RNA–Protein interactions for RNA: ENST00000639695.1

RFC1-217, Transcript of replication factor C subunit 1, humanhuman

TSL 5 BASIC

Gene RFC1, Length 867 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-217ENST00000639695 NEFLP07196 543 aa9.75□□□□□ -0.85
RFC1-217ENST00000639695 HGSNATQ68CP4 663 aa9.75□□□□□ -0.85
RFC1-217ENST00000639695 ATCAYQ86WG3 371 aa9.75□□□□□ -0.85
RFC1-217ENST00000639695 FAM20CQ8IXL6 584 aa9.75□□□□□ -0.85
RFC1-217ENST00000639695 FAM161BQ96MY7 647 aa9.75□□□□□ -0.85
RFC1-217ENST00000639695 DBNDD2Q9BQY9 259 aa9.75□□□□□ -0.85
RFC1-217ENST00000639695 ADAM19Q9H013 955 aa9.75□□□□□ -0.85
RFC1-217ENST00000639695 METTL5Q9NRN9 209 aaKnown RBP9.75□□□□□ -0.85
RFC1-217ENST00000639695 FAM13BQ9NYF5 915 aa9.75□□□□□ -0.85
RFC1-217ENST00000639695 TRPA1O75762 1119 aa9.74□□□□□ -0.85
RFC1-217ENST00000639695 ENOX2Q16206 610 aaKnown RBP9.74□□□□□ -0.85
RFC1-217ENST00000639695 NCAPG2Q86XI2 1143 aa9.74□□□□□ -0.85
RFC1-217ENST00000639695 GJD3Q8N144 294 aa9.74□□□□□ -0.85
RFC1-217ENST00000639695 RNF34Q969K3 372 aa9.74□□□□□ -0.85
RFC1-217ENST00000639695 HHIPQ96QV1 700 aa9.74□□□□□ -0.85
RFC1-217ENST00000639695 ELP3Q9H9T3 547 aa9.74□□□□□ -0.85
RFC1-217ENST00000639695 SEC31BQ9NQW1 1179 aa9.74□□□□□ -0.85
RFC1-217ENST00000639695 FNDC3AQ9Y2H6 1198 aaKnown RBP9.74□□□□□ -0.85
RFC1-217ENST00000639695 PNMA6FA0A0J9YX94 578 aa9.73□□□□□ -0.85
RFC1-217ENST00000639695 NFKBIEO00221 500 aa9.73□□□□□ -0.85
RFC1-217ENST00000639695 IGHA2P01877 340 aa9.73□□□□□ -0.85
RFC1-217ENST00000639695 RPLP1P05386 114 aaKnown RBP9.73□□□□□ -0.85
RFC1-217ENST00000639695 BMP3P12645 472 aa9.73□□□□□ -0.85
RFC1-217ENST00000639695 PTPRAP18433 802 aa9.73□□□□□ -0.85
RFC1-217ENST00000639695 DTX1Q86Y01 620 aa9.73□□□□□ -0.85
RFC1-217ENST00000639695 NT5DC4Q86YG4 428 aa9.73□□□□□ -0.85
RFC1-217ENST00000639695 SHKBP1Q8TBC3 707 aa9.73□□□□□ -0.85
RFC1-217ENST00000639695 EDEM1Q92611 657 aa9.73□□□□□ -0.85
RFC1-217ENST00000639695 NUDT16Q96DE0 195 aaKnown RBP9.73□□□□□ -0.85
RFC1-217ENST00000639695 FRMD6Q96NE9 622 aa9.73□□□□□ -0.85
RFC1-217ENST00000639695 WWC3Q9ULE0 1092 aa9.73□□□□□ -0.85
RFC1-217ENST00000639695 HSP90B1P14625 803 aaKnown RBP9.72□□□□□ -0.85
RFC1-217ENST00000639695 HOXA10P31260 410 aaPredicted RBP9.72□□□□□ -0.85
RFC1-217ENST00000639695 NLRP12P59046 1061 aa9.72□□□□□ -0.85
RFC1-217ENST00000639695 LDLRAD1Q5T700 205 aa9.72□□□□□ -0.85
RFC1-217ENST00000639695 FAM117BQ6P1L5 589 aa9.72□□□□□ -0.85
RFC1-217ENST00000639695 PPP1R3FQ6ZSY5 799 aaPredicted RBP9.72□□□□□ -0.85
RFC1-217ENST00000639695 BEND4Q6ZU67 534 aa9.72□□□□□ -0.85
RFC1-217ENST00000639695 FBF1Q8TES7 1133 aa9.72□□□□□ -0.85
RFC1-217ENST00000639695 FAM83CQ9BQN1 747 aa9.72□□□□□ -0.85
RFC1-217ENST00000639695 H3BRJ5 948 aa9.71□□□□□ -0.86
RFC1-217ENST00000639695 ZNF76P36508 570 aa9.71□□□□□ -0.86
RFC1-217ENST00000639695 CLEC10AQ8IUN9 316 aa9.71□□□□□ -0.86
RFC1-217ENST00000639695 PUS7Q96PZ0 661 aaKnown RBP9.71□□□□□ -0.86
RFC1-217ENST00000639695 SALL4Q9UJQ4 1053 aa9.71□□□□□ -0.86
RFC1-217ENST00000639695 PDGFAP04085 211 aa9.7□□□□□ -0.86
RFC1-217ENST00000639695 CANXP27824 592 aaKnown RBP9.7□□□□□ -0.86
RFC1-217ENST00000639695 GNA15P30679 374 aa9.7□□□□□ -0.86
RFC1-217ENST00000639695 INTS5Q6P9B9 1019 aaKnown RBP9.7□□□□□ -0.86
RFC1-217ENST00000639695 C1orf127Q8N9H9 656 aa9.7□□□□□ -0.86
RFC1-217ENST00000639695 TGIF2Q9GZN2 237 aa9.7□□□□□ -0.86
RFC1-217ENST00000639695 KCNF1Q9H3M0 494 aa9.7□□□□□ -0.86
RFC1-217ENST00000639695 CCSER2Q9H7U1 834 aa9.7□□□□□ -0.86
RFC1-217ENST00000639695 A6NHS1 94 aa9.69□□□□□ -0.86
RFC1-217ENST00000639695 GRIK1P39086 918 aa9.69□□□□□ -0.86
RFC1-217ENST00000639695 TXKP42681 527 aa9.69□□□□□ -0.86
RFC1-217ENST00000639695 PIP4K2BP78356 416 aa9.69□□□□□ -0.86
RFC1-217ENST00000639695 GNL2Q13823 731 aaKnown RBP9.69□□□□□ -0.86
RFC1-217ENST00000639695 PDE12Q6L8Q7 609 aaKnown RBP9.69□□□□□ -0.86
RFC1-217ENST00000639695 FAM177A1Q8N128 213 aaPredicted RBP9.69□□□□□ -0.86
RFC1-217ENST00000639695 CSRNP1Q96S65 589 aa9.69□□□□□ -0.86
RFC1-217ENST00000639695 FANCCQ00597 558 aa9.68□□□□□ -0.86
RFC1-217ENST00000639695 ZNF438Q7Z4V0 828 aa9.68□□□□□ -0.86
RFC1-217ENST00000639695 METTL16Q86W50 562 aaKnown RBP9.68□□□□□ -0.86
RFC1-217ENST00000639695 SLC7A3Q8WY07 619 aa9.68□□□□□ -0.86
RFC1-217ENST00000639695 GGNBP2Q9H3C7 697 aa9.68□□□□□ -0.86
RFC1-217ENST00000639695 DZANK1Q9NVP4 752 aa9.68□□□□□ -0.86
RFC1-217ENST00000639695 SPG7Q9UQ90 795 aa9.68□□□□□ -0.86
RFC1-217ENST00000639695 WDR64B1ANS9 1081 aa9.67□□□□□ -0.86
RFC1-217ENST00000639695 SART1O43290 800 aaKnown RBP9.67□□□□□ -0.86
RFC1-217ENST00000639695 RAD51AP2Q09MP3 1159 aa9.67□□□□□ -0.86
RFC1-217ENST00000639695 C8orf34Q49A92 452 aa9.67□□□□□ -0.86
RFC1-217ENST00000639695 ANKRD34AQ69YU3 496 aa9.67□□□□□ -0.86
RFC1-217ENST00000639695 SHISA5Q8N114 240 aa9.67□□□□□ -0.86
RFC1-217ENST00000639695 MFSD14AQ96MC6 490 aa9.67□□□□□ -0.86
RFC1-217ENST00000639695 RUSC1Q9BVN2 902 aa9.67□□□□□ -0.86
RFC1-217ENST00000639695 RNF208Q9H0X6 261 aa9.67□□□□□ -0.86
RFC1-217ENST00000639695 DNAJC25Q9H1X3 360 aa9.67□□□□□ -0.86
RFC1-217ENST00000639695 RNF19AQ9NV58 838 aa9.67□□□□□ -0.86
RFC1-217ENST00000639695 RNF114Q9Y508 228 aa9.67□□□□□ -0.86
RFC1-217ENST00000639695 AK5Q9Y6K8 562 aa9.67□□□□□ -0.86
RFC1-217ENST00000639695 SGO2Q562F6 1265 aa9.66□□□□□ -0.86
RFC1-217ENST00000639695 SETDB2Q96T68 719 aa9.66□□□□□ -0.86
RFC1-217ENST00000639695 TANGO6Q9C0B7 1094 aa9.66□□□□□ -0.86
RFC1-217ENST00000639695 CHRDQ9H2X0 955 aa9.66□□□□□ -0.86
RFC1-217ENST00000639695 OSGEPQ9NPF4 335 aa9.66□□□□□ -0.86
RFC1-217ENST00000639695 SOX13Q9UN79 622 aa9.66□□□□□ -0.86
RFC1-217ENST00000639695 PDE2AO00408 941 aaPredicted RBP9.65□□□□□ -0.86
RFC1-217ENST00000639695 EIF1AYO14602 144 aaKnown RBP9.65□□□□□ -0.86
RFC1-217ENST00000639695 SLC43A3Q8NBI5 491 aa9.65□□□□□ -0.86
RFC1-217ENST00000639695 WNT8BQ93098 351 aa9.65□□□□□ -0.86
RFC1-217ENST00000639695 CAPN10Q9HC96 672 aa9.65□□□□□ -0.86
RFC1-217ENST00000639695 ADGRE2Q9UHX3 823 aa9.65□□□□□ -0.86
RFC1-217ENST00000639695 WNT11O96014 354 aa9.64□□□□□ -0.87
RFC1-217ENST00000639695 CRELD1Q96HD1 420 aa9.64□□□□□ -0.87
RFC1-217ENST00000639695 NLRP2Q9NX02 1062 aa9.64□□□□□ -0.87
RFC1-217ENST00000639695 CPNE3O75131 537 aaKnown RBP9.63□□□□□ -0.87
RFC1-217ENST00000639695 DLGAP3O95886 979 aa9.63□□□□□ -0.87
RFC1-217ENST00000639695 CES1P23141 567 aa9.63□□□□□ -0.87
RFC1-217ENST00000639695 CABP4P57796 275 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms