RNA–Protein interactions for RNA: ENST00000625926.1

SSBP4-215, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5 BASIC

Gene SSBP4, Length 162 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-215ENST00000625926 SAGE1Q9NXZ1 904 aa13.48□□□□□ -0.25
SSBP4-215ENST00000625926 ZNF70Q9UC06 446 aaPredicted RBP13.48□□□□□ -0.25
SSBP4-215ENST00000625926 ANGEL1Q9UNK9 670 aaKnown RBP13.48□□□□□ -0.25
SSBP4-215ENST00000625926 PA2G4Q9UQ80 394 aaKnown RBP13.48□□□□□ -0.25
SSBP4-215ENST00000625926 SUGT1Q9Y2Z0 365 aa13.48□□□□□ -0.25
SSBP4-215ENST00000625926 AOX1Q06278 1338 aa13.47□□□□□ -0.25
SSBP4-215ENST00000625926 PPP1R12BO60237 982 aaPredicted RBP13.47□□□□□ -0.25
SSBP4-215ENST00000625926 GNAI2P04899 355 aa13.47□□□□□ -0.25
SSBP4-215ENST00000625926 MTX1Q13505 466 aa13.47□□□□□ -0.25
SSBP4-215ENST00000625926 RASA3Q14644 834 aa13.47□□□□□ -0.25
SSBP4-215ENST00000625926 LDLRAD1Q5T700 205 aa13.47□□□□□ -0.25
SSBP4-215ENST00000625926 WDR66Q8TBY9 1149 aa13.47□□□□□ -0.25
SSBP4-215ENST00000625926 TEKT1Q969V4 418 aa13.47□□□□□ -0.25
SSBP4-215ENST00000625926 RNF186Q9NXI6 227 aa13.47□□□□□ -0.25
SSBP4-215ENST00000625926 TNNQ9UQP3 1299 aa13.47□□□□□ -0.25
SSBP4-215ENST00000625926 COL1A1P02452 1464 aaPredicted RBP13.47□□□□□ -0.25
SSBP4-215ENST00000625926 THSD7BQ9C0I4 1608 aa13.46□□□□□ -0.25
SSBP4-215ENST00000625926 SPEF2Q9C093 1822 aa13.46□□□□□ -0.25
SSBP4-215ENST00000625926 TRPA1O75762 1119 aa13.46□□□□□ -0.25
SSBP4-215ENST00000625926 TNNI2P48788 182 aa13.46□□□□□ -0.25
SSBP4-215ENST00000625926 MAP3K11Q16584 847 aa13.46□□□□□ -0.25
SSBP4-215ENST00000625926 NBPF12Q5TAG4 269 aaPredicted RBP13.46□□□□□ -0.25
SSBP4-215ENST00000625926 MAST3O60307 1309 aa13.45□□□□□ -0.26
SSBP4-215ENST00000625926 ZBED9Q6R2W3 1325 aa13.45□□□□□ -0.26
SSBP4-215ENST00000625926 UNCXA6NJT0 531 aa13.45□□□□□ -0.26
SSBP4-215ENST00000625926 TMEM57Q8N5G2 664 aa13.45□□□□□ -0.26
SSBP4-215ENST00000625926 SLC10A4Q96EP9 437 aa13.45□□□□□ -0.26
SSBP4-215ENST00000625926 ZDHHC15Q96MV8 337 aa13.45□□□□□ -0.26
SSBP4-215ENST00000625926 FZD1Q9UP38 647 aa13.45□□□□□ -0.26
SSBP4-215ENST00000625926 TRPM7Q96QT4 1865 aa13.44□□□□□ -0.26
SSBP4-215ENST00000625926 TCP10L2B9ZVM9 353 aa13.44□□□□□ -0.26
SSBP4-215ENST00000625926 SEMA3EO15041 775 aa13.44□□□□□ -0.26
SSBP4-215ENST00000625926 IREB2P48200 963 aaKnown RBP13.44□□□□□ -0.26
SSBP4-215ENST00000625926 HHIPL2Q6UWX4 724 aa13.44□□□□□ -0.26
SSBP4-215ENST00000625926 DENND2AQ9ULE3 1009 aa13.44□□□□□ -0.26
SSBP4-215ENST00000625926 AKAP2Q9Y2D5 859 aa13.44□□□□□ -0.26
SSBP4-215ENST00000625926 PSME4Q14997 1843 aa13.43□□□□□ -0.26
SSBP4-215ENST00000625926 PAPPA2Q9BXP8 1791 aa13.43□□□□□ -0.26
SSBP4-215ENST00000625926 USP2O75604 605 aaPredicted RBP13.43□□□□□ -0.26
SSBP4-215ENST00000625926 TM4SF4P48230 202 aa13.43□□□□□ -0.26
SSBP4-215ENST00000625926 TIMM10P62072 90 aa13.43□□□□□ -0.26
SSBP4-215ENST00000625926 SREBF2Q12772 1141 aa13.43□□□□□ -0.26
SSBP4-215ENST00000625926 TFCP2Q12800 502 aa13.43□□□□□ -0.26
SSBP4-215ENST00000625926 MKRN3Q13064 507 aaKnown RBP13.43□□□□□ -0.26
SSBP4-215ENST00000625926 SPRYD7Q5W111 196 aa13.43□□□□□ -0.26
SSBP4-215ENST00000625926 CCDC102BQ68D86 513 aa13.43□□□□□ -0.26
SSBP4-215ENST00000625926 APOBEC3HQ6NTF7 200 aaKnown RBP13.43□□□□□ -0.26
SSBP4-215ENST00000625926 FTSJ3Q8IY81 847 aaKnown RBP13.43□□□□□ -0.26
SSBP4-215ENST00000625926 TMOD2Q9NZR1 351 aa13.43□□□□□ -0.26
SSBP4-215ENST00000625926 ZBTB22O15209 634 aa13.42□□□□□ -0.26
SSBP4-215ENST00000625926 ADORA1P30542 326 aa13.42□□□□□ -0.26
SSBP4-215ENST00000625926 PHKA1P46020 1223 aa13.42□□□□□ -0.26
SSBP4-215ENST00000625926 G3BP1Q13283 466 aaKnown RBP eCLIP13.42□□□□□ -0.26
SSBP4-215ENST00000625926 ANKRD13AQ8IZ07 590 aa13.42□□□□□ -0.26
SSBP4-215ENST00000625926 TEPSINQ96N21 525 aa13.42□□□□□ -0.26
SSBP4-215ENST00000625926 TMEM39BQ9GZU3 492 aa13.42□□□□□ -0.26
SSBP4-215ENST00000625926 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.42□□□□□ -0.26
SSBP4-215ENST00000625926 PNMA6EA0A0J9YXQ4 647 aa13.41□□□□□ -0.26
SSBP4-215ENST00000625926 A0A1B0GUL7 405 aa13.41□□□□□ -0.26
SSBP4-215ENST00000625926 LDHBP07195 334 aaKnown RBP13.41□□□□□ -0.26
SSBP4-215ENST00000625926 ZBTB48P10074 688 aaPredicted RBP13.41□□□□□ -0.26
SSBP4-215ENST00000625926 CACNB3P54284 484 aa13.41□□□□□ -0.26
SSBP4-215ENST00000625926 INHBEP58166 350 aa13.41□□□□□ -0.26
SSBP4-215ENST00000625926 FKBP1CQ5VVH2 108 aa13.41□□□□□ -0.26
SSBP4-215ENST00000625926 FAM83AQ86UY5 434 aa13.41□□□□□ -0.26
SSBP4-215ENST00000625926 ZGPATQ8N5A5 531 aaKnown RBP13.41□□□□□ -0.26
SSBP4-215ENST00000625926 XAGE2Q96GT9 111 aa13.41□□□□□ -0.26
SSBP4-215ENST00000625926 CLMNQ96JQ2 1002 aa13.41□□□□□ -0.26
SSBP4-215ENST00000625926 NEUROD6Q96NK8 337 aa13.41□□□□□ -0.26
SSBP4-215ENST00000625926 SALL1Q9NSC2 1324 aa13.4□□□□□ -0.26
SSBP4-215ENST00000625926 MANSC4A6NHS7 340 aaPredicted RBP13.4□□□□□ -0.26
SSBP4-215ENST00000625926 PRDX5P30044 214 aa13.4□□□□□ -0.26
SSBP4-215ENST00000625926 ATP8B2P98198 1209 aa13.4□□□□□ -0.26
SSBP4-215ENST00000625926 DGKZQ13574 1117 aa13.4□□□□□ -0.26
SSBP4-215ENST00000625926 MVPQ14764 893 aaKnown RBP13.4□□□□□ -0.26
SSBP4-215ENST00000625926 ITPRIPQ8IWB1 547 aa13.4□□□□□ -0.26
SSBP4-215ENST00000625926 ZNF646O15015 1829 aaPredicted RBP13.4□□□□□ -0.26
SSBP4-215ENST00000625926 SSC5DA1L4H1 1573 aa13.4□□□□□ -0.26
SSBP4-215ENST00000625926 ZBTB7BO15156 539 aaPredicted RBP13.39□□□□□ -0.27
SSBP4-215ENST00000625926 TBC1D8O95759 1140 aa13.39□□□□□ -0.27
SSBP4-215ENST00000625926 ALDH1A1P00352 501 aa13.39□□□□□ -0.27
SSBP4-215ENST00000625926 MAP3K9P80192 1104 aa13.39□□□□□ -0.27
SSBP4-215ENST00000625926 RASGRF1Q13972 1273 aa13.39□□□□□ -0.27
SSBP4-215ENST00000625926 POLA2Q14181 598 aa13.39□□□□□ -0.27
SSBP4-215ENST00000625926 DIXDC1Q155Q3 683 aa13.39□□□□□ -0.27
SSBP4-215ENST00000625926 GORABQ5T7V8 394 aa13.39□□□□□ -0.27
SSBP4-215ENST00000625926 CDAN1Q8IWY9 1227 aa13.39□□□□□ -0.27
SSBP4-215ENST00000625926 HOOK2Q96ED9 719 aa13.39□□□□□ -0.27
SSBP4-215ENST00000625926 WNK4Q96J92 1243 aa13.39□□□□□ -0.27
SSBP4-215ENST00000625926 MCOLN1Q9GZU1 580 aa13.39□□□□□ -0.27
SSBP4-215ENST00000625926 DAGLAQ9Y4D2 1042 aa13.39□□□□□ -0.27
SSBP4-215ENST00000625926 PDS5AQ29RF7 1337 aaKnown RBP13.39□□□□□ -0.27
SSBP4-215ENST00000625926 RLBP1P12271 317 aa13.38□□□□□ -0.27
SSBP4-215ENST00000625926 SPTY2D1Q68D10 685 aaPredicted RBP13.38□□□□□ -0.27
SSBP4-215ENST00000625926 SSH3Q8TE77 659 aa13.38□□□□□ -0.27
SSBP4-215ENST00000625926 ELP3Q9H9T3 547 aa13.38□□□□□ -0.27
SSBP4-215ENST00000625926 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.38□□□□□ -0.27
SSBP4-215ENST00000625926 CCDC85CA6NKD9 419 aa13.37□□□□□ -0.27
SSBP4-215ENST00000625926 MS4A1P11836 297 aa13.37□□□□□ -0.27
SSBP4-215ENST00000625926 OS9Q13438 667 aaPredicted RBP13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms