RNA–Protein interactions for RNA: ENST00000626847.2

SMN2-214, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMN2, Length 1,440 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-214ENST00000626847 SIX5Q8N196 739 aa9.9□□□□□ -0.83
SMN2-214ENST00000626847 TPCN2Q8NHX9 752 aa9.9□□□□□ -0.83
SMN2-214ENST00000626847 NOL10Q9BSC4 688 aaKnown RBP9.9□□□□□ -0.83
SMN2-214ENST00000626847 C1QTNF2Q9BXJ5 285 aa9.9□□□□□ -0.83
SMN2-214ENST00000626847 CHCHD3Q9NX63 227 aaKnown RBP9.9□□□□□ -0.83
SMN2-214ENST00000626847 NOL7Q9UMY1 257 aaKnown RBP9.9□□□□□ -0.83
SMN2-214ENST00000626847 ZBTB7BO15156 539 aaPredicted RBP9.89□□□□□ -0.83
SMN2-214ENST00000626847 MYCP01106 439 aaPredicted RBP9.89□□□□□ -0.83
SMN2-214ENST00000626847 CHAF1AQ13111 956 aaPredicted RBP9.89□□□□□ -0.83
SMN2-214ENST00000626847 SYCP1Q15431 976 aa9.89□□□□□ -0.83
SMN2-214ENST00000626847 TRMT44Q8IYL2 757 aaKnown RBP9.89□□□□□ -0.83
SMN2-214ENST00000626847 JADE2Q9NQC1 790 aa9.89□□□□□ -0.83
SMN2-214ENST00000626847 CWC25Q9NXE8 425 aaPredicted RBP9.89□□□□□ -0.83
SMN2-214ENST00000626847 BTG4Q9NY30 223 aa9.89□□□□□ -0.83
SMN2-214ENST00000626847 KIAA1024Q9UPX6 916 aa9.89□□□□□ -0.83
SMN2-214ENST00000626847 NEXMIFQ5QGS0 1516 aa9.88□□□□□ -0.83
SMN2-214ENST00000626847 DLC1Q96QB1 1528 aa9.88□□□□□ -0.83
SMN2-214ENST00000626847 DAPK1P53355 1430 aa9.88□□□□□ -0.83
SMN2-214ENST00000626847 TRAF1Q13077 416 aa9.88□□□□□ -0.83
SMN2-214ENST00000626847 RABEP1Q15276 862 aa9.88□□□□□ -0.83
SMN2-214ENST00000626847 COL13A1Q5TAT6 717 aaPredicted RBP9.88□□□□□ -0.83
SMN2-214ENST00000626847 KCTD15Q96SI1 283 aaPredicted RBP9.88□□□□□ -0.83
SMN2-214ENST00000626847 HINFPQ9BQA5 517 aa9.88□□□□□ -0.83
SMN2-214ENST00000626847 IQGAP3Q86VI3 1631 aa9.88□□□□□ -0.83
SMN2-214ENST00000626847 IL16Q14005 1332 aa9.88□□□□□ -0.83
SMN2-214ENST00000626847 ANKRD30AQ9BXX3 1397 aa9.87□□□□□ -0.83
SMN2-214ENST00000626847 CDC42BPGQ6DT37 1551 aa9.87□□□□□ -0.83
SMN2-214ENST00000626847 HFM1A2PYH4 1435 aa9.87□□□□□ -0.83
SMN2-214ENST00000626847 CCDC144AA2RUR9 1427 aa9.87□□□□□ -0.83
SMN2-214ENST00000626847 PRAG1Q86YV5 1406 aa9.87□□□□□ -0.83
SMN2-214ENST00000626847 PRMT3O60678 531 aa9.87□□□□□ -0.83
SMN2-214ENST00000626847 PPFIA2O75334 1257 aa9.87□□□□□ -0.83
SMN2-214ENST00000626847 TRIM32Q13049 653 aa9.87□□□□□ -0.83
SMN2-214ENST00000626847 MUM1L1Q5H9M0 696 aa9.87□□□□□ -0.83
SMN2-214ENST00000626847 VASH1Q7L8A9 365 aaPredicted RBP9.87□□□□□ -0.83
SMN2-214ENST00000626847 KRT28Q7Z3Y7 464 aa9.87□□□□□ -0.83
SMN2-214ENST00000626847 SUGP1Q8IWZ8 645 aaKnown RBP9.87□□□□□ -0.83
SMN2-214ENST00000626847 ABCA3Q99758 1704 aa9.87□□□□□ -0.83
SMN2-214ENST00000626847 TNS3Q68CZ2 1445 aa9.86□□□□□ -0.83
SMN2-214ENST00000626847 A0A1B0GUL7 405 aa9.86□□□□□ -0.83
SMN2-214ENST00000626847 SFI1A8K8P3 1242 aa9.86□□□□□ -0.83
SMN2-214ENST00000626847 CT47B1P0C2W7 299 aaPredicted RBP9.86□□□□□ -0.83
SMN2-214ENST00000626847 VARSP26640 1264 aaKnown RBP9.86□□□□□ -0.83
SMN2-214ENST00000626847 SF3A1Q15459 793 aaKnown RBP9.86□□□□□ -0.83
SMN2-214ENST00000626847 TERF2Q15554 542 aa9.86□□□□□ -0.83
SMN2-214ENST00000626847 GPR162Q16538 588 aa9.86□□□□□ -0.83
SMN2-214ENST00000626847 SKOR2Q2VWA4 1001 aaPredicted RBP9.86□□□□□ -0.83
SMN2-214ENST00000626847 GET4Q7L5D6 327 aaPredicted RBP9.86□□□□□ -0.83
SMN2-214ENST00000626847 CFAP53Q96M91 514 aa9.86□□□□□ -0.83
SMN2-214ENST00000626847 CEP89Q96ST8 783 aa9.86□□□□□ -0.83
SMN2-214ENST00000626847 JRKLQ9Y4A0 524 aa9.86□□□□□ -0.83
SMN2-214ENST00000626847 GOLGB1Q14789 3259 aaKnown RBP9.85□□□□□ -0.83
SMN2-214ENST00000626847 RNF223E7ERA6 249 aa9.85□□□□□ -0.83
SMN2-214ENST00000626847 EPB41L2O43491 1005 aaKnown RBP9.85□□□□□ -0.83
SMN2-214ENST00000626847 REC8O95072 547 aa9.85□□□□□ -0.83
SMN2-214ENST00000626847 ATP2B1P20020 1258 aa9.85□□□□□ -0.83
SMN2-214ENST00000626847 NEXNQ0ZGT2 675 aa9.85□□□□□ -0.83
SMN2-214ENST00000626847 ATP2B3Q16720 1220 aa9.85□□□□□ -0.83
SMN2-214ENST00000626847 SUN2Q9UH99 717 aa9.85□□□□□ -0.83
SMN2-214ENST00000626847 PPME1Q9Y570 386 aa9.85□□□□□ -0.83
SMN2-214ENST00000626847 PCDHGA11Q9Y5H2 935 aa9.85□□□□□ -0.83
SMN2-214ENST00000626847 FAM200BP0CF97 657 aa9.84□□□□□ -0.83
SMN2-214ENST00000626847 NAP1L1P55209 391 aaKnown RBP9.84□□□□□ -0.83
SMN2-214ENST00000626847 FOXD4Q12950 439 aaPredicted RBP9.84□□□□□ -0.83
SMN2-214ENST00000626847 ARID5BQ14865 1188 aa9.84□□□□□ -0.83
SMN2-214ENST00000626847 AMOTQ4VCS5 1084 aa9.84□□□□□ -0.83
SMN2-214ENST00000626847 NLRP13Q86W25 1043 aa9.84□□□□□ -0.83
SMN2-214ENST00000626847 ANKLE1Q8NAG6 615 aa9.84□□□□□ -0.83
SMN2-214ENST00000626847 ACRBPQ8NEB7 543 aa9.84□□□□□ -0.83
SMN2-214ENST00000626847 ATL2Q8NHH9 583 aa9.84□□□□□ -0.83
SMN2-214ENST00000626847 ZBTB9Q96C00 473 aa9.84□□□□□ -0.83
SMN2-214ENST00000626847 PANK2Q9BZ23 570 aa9.84□□□□□ -0.83
SMN2-214ENST00000626847 E9PCH4 1651 aa9.84□□□□□ -0.83
SMN2-214ENST00000626847 PES1O00541 588 aaKnown RBP9.83□□□□□ -0.84
SMN2-214ENST00000626847 WNT7BP56706 349 aa9.83□□□□□ -0.84
SMN2-214ENST00000626847 HNRNPUQ00839 825 aaKnown RBP eCLIP9.83□□□□□ -0.84
SMN2-214ENST00000626847 PDCD2Q16342 344 aaPredicted RBP9.83□□□□□ -0.84
SMN2-214ENST00000626847 FILIP1LQ4L180 1135 aa9.83□□□□□ -0.84
SMN2-214ENST00000626847 FMNL3Q8IVF7 1028 aa9.83□□□□□ -0.84
SMN2-214ENST00000626847 EHBP1Q8NDI1 1231 aa9.83□□□□□ -0.84
SMN2-214ENST00000626847 SYAP1Q96A49 352 aaPredicted RBP9.83□□□□□ -0.84
SMN2-214ENST00000626847 AGAP3Q96P47 875 aa9.83□□□□□ -0.84
SMN2-214ENST00000626847 ETAA1Q9NY74 926 aa9.83□□□□□ -0.84
SMN2-214ENST00000626847 MAP3K5Q99683 1374 aa9.83□□□□□ -0.84
SMN2-214ENST00000626847 RRBP1Q9P2E9 1410 aaKnown RBP9.83□□□□□ -0.84
SMN2-214ENST00000626847 TMCO5BA8MYB1 307 aa9.82□□□□□ -0.84
SMN2-214ENST00000626847 MARCH6O60337 910 aa9.82□□□□□ -0.84
SMN2-214ENST00000626847 DKK1O94907 266 aa9.82□□□□□ -0.84
SMN2-214ENST00000626847 SERPINB4P48594 390 aa9.82□□□□□ -0.84
SMN2-214ENST00000626847 CCT2P78371 535 aaKnown RBP9.82□□□□□ -0.84
SMN2-214ENST00000626847 ADCY2Q08462 1091 aa9.82□□□□□ -0.84
SMN2-214ENST00000626847 MAP9Q49MG5 647 aa9.82□□□□□ -0.84
SMN2-214ENST00000626847 TNS4Q8IZW8 715 aa9.82□□□□□ -0.84
SMN2-214ENST00000626847 ANKRD20A12PQ8NF67 263 aa9.82□□□□□ -0.84
SMN2-214ENST00000626847 MAF1Q9H063 256 aa9.82□□□□□ -0.84
SMN2-214ENST00000626847 SPATA31A1Q5TZJ5 1347 aa9.82□□□□□ -0.84
SMN2-214ENST00000626847 LGR5O75473 907 aa9.82□□□□□ -0.84
SMN2-214ENST00000626847 COPB2P35606 906 aa9.82□□□□□ -0.84
SMN2-214ENST00000626847 MAP2K2P36507 400 aa9.82□□□□□ -0.84
SMN2-214ENST00000626847 RHBDL3P58872 404 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms