RNA–Protein interactions for RNA: ENST00000641711.1

PHGDH-224, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 712 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-224ENST00000641711 CNTROBQ8N137 903 aa12.35□□□□□ -0.43
PHGDH-224ENST00000641711 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.35□□□□□ -0.43
PHGDH-224ENST00000641711 RILPL2Q969X0 211 aa12.35□□□□□ -0.43
PHGDH-224ENST00000641711 EAF2Q96CJ1 260 aaPredicted RBP12.35□□□□□ -0.43
PHGDH-224ENST00000641711 NEUROD6Q96NK8 337 aa12.35□□□□□ -0.43
PHGDH-224ENST00000641711 GMLQ99445 158 aa12.35□□□□□ -0.43
PHGDH-224ENST00000641711 GPRC5DQ9NZD1 345 aa12.35□□□□□ -0.43
PHGDH-224ENST00000641711 HACL1Q9UJ83 578 aa12.35□□□□□ -0.43
PHGDH-224ENST00000641711 DBNLQ9UJU6 430 aaKnown RBP12.35□□□□□ -0.43
PHGDH-224ENST00000641711 ADAMTSL1Q8N6G6 1762 aa12.35□□□□□ -0.43
PHGDH-224ENST00000641711 DOCK2Q92608 1830 aa12.34□□□□□ -0.43
PHGDH-224ENST00000641711 CD2BP2O95400 341 aaKnown RBP12.34□□□□□ -0.43
PHGDH-224ENST00000641711 IFIT2P09913 472 aaKnown RBP12.34□□□□□ -0.43
PHGDH-224ENST00000641711 MCCP23508 829 aa12.34□□□□□ -0.43
PHGDH-224ENST00000641711 ADORA1P30542 326 aa12.34□□□□□ -0.43
PHGDH-224ENST00000641711 DEKP35659 375 aaKnown RBP12.34□□□□□ -0.43
PHGDH-224ENST00000641711 SCNN1DP51172 638 aa12.34□□□□□ -0.43
PHGDH-224ENST00000641711 GTF2IP78347 998 aa12.34□□□□□ -0.43
PHGDH-224ENST00000641711 PNMA8AQ86V59 439 aaPredicted RBP12.34□□□□□ -0.43
PHGDH-224ENST00000641711 ZNF784Q8NCA9 323 aaPredicted RBP12.34□□□□□ -0.43
PHGDH-224ENST00000641711 DBNDD2Q9BQY9 259 aa12.34□□□□□ -0.43
PHGDH-224ENST00000641711 GJA3Q9Y6H8 435 aa12.34□□□□□ -0.43
PHGDH-224ENST00000641711 COL1A1P02452 1464 aaPredicted RBP12.34□□□□□ -0.43
PHGDH-224ENST00000641711 ST18O60284 1047 aa12.33□□□□□ -0.44
PHGDH-224ENST00000641711 GMPSP49915 693 aaPredicted RBP12.33□□□□□ -0.44
PHGDH-224ENST00000641711 ZNF280AP59817 542 aaPredicted RBP12.33□□□□□ -0.44
PHGDH-224ENST00000641711 HDLBPQ00341 1268 aaKnown RBP12.33□□□□□ -0.44
PHGDH-224ENST00000641711 RASGRF1Q13972 1273 aa12.33□□□□□ -0.44
PHGDH-224ENST00000641711 MFSD14BQ5SR56 506 aa12.33□□□□□ -0.44
PHGDH-224ENST00000641711 TTC39AQ5SRH9 613 aa12.33□□□□□ -0.44
PHGDH-224ENST00000641711 OGFOD1Q8N543 542 aa12.33□□□□□ -0.44
PHGDH-224ENST00000641711 ADARB2Q9NS39 739 aaKnown RBP12.33□□□□□ -0.44
PHGDH-224ENST00000641711 HDAC9Q9UKV0 1011 aa12.33□□□□□ -0.44
PHGDH-224ENST00000641711 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.33□□□□□ -0.44
PHGDH-224ENST00000641711 MYH7P12883 1935 aa12.33□□□□□ -0.44
PHGDH-224ENST00000641711 H7C1D1 291 aa12.32□□□□□ -0.44
PHGDH-224ENST00000641711 SGSM2O43147 1006 aa12.32□□□□□ -0.44
PHGDH-224ENST00000641711 SPTY2D1Q68D10 685 aaPredicted RBP12.32□□□□□ -0.44
PHGDH-224ENST00000641711 USP50Q70EL3 339 aaPredicted RBP12.32□□□□□ -0.44
PHGDH-224ENST00000641711 MRIQ9BWK5 157 aa12.32□□□□□ -0.44
PHGDH-224ENST00000641711 USP17L8P0C7I0 530 aa12.31□□□□□ -0.44
PHGDH-224ENST00000641711 EPHX2P34913 555 aa12.31□□□□□ -0.44
PHGDH-224ENST00000641711 MCM2P49736 904 aa12.31□□□□□ -0.44
PHGDH-224ENST00000641711 MICALL2Q8IY33 904 aa12.31□□□□□ -0.44
PHGDH-224ENST00000641711 SPATA5Q8NB90 893 aa12.31□□□□□ -0.44
PHGDH-224ENST00000641711 FBXW7Q969H0 707 aa12.31□□□□□ -0.44
PHGDH-224ENST00000641711 EVI5LQ96CN4 794 aa12.31□□□□□ -0.44
PHGDH-224ENST00000641711 CCDC8Q9H0W5 538 aaPredicted RBP12.31□□□□□ -0.44
PHGDH-224ENST00000641711 TAF1DQ9H5J8 278 aaPredicted RBP12.31□□□□□ -0.44
PHGDH-224ENST00000641711 KCNQ5Q9NR82 932 aa12.31□□□□□ -0.44
PHGDH-224ENST00000641711 CNOT7Q9UIV1 285 aaKnown RBP12.31□□□□□ -0.44
PHGDH-224ENST00000641711 MYH2Q9UKX2 1941 aa12.31□□□□□ -0.44
PHGDH-224ENST00000641711 POTECB2RU33 542 aa12.3□□□□□ -0.44
PHGDH-224ENST00000641711 HIP1O00291 1037 aa12.3□□□□□ -0.44
PHGDH-224ENST00000641711 ATP5JP18859 108 aa12.3□□□□□ -0.44
PHGDH-224ENST00000641711 HSPA4P34932 840 aa12.3□□□□□ -0.44
PHGDH-224ENST00000641711 MCAMP43121 646 aa12.3□□□□□ -0.44
PHGDH-224ENST00000641711 RAB3GAP1Q15042 981 aa12.3□□□□□ -0.44
PHGDH-224ENST00000641711 SLF2Q8IX21 1173 aa12.3□□□□□ -0.44
PHGDH-224ENST00000641711 MTMR14Q8NCE2 650 aa12.3□□□□□ -0.44
PHGDH-224ENST00000641711 SPRYD3Q8NCJ5 442 aa12.3□□□□□ -0.44
PHGDH-224ENST00000641711 ZC3H15Q8WU90 426 aaKnown RBP12.3□□□□□ -0.44
PHGDH-224ENST00000641711 RUFY2Q8WXA3 655 aa12.3□□□□□ -0.44
PHGDH-224ENST00000641711 NMRK2Q9NPI5 230 aa12.3□□□□□ -0.44
PHGDH-224ENST00000641711 ANO2Q9NQ90 1003 aa12.3□□□□□ -0.44
PHGDH-224ENST00000641711 SNRKQ9NRH2 765 aa12.3□□□□□ -0.44
PHGDH-224ENST00000641711 TLR7Q9NYK1 1049 aaKnown RBP12.3□□□□□ -0.44
PHGDH-224ENST00000641711 HMG20BQ9P0W2 317 aa12.3□□□□□ -0.44
PHGDH-224ENST00000641711 SERPINA10Q9UK55 444 aa12.3□□□□□ -0.44
PHGDH-224ENST00000641711 AK9Q5TCS8 1911 aa12.3□□□□□ -0.44
PHGDH-224ENST00000641711 RAD50Q92878 1312 aa12.3□□□□□ -0.44
PHGDH-224ENST00000641711 KIF3CO14782 793 aa12.29□□□□□ -0.44
PHGDH-224ENST00000641711 MCM4P33991 863 aa12.29□□□□□ -0.44
PHGDH-224ENST00000641711 CHAF1AQ13111 956 aaPredicted RBP12.29□□□□□ -0.44
PHGDH-224ENST00000641711 TTF1Q15361 905 aaPredicted RBP12.29□□□□□ -0.44
PHGDH-224ENST00000641711 LDHDQ86WU2 507 aa12.29□□□□□ -0.44
PHGDH-224ENST00000641711 CERS5Q8N5B7 392 aa12.29□□□□□ -0.44
PHGDH-224ENST00000641711 LSG1Q9H089 658 aaKnown RBP12.29□□□□□ -0.44
PHGDH-224ENST00000641711 IQSEC3Q9UPP2 1182 aaPredicted RBP12.29□□□□□ -0.44
PHGDH-224ENST00000641711 ZBTB12Q9Y330 459 aaPredicted RBP12.29□□□□□ -0.44
PHGDH-224ENST00000641711 PITPNM2Q9BZ72 1349 aa12.29□□□□□ -0.44
PHGDH-224ENST00000641711 MYO5AQ9Y4I1 1855 aaKnown RBP12.28□□□□□ -0.44
PHGDH-224ENST00000641711 LDHBP07195 334 aaKnown RBP12.28□□□□□ -0.44
PHGDH-224ENST00000641711 HSP90AA1P07900 732 aaKnown RBP12.28□□□□□ -0.44
PHGDH-224ENST00000641711 EPS15P42566 896 aa12.28□□□□□ -0.44
PHGDH-224ENST00000641711 GSE1Q14687 1217 aa12.28□□□□□ -0.44
PHGDH-224ENST00000641711 KIF4BQ2VIQ3 1234 aa12.28□□□□□ -0.44
PHGDH-224ENST00000641711 CLEC17AQ6ZS10 378 aa12.28□□□□□ -0.44
PHGDH-224ENST00000641711 TICAM2Q86XR7 235 aa12.28□□□□□ -0.44
PHGDH-224ENST00000641711 KIAA0825Q8IV33 1275 aa12.28□□□□□ -0.44
PHGDH-224ENST00000641711 RBM46Q8TBY0 533 aaKnown RBP12.28□□□□□ -0.44
PHGDH-224ENST00000641711 IL25Q9H293 177 aa12.28□□□□□ -0.44
PHGDH-224ENST00000641711 RRAGCQ9HB90 399 aa12.28□□□□□ -0.44
PHGDH-224ENST00000641711 CWC22Q9HCG8 908 aaKnown RBP12.28□□□□□ -0.44
PHGDH-224ENST00000641711 MYOZ2Q9NPC6 264 aa12.28□□□□□ -0.44
PHGDH-224ENST00000641711 TOMM70O94826 608 aa12.27□□□□□ -0.45
PHGDH-224ENST00000641711 MAP4K4O95819 1239 aaPredicted RBP12.27□□□□□ -0.45
PHGDH-224ENST00000641711 GSTO1P78417 241 aa12.27□□□□□ -0.45
PHGDH-224ENST00000641711 HHIPL2Q6UWX4 724 aa12.27□□□□□ -0.45
PHGDH-224ENST00000641711 CERS3Q8IU89 383 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms