RNA–Protein interactions for RNA: ENST00000636012.1

CACNA1A-221, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 7,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-221ENST00000636012 BEGAINQ9BUH8 593 aa17.98■□□□□ 0.47
CACNA1A-221ENST00000636012 EIF6P56537 245 aaKnown RBP17.98■□□□□ 0.47
CACNA1A-221ENST00000636012 ATRIPQ8WXE1 791 aa17.98■□□□□ 0.47
CACNA1A-221ENST00000636012 RBM17Q96I25 401 aaKnown RBP17.98■□□□□ 0.47
CACNA1A-221ENST00000636012 DIXDC1Q155Q3 683 aa17.98■□□□□ 0.47
CACNA1A-221ENST00000636012 NOP56O00567 594 aaKnown RBP17.97■□□□□ 0.47
CACNA1A-221ENST00000636012 ANKFY1Q9P2R3 1169 aa17.97■□□□□ 0.47
CACNA1A-221ENST00000636012 MKRN1Q9UHC7 482 aaKnown RBP17.97■□□□□ 0.47
CACNA1A-221ENST00000636012 IRS4O14654 1257 aaPredicted RBP17.97■□□□□ 0.47
CACNA1A-221ENST00000636012 ATP2A2P16615 1042 aaKnown RBP17.97■□□□□ 0.47
CACNA1A-221ENST00000636012 PRKG1Q13976 671 aa17.97■□□□□ 0.47
CACNA1A-221ENST00000636012 LCA5Q86VQ0 697 aa17.97■□□□□ 0.47
CACNA1A-221ENST00000636012 TMX3Q96JJ7 454 aa17.97■□□□□ 0.47
CACNA1A-221ENST00000636012 NCAPD3P42695 1498 aa17.97■□□□□ 0.47
CACNA1A-221ENST00000636012 TRIM75PA6NK02 468 aa17.97■□□□□ 0.47
CACNA1A-221ENST00000636012 CCNT1O60563 726 aaKnown RBP17.97■□□□□ 0.47
CACNA1A-221ENST00000636012 GMNNO75496 209 aa17.97■□□□□ 0.47
CACNA1A-221ENST00000636012 PARP1P09874 1014 aaKnown RBP17.97■□□□□ 0.47
CACNA1A-221ENST00000636012 GNAT2P19087 354 aa17.97■□□□□ 0.47
CACNA1A-221ENST00000636012 PAXBP1Q9Y5B6 917 aa17.97■□□□□ 0.47
CACNA1A-221ENST00000636012 BICDL2A1A5D9 508 aa17.97■□□□□ 0.47
CACNA1A-221ENST00000636012 GNPATO15228 680 aa17.97■□□□□ 0.47
CACNA1A-221ENST00000636012 BIRC3Q13489 604 aa17.97■□□□□ 0.47
CACNA1A-221ENST00000636012 STMN4Q9H169 189 aaPredicted RBP17.97■□□□□ 0.47
CACNA1A-221ENST00000636012 DNAI1Q9UI46 699 aa17.97■□□□□ 0.47
CACNA1A-221ENST00000636012 RTL1A6NKG5 1358 aa17.96■□□□□ 0.47
CACNA1A-221ENST00000636012 SYT1P21579 422 aa17.96■□□□□ 0.47
CACNA1A-221ENST00000636012 PPP2R5DQ14738 602 aa17.96■□□□□ 0.47
CACNA1A-221ENST00000636012 WDR44Q5JSH3 913 aa17.96■□□□□ 0.47
CACNA1A-221ENST00000636012 TRIM7Q9C029 511 aa17.96■□□□□ 0.47
CACNA1A-221ENST00000636012 SLC8A3P57103 927 aa17.96■□□□□ 0.47
CACNA1A-221ENST00000636012 USP48Q86UV5 1035 aa17.96■□□□□ 0.47
CACNA1A-221ENST00000636012 DYNC1I1O14576 645 aa17.96■□□□□ 0.47
CACNA1A-221ENST00000636012 GNA11P29992 359 aa17.96■□□□□ 0.47
CACNA1A-221ENST00000636012 NOL12Q9UGY1 213 aaKnown RBP eCLIP17.96■□□□□ 0.47
CACNA1A-221ENST00000636012 V9GYY5 206 aaPredicted RBP17.96■□□□□ 0.47
CACNA1A-221ENST00000636012 SARNPP82979 210 aaKnown RBP17.96■□□□□ 0.47
CACNA1A-221ENST00000636012 TRAPPC3LQ5T215 181 aa17.96■□□□□ 0.47
CACNA1A-221ENST00000636012 APOBRQ0VD83 1088 aa17.96■□□□□ 0.46
CACNA1A-221ENST00000636012 LRRC59Q96AG4 307 aaKnown RBP17.96■□□□□ 0.46
CACNA1A-221ENST00000636012 CCDC129Q6ZRS4 1044 aa17.95■□□□□ 0.46
CACNA1A-221ENST00000636012 MYCLP12524 364 aaPredicted RBP17.95■□□□□ 0.46
CACNA1A-221ENST00000636012 FCHSD1Q86WN1 690 aa17.95■□□□□ 0.46
CACNA1A-221ENST00000636012 EYA3Q99504 573 aa17.95■□□□□ 0.46
CACNA1A-221ENST00000636012 IL15P40933 162 aaPredicted RBP17.95■□□□□ 0.46
CACNA1A-221ENST00000636012 ARFGAP3Q9NP61 516 aa17.95■□□□□ 0.46
CACNA1A-221ENST00000636012 GUCA1BQ9UMX6 200 aa17.95■□□□□ 0.46
CACNA1A-221ENST00000636012 CTAGE15A4D2H0 777 aa17.95■□□□□ 0.46
CACNA1A-221ENST00000636012 DDX39AO00148 427 aaKnown RBP17.95■□□□□ 0.46
CACNA1A-221ENST00000636012 CTAGE8P0CG41 777 aa17.95■□□□□ 0.46
CACNA1A-221ENST00000636012 CTAGE6Q86UF2 777 aa17.95■□□□□ 0.46
CACNA1A-221ENST00000636012 CTAGE4Q8IX94 777 aa17.95■□□□□ 0.46
CACNA1A-221ENST00000636012 UIMC1Q96RL1 719 aa17.95■□□□□ 0.46
CACNA1A-221ENST00000636012 DNMBPQ6XZF7 1577 aa17.95■□□□□ 0.46
CACNA1A-221ENST00000636012 IL2RBP14784 551 aa17.95■□□□□ 0.46
CACNA1A-221ENST00000636012 DNAJC21Q5F1R6 531 aaKnown RBP17.95■□□□□ 0.46
CACNA1A-221ENST00000636012 MSL1Q68DK7 614 aa17.95■□□□□ 0.46
CACNA1A-221ENST00000636012 KIAA1524Q8TCG1 905 aa17.95■□□□□ 0.46
CACNA1A-221ENST00000636012 CCDC42Q96M95 316 aa17.95■□□□□ 0.46
CACNA1A-221ENST00000636012 NPHP3Q7Z494 1330 aa17.95■□□□□ 0.46
CACNA1A-221ENST00000636012 STX10O60499 249 aa17.94■□□□□ 0.46
CACNA1A-221ENST00000636012 NMIQ13287 307 aaPredicted RBP17.94■□□□□ 0.46
CACNA1A-221ENST00000636012 GOLGA1Q92805 767 aa17.94■□□□□ 0.46
CACNA1A-221ENST00000636012 PTPDC1A2A3K4 754 aa17.94■□□□□ 0.46
CACNA1A-221ENST00000636012 DNM1Q05193 864 aaKnown RBP17.94■□□□□ 0.46
CACNA1A-221ENST00000636012 CEP57Q86XR8 500 aa17.94■□□□□ 0.46
CACNA1A-221ENST00000636012 MRRFQ96E11 262 aaKnown RBP17.94■□□□□ 0.46
CACNA1A-221ENST00000636012 GTF2A1P52655 376 aaPredicted RBP17.94■□□□□ 0.46
CACNA1A-221ENST00000636012 KARSQ15046 597 aaKnown RBP17.94■□□□□ 0.46
CACNA1A-221ENST00000636012 MRPS27Q92552 414 aaKnown RBP17.94■□□□□ 0.46
CACNA1A-221ENST00000636012 SEC23IPQ9Y6Y8 1000 aaKnown RBP17.94■□□□□ 0.46
CACNA1A-221ENST00000636012 MIPOL1Q8TD10 442 aa17.94■□□□□ 0.46
CACNA1A-221ENST00000636012 PPIP5K1Q6PFW1 1433 aa17.94■□□□□ 0.46
CACNA1A-221ENST00000636012 EPB41P11171 864 aaKnown RBP17.93■□□□□ 0.46
CACNA1A-221ENST00000636012 LETM2Q2VYF4 491 aa17.93■□□□□ 0.46
CACNA1A-221ENST00000636012 UBLCP1Q8WVY7 318 aaPredicted RBP17.93■□□□□ 0.46
CACNA1A-221ENST00000636012 SEC62Q99442 399 aaKnown RBP17.93■□□□□ 0.46
CACNA1A-221ENST00000636012 DNAJC25Q9H1X3 360 aa17.93■□□□□ 0.46
CACNA1A-221ENST00000636012 CCDC171Q6TFL3 1326 aa17.93■□□□□ 0.46
CACNA1A-221ENST00000636012 TLDC2A0PJX2 215 aa17.93■□□□□ 0.46
CACNA1A-221ENST00000636012 MAFGO15525 162 aa17.93■□□□□ 0.46
CACNA1A-221ENST00000636012 KRT86O43790 486 aa17.93■□□□□ 0.46
CACNA1A-221ENST00000636012 KRT83P78385 493 aa17.93■□□□□ 0.46
CACNA1A-221ENST00000636012 BMP2KLQ5H9B9 411 aa17.93■□□□□ 0.46
CACNA1A-221ENST00000636012 KIFAP3Q92845 792 aa17.93■□□□□ 0.46
CACNA1A-221ENST00000636012 FAM114A2Q9NRY5 505 aa17.93■□□□□ 0.46
CACNA1A-221ENST00000636012 VWA3AA6NCI4 1184 aa17.93■□□□□ 0.46
CACNA1A-221ENST00000636012 SKILP12757 684 aa17.93■□□□□ 0.46
CACNA1A-221ENST00000636012 TBC1D31Q96DN5 1066 aa17.93■□□□□ 0.46
CACNA1A-221ENST00000636012 CCT6AP40227 531 aaKnown RBP17.92■□□□□ 0.46
CACNA1A-221ENST00000636012 ARHGEF10LQ9HCE6 1279 aa17.92■□□□□ 0.46
CACNA1A-221ENST00000636012 LZTFL1Q9NQ48 299 aa17.92■□□□□ 0.46
CACNA1A-221ENST00000636012 ANKRD2Q9GZV1 360 aa17.92■□□□□ 0.46
CACNA1A-221ENST00000636012 ZEB2O60315 1214 aa17.92■□□□□ 0.46
CACNA1A-221ENST00000636012 NUCB1Q02818 461 aa17.92■□□□□ 0.46
CACNA1A-221ENST00000636012 TRPC3Q13507 836 aa17.92■□□□□ 0.46
CACNA1A-221ENST00000636012 STRN3Q13033 797 aa17.92■□□□□ 0.46
CACNA1A-221ENST00000636012 AKAP4Q5JQC9 854 aa17.92■□□□□ 0.46
CACNA1A-221ENST00000636012 IVNS1ABPQ9Y6Y0 642 aa17.92■□□□□ 0.46
CACNA1A-221ENST00000636012 SPTLC2O15270 562 aa17.92■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms