RNA–Protein interactions for RNA: ENST00000637815.1

CTSD-212, Transcript of cathepsin D, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CTSD, Length 2,003 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-212ENST00000637815 USP25Q9UHP3 1055 aa21.68■■□□□ 1.06
CTSD-212ENST00000637815 TAF1P21675 1872 aa21.68■■□□□ 1.06
CTSD-212ENST00000637815 ECM29Q5VYK3 1845 aa21.67■■□□□ 1.06
CTSD-212ENST00000637815 ZNF500O60304 480 aaPredicted RBP21.67■■□□□ 1.06
CTSD-212ENST00000637815 KDM4AO75164 1064 aa21.67■■□□□ 1.06
CTSD-212ENST00000637815 NR1I2O75469 434 aa21.67■■□□□ 1.06
CTSD-212ENST00000637815 APPP05067 770 aa21.67■■□□□ 1.06
CTSD-212ENST00000637815 FOSBP53539 338 aa21.67■■□□□ 1.06
CTSD-212ENST00000637815 ILDR1Q86SU0 546 aaPredicted RBP21.67■■□□□ 1.06
CTSD-212ENST00000637815 BICD2Q8TD16 824 aa21.67■■□□□ 1.06
CTSD-212ENST00000637815 ZNF396Q96N95 335 aaPredicted RBP21.67■■□□□ 1.06
CTSD-212ENST00000637815 ANGEL1Q9UNK9 670 aaKnown RBP21.67■■□□□ 1.06
CTSD-212ENST00000637815 RGL2O15211 777 aa21.67■■□□□ 1.06
CTSD-212ENST00000637815 MAGEB6Q8N7X4 407 aa21.67■■□□□ 1.06
CTSD-212ENST00000637815 LINC00116Q8NCU8 138 aa21.67■■□□□ 1.06
CTSD-212ENST00000637815 RGS22Q8NE09 1264 aa21.67■■□□□ 1.06
CTSD-212ENST00000637815 PATL2C9JE40 543 aaKnown RBP21.66■■□□□ 1.06
CTSD-212ENST00000637815 CHRNDQ07001 517 aa21.66■■□□□ 1.06
CTSD-212ENST00000637815 CAMK4Q16566 473 aa21.66■■□□□ 1.06
CTSD-212ENST00000637815 CYB5R4Q7L1T6 521 aa21.66■■□□□ 1.06
CTSD-212ENST00000637815 TYRO3Q06418 890 aa21.65■■□□□ 1.06
CTSD-212ENST00000637815 USP28Q96RU2 1077 aa21.65■■□□□ 1.06
CTSD-212ENST00000637815 CDC5LQ99459 802 aaKnown RBP21.65■■□□□ 1.06
CTSD-212ENST00000637815 EPB41L4AQ9HCS5 686 aaPredicted RBP21.65■■□□□ 1.06
CTSD-212ENST00000637815 DENND2AQ9ULE3 1009 aa21.65■■□□□ 1.06
CTSD-212ENST00000637815 MRVI1Q9Y6F6 885 aa21.65■■□□□ 1.06
CTSD-212ENST00000637815 SH2B2O14492 632 aaPredicted RBP21.65■■□□□ 1.06
CTSD-212ENST00000637815 TOM1O60784 492 aa21.65■■□□□ 1.06
CTSD-212ENST00000637815 PPFIA3O75145 1194 aa21.65■■□□□ 1.06
CTSD-212ENST00000637815 ADCY5O95622 1261 aa21.65■■□□□ 1.06
CTSD-212ENST00000637815 BCAMP50895 628 aa21.65■■□□□ 1.06
CTSD-212ENST00000637815 GUCY1B3Q02153 619 aa21.65■■□□□ 1.06
CTSD-212ENST00000637815 CNTNAP4Q9C0A0 1308 aa21.64■■□□□ 1.06
CTSD-212ENST00000637815 MBD4O95243 580 aa21.64■■□□□ 1.05
CTSD-212ENST00000637815 FAM98CQ17RN3 349 aaKnown RBP21.64■■□□□ 1.05
CTSD-212ENST00000637815 NKX2-3Q8TAU0 364 aa21.64■■□□□ 1.05
CTSD-212ENST00000637815 FAM200AQ8TCP9 573 aa21.64■■□□□ 1.05
CTSD-212ENST00000637815 TMEM87BQ96K49 555 aa21.64■■□□□ 1.05
CTSD-212ENST00000637815 ORC3Q9UBD5 711 aaPredicted RBP21.64■■□□□ 1.05
CTSD-212ENST00000637815 COL24A1Q17RW2 1714 aa21.64■■□□□ 1.05
CTSD-212ENST00000637815 BTAF1O14981 1849 aa21.64■■□□□ 1.05
CTSD-212ENST00000637815 NEDD4P46934 1319 aa21.64■■□□□ 1.05
CTSD-212ENST00000637815 PNPLA7Q6ZV29 1317 aa21.64■■□□□ 1.05
CTSD-212ENST00000637815 CPLX1O14810 134 aa21.63■■□□□ 1.05
CTSD-212ENST00000637815 SF3B3Q15393 1217 aaKnown RBP21.63■■□□□ 1.05
CTSD-212ENST00000637815 IFNL3Q8IZI9 196 aa21.63■■□□□ 1.05
CTSD-212ENST00000637815 FBXO18Q8NFZ0 1043 aa21.63■■□□□ 1.05
CTSD-212ENST00000637815 C8orf76Q96K31 380 aa21.63■■□□□ 1.05
CTSD-212ENST00000637815 FTOQ9C0B1 505 aaKnown RBP eCLIP21.63■■□□□ 1.05
CTSD-212ENST00000637815 ZNF804BA4D1E1 1349 aa21.63■■□□□ 1.05
CTSD-212ENST00000637815 CEBPZQ03701 1054 aaKnown RBP21.63■■□□□ 1.05
CTSD-212ENST00000637815 VPS72Q15906 364 aa21.63■■□□□ 1.05
CTSD-212ENST00000637815 B4E1Z4 1266 aa21.62■■□□□ 1.05
CTSD-212ENST00000637815 GNAT2P19087 354 aa21.62■■□□□ 1.05
CTSD-212ENST00000637815 PIP4K2BP78356 416 aa21.62■■□□□ 1.05
CTSD-212ENST00000637815 CKAP2LQ8IYA6 745 aa21.62■■□□□ 1.05
CTSD-212ENST00000637815 NAPBQ9H115 298 aa21.62■■□□□ 1.05
CTSD-212ENST00000637815 GSG1L2A8MUP6 293 aa21.62■■□□□ 1.05
CTSD-212ENST00000637815 PTMAP06454 111 aaKnown RBP21.62■■□□□ 1.05
CTSD-212ENST00000637815 ERFEQ4G0M1 354 aa21.62■■□□□ 1.05
CTSD-212ENST00000637815 IGDCC4Q8TDY8 1250 aa21.62■■□□□ 1.05
CTSD-212ENST00000637815 ARMT1Q9H993 441 aa21.62■■□□□ 1.05
CTSD-212ENST00000637815 APOA5Q6Q788 366 aa21.61■■□□□ 1.05
CTSD-212ENST00000637815 SGMS1Q86VZ5 419 aa21.61■■□□□ 1.05
CTSD-212ENST00000637815 RTEL1Q9NZ71 1219 aa21.61■■□□□ 1.05
CTSD-212ENST00000637815 MYH13Q9UKX3 1938 aa21.61■■□□□ 1.05
CTSD-212ENST00000637815 NHSQ6T4R5 1651 aa21.61■■□□□ 1.05
CTSD-212ENST00000637815 CACNA1SQ13698 1873 aa21.6■■□□□ 1.05
CTSD-212ENST00000637815 BRAPQ7Z569 592 aa21.6■■□□□ 1.05
CTSD-212ENST00000637815 ANKRD18AQ8IVF6 992 aa21.6■■□□□ 1.05
CTSD-212ENST00000637815 OFD1O75665 1012 aa21.6■■□□□ 1.05
CTSD-212ENST00000637815 METAP2P50579 478 aaKnown RBP eCLIP21.6■■□□□ 1.055e-7■■□□□ 12.4
CTSD-212ENST00000637815 C3orf67Q6ZVT6 689 aa21.6■■□□□ 1.05
CTSD-212ENST00000637815 RAB11FIP4Q86YS3 637 aa21.6■■□□□ 1.05
CTSD-212ENST00000637815 CCAR1Q8IX12 1150 aaKnown RBP21.6■■□□□ 1.05
CTSD-212ENST00000637815 CNNM2Q9H8M5 875 aa21.6■■□□□ 1.05
CTSD-212ENST00000637815 LY9Q9HBG7 655 aa21.6■■□□□ 1.05
CTSD-212ENST00000637815 BSDC1Q9NW68 430 aaPredicted RBP21.6■■□□□ 1.05
CTSD-212ENST00000637815 THSD7AQ9UPZ6 1657 aa21.59■■□□□ 1.05
CTSD-212ENST00000637815 CTAGE5O15320 804 aa21.58■■□□□ 1.05
CTSD-212ENST00000637815 AP5Z1O43299 807 aa21.58■■□□□ 1.05
CTSD-212ENST00000637815 CDKL5O76039 1030 aa21.58■■□□□ 1.05
CTSD-212ENST00000637815 LIFRP42702 1097 aa21.58■■□□□ 1.05
CTSD-212ENST00000637815 UBE4AQ14139 1066 aa21.58■■□□□ 1.05
CTSD-212ENST00000637815 SLC10A5Q5PT55 438 aa21.58■■□□□ 1.05
CTSD-212ENST00000637815 OTUD7BQ6GQQ9 843 aa21.58■■□□□ 1.05
CTSD-212ENST00000637815 LCORLQ8N3X6 602 aa21.58■■□□□ 1.05
CTSD-212ENST00000637815 GOLPH3LQ9H4A5 285 aa21.58■■□□□ 1.05
CTSD-212ENST00000637815 TAF1LQ8IZX4 1826 aa21.58■■□□□ 1.05
CTSD-212ENST00000637815 SNW1Q13573 536 aaKnown RBP21.58■■□□□ 1.04
CTSD-212ENST00000637815 ANO6Q4KMQ2 910 aa21.58■■□□□ 1.04
CTSD-212ENST00000637815 AKNAD1Q5T1N1 836 aa21.58■■□□□ 1.04
CTSD-212ENST00000637815 RC3H1Q5TC82 1133 aaKnown RBP21.58■■□□□ 1.04
CTSD-212ENST00000637815 ENGASEQ8NFI3 743 aa21.58■■□□□ 1.04
CTSD-212ENST00000637815 NACAP1Q9BZK3 213 aa21.58■■□□□ 1.04
CTSD-212ENST00000637815 POLR3EQ9NVU0 708 aa21.58■■□□□ 1.04
CTSD-212ENST00000637815 LRP2BPQ9P2M1 347 aa21.58■■□□□ 1.04
CTSD-212ENST00000637815 TACC3Q9Y6A5 838 aa21.58■■□□□ 1.04
CTSD-212ENST00000637815 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP21.58■■□□□ 1.043e-10■□□□□ 9.8
CTSD-212ENST00000637815 NID2Q14112 1375 aa21.57■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms