -1.78
CMD1	YBR109C	ISA1	Q07821	250 aa	Predicted RBP	3.91	□□□□□ -1.78
CMD1	YBR109C	SNF2	P22082	1703 aa		3.9	□□□□□ -1.78
CMD1	YBR109C	PMA1	P05030	918 aa	Known RBP	3.9	□□□□□ -1.79
CMD1	YBR109C	KAR1	P11927	433 aa		3.9	□□□□□ -1.79
CMD1	YBR109C	CDC26	P14724	124 aa		3.9	□□□□□ -1.79
CMD1	YBR109C	ATP12	P22135	325 aa		3.9	□□□□□ -1.79
CMD1	YBR109C	ERG6	P25087	383 aa	Known RBP	3.9	□□□□□ -1.79
CMD1	YBR109C	OAR1	P35731	278 aa		3.9	□□□□□ -1.79
CMD1	YBR109C	TRZ1	P36159	838 aa	Predicted RBP	3.9	□□□□□ -1.79
CMD1	YBR109C	APT2	P36973	181 aa		3.9	□□□□□ -1.79
CMD1	YBR109C	EMP65	P40085	556 aa		3.9	□□□□□ -1.79
CMD1	YBR109C	YNL195C	P40168	261 aa		3.9	□□□□□ -1.79
CMD1	YBR109C	VID28	P40547	921 aa		3.9	□□□□□ -1.79
CMD1	YBR109C	YIR014W	P40570	242 aa		3.9	□□□□□ -1.79
CMD1	YBR109C	RNR4	P49723	345 aa	Known RBP	3.9	□□□□□ -1.79
CMD1	YBR109C	SPC105	P53148	917 aa		3.9	□□□□□ -1.79
CMD1	YBR109C	RTS3	P53289	263 aa		3.9	□□□□□ -1.79
CMD1	YBR109C	TAP42	Q04372	366 aa		3.9	□□□□□ -1.79
CMD1	YBR109C	PHM6	Q05637	104 aa		3.9	□□□□□ -1.79
CMD1	YBR109C	SLX4	Q12098	748 aa		3.9	□□□□□ -1.79
CMD1	YBR109C	NOP56	Q12460	504 aa	Known RBP RIP-Chip data	3.9	□□□□□ -1.79	not detected
CMD1	YBR109C	MPD2	Q99316	277 aa		3.9	□□□□□ -1.79
CMD1	YBR109C	HRP1	Q99383	534 aa	Known RBP	3.9	□□□□□ -1.79
CMD1	YBR109C	BCK1	Q01389	1478 aa		3.9	□□□□□ -1.79
CMD1	YBR109C	HCA4	P20448	770 aa	Known RBP	3.89	□□□□□ -1.79
CMD1	YBR109C	RNR1	P21524	888 aa	Known RBP	3.89	□□□□□ -1.79
CMD1	YBR109C	IME2	P32581	645 aa		3.89	□□□□□ -1.79
CMD1	YBR109C	PET127	P32606	800 aa		3.89	□□□□□ -1.79
CMD1	YBR109C	YAP3	P38749	330 aa		3.89	□□□□□ -1.79
CMD1	YBR109C	LYS9	P38999	446 aa		3.89	□□□□□ -1.79
CMD1	YBR109C	PEA2	P40091	420 aa		3.89	□□□□□ -1.79
CMD1	YBR109C	TPM2	P40414	161 aa		3.89	□□□□□ -1.79
CMD1	YBR109C	YIR042C	P40586	236 aa		3.89	□□□□□ -1.79
CMD1	YBR109C	IES1	P43579	692 aa		3.89	□□□□□ -1.79
CMD1	YBR109C	MUP1	P50276	574 aa		3.89	□□□□□ -1.79
CMD1	YBR109C	SLD3	P53135	668 aa		3.89	□□□□□ -1.79
CMD1	YBR109C	MTL1	P53214	551 aa		3.89	□□□□□ -1.79
CMD1	YBR109C	COX18	P53239	316 aa		3.89	□□□□□ -1.79
CMD1	YBR109C	RCR2	Q03446	210 aa	Known RBP	3.89	□□□□□ -1.79
CMD1	YBR109C	ECM38	Q05902	660 aa	Predicted RBP	3.89	□□□□□ -1.79
CMD1	YBR109C	VPS36	Q06696	566 aa		3.89	□□□□□ -1.79
CMD1	YBR109C	STP4	Q07351	490 aa		3.89	□□□□□ -1.79
CMD1	YBR109C	PEX15	Q08215	383 aa		3.89	□□□□□ -1.79
CMD1	YBR109C	VHS3	Q08438	674 aa		3.89	□□□□□ -1.79
CMD1	YBR109C	TRM13	Q12383	476 aa		3.89	□□□□□ -1.79
CMD1	YBR109C	ATG11	Q12527	1178 aa		3.89	□□□□□ -1.79
CMD1	YBR109C	NUP192	P47054	1683 aa		3.89	□□□□□ -1.79
CMD1	YBR109C	SST2	P11972	698 aa	Known RBP	3.88	□□□□□ -1.79
CMD1	YBR109C	FRS1	P15624	595 aa	Known RBP	3.88	□□□□□ -1.79
CMD1	YBR109C	IME1	P21190	360 aa		3.88	□□□□□ -1.79
CMD1	YBR109C	SEC6	P32844	805 aa		3.88	□□□□□ -1.79
CMD1	YBR109C	YPT7	P32939	208 aa		3.88	□□□□□ -1.79
CMD1	YBR109C	MOH1	P38191	138 aa		3.88	□□□□□ -1.79
CMD1	YBR109C	YBR053C	P38235	358 aa		3.88	□□□□□ -1.79
CMD1	YBR109C	GET2	P40056	285 aa		3.88	□□□□□ -1.79
CMD1	YBR109C	ELO3	P40319	345 aa		3.88	□□□□□ -1.79
CMD1	YBR109C	HOS4	P40480	1083 aa		3.88	□□□□□ -1.79
CMD1	YBR109C	BAP3	P41815	604 aa		3.88	□□□□□ -1.79
CMD1	YBR109C	NOP9	P47077	666 aa	Known RBP	3.88	□□□□□ -1.79
CMD1	YBR109C	AMA1	P50082	593 aa		3.88	□□□□□ -1.79
CMD1	YBR109C	PAP2	P53632	584 aa	Known RBP	3.88	□□□□□ -1.79
CMD1	YBR109C	DLT1	Q04216	342 aa		3.88	□□□□□ -1.79
CMD1	YBR109C	SGO1	Q08490	590 aa		3.88	□□□□□ -1.79
CMD1	YBR109C	YOR378W	Q08902	515 aa		3.88	□□□□□ -1.79
CMD1	YBR109C	ECM3	Q99252	613 aa		3.88	□□□□□ -1.79
CMD1	YBR109C	SIR4	P11978	1358 aa		3.88	□□□□□ -1.79
CMD1	YBR109C	KRE5	P22023	1365 aa		3.88	□□□□□ -1.79
CMD1	YBR109C	LEU2	P04173	364 aa	Predicted RBP	3.87	□□□□□ -1.79
CMD1	YBR109C	ATP4	P05626	244 aa		3.87	□□□□□ -1.79
CMD1	YBR109C	MET3	P08536	511 aa		3.87	□□□□□ -1.79
CMD1	YBR109C	LAT1	P12695	482 aa	Known RBP	3.87	□□□□□ -1.79
CMD1	YBR109C	CAF20	P12962	161 aa	Known RBP	3.87	□□□□□ -1.79
CMD1	YBR109C	SUI2	P20459	304 aa	Known RBP	3.87	□□□□□ -1.79
CMD1	YBR109C	HXT4	P32467	576 aa		3.87	□□□□□ -1.79
CMD1	YBR109C	HIR1	P32479	840 aa		3.87	□□□□□ -1.79
CMD1	YBR109C	DEF1	P35732	738 aa	Known RBP	3.87	□□□□□ -1.79
CMD1	YBR109C	VPS24	P36095	224 aa	Known RBP	3.87	□□□□□ -1.79
CMD1	YBR109C	DUN1	P39009	513 aa		3.87	□□□□□ -1.79
CMD1	YBR109C	RSC8	P43609	557 aa	Known RBP	3.87	□□□□□ -1.79
CMD1	YBR109C	MPP10	P47083	593 aa	Known RBP	3.87	□□□□□ -1.79
CMD1	YBR109C	CTK1	Q03957	528 aa	Known RBP	3.87	□□□□□ -1.79
CMD1	YBR109C	NGL1	Q08213	363 aa	Known RBP	3.87	□□□□□ -1.79
CMD1	YBR109C	RAD9	P14737	1309 aa		3.87	□□□□□ -1.79
CMD1	YBR109C	PSK1	P31374	1356 aa		3.87	□□□□□ -1.79
CMD1	YBR109C	ERG20	P08524	352 aa	Known RBP	3.86	□□□□□ -1.79
CMD1	YBR109C	ACO1	P19414	778 aa	Known RBP RIP-Chip data	3.86	□□□□□ -1.79	not detected

Retrieved 100 of 5,963 RNA–protein pairs in 25.9 ms