RNA–Protein interactions for RNA: ENST00000618972.4

NEB-220, Transcript of nebulin, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NEB, Length 26,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEB-220ENST00000618972 CCDC61Q9Y6R9 512 aa3.48□□□□□ -1.85
NEB-220ENST00000618972 HSF2BPO75031 334 aa3.48□□□□□ -1.85
NEB-220ENST00000618972 PDLIM2Q96JY6 352 aa3.48□□□□□ -1.85
NEB-220ENST00000618972 MORC2Q9Y6X9 1032 aaPredicted RBP3.48□□□□□ -1.85
NEB-220ENST00000618972 RPGRIP1LQ68CZ1 1315 aa3.48□□□□□ -1.85
NEB-220ENST00000618972 INTS4Q96HW7 963 aaKnown RBP3.48□□□□□ -1.85
NEB-220ENST00000618972 SLC3A2P08195 630 aaKnown RBP3.48□□□□□ -1.85
NEB-220ENST00000618972 ABTB2Q8N961 1025 aa3.48□□□□□ -1.85
NEB-220ENST00000618972 IQCDQ96DY2 449 aa3.48□□□□□ -1.85
NEB-220ENST00000618972 HARSP12081 509 aaKnown RBP3.48□□□□□ -1.85
NEB-220ENST00000618972 RBM6P78332 1123 aaKnown RBP3.48□□□□□ -1.85
NEB-220ENST00000618972 DYNC1I2Q13409 638 aaKnown RBP3.48□□□□□ -1.85
NEB-220ENST00000618972 ANKRD13CQ8N6S4 541 aa3.48□□□□□ -1.85
NEB-220ENST00000618972 NRDE2Q9H7Z3 1164 aa3.48□□□□□ -1.85
NEB-220ENST00000618972 MED4Q9NPJ6 270 aa3.48□□□□□ -1.85
NEB-220ENST00000618972 GMNNO75496 209 aa3.48□□□□□ -1.85
NEB-220ENST00000618972 MAGEA9P43362 315 aa3.48□□□□□ -1.85
NEB-220ENST00000618972 TMC6Q7Z403 805 aa3.48□□□□□ -1.85
NEB-220ENST00000618972 JRKLQ9Y4A0 524 aa3.48□□□□□ -1.85
NEB-220ENST00000618972 ATP5DP30049 168 aa3.48□□□□□ -1.85
NEB-220ENST00000618972 BICC1Q9H694 974 aaKnown RBP3.48□□□□□ -1.85
NEB-220ENST00000618972 AKAP2Q9Y2D5 859 aa3.48□□□□□ -1.85
NEB-220ENST00000618972 E7ENQ6 273 aa3.48□□□□□ -1.85
NEB-220ENST00000618972 NDUFA13Q9P0J0 144 aa3.48□□□□□ -1.85
NEB-220ENST00000618972 CETN1Q12798 172 aa3.48□□□□□ -1.85
NEB-220ENST00000618972 AMOTQ4VCS5 1084 aa3.48□□□□□ -1.85
NEB-220ENST00000618972 DNAAF5Q86Y56 855 aa3.48□□□□□ -1.85
NEB-220ENST00000618972 TRMT44Q8IYL2 757 aaKnown RBP3.48□□□□□ -1.85
NEB-220ENST00000618972 TBC1D31Q96DN5 1066 aa3.48□□□□□ -1.85
NEB-220ENST00000618972 NUP62CLQ9H1M0 184 aa3.48□□□□□ -1.85
NEB-220ENST00000618972 STRN4Q9NRL3 753 aa3.48□□□□□ -1.85
NEB-220ENST00000618972 NDUFA8P51970 172 aa3.48□□□□□ -1.85
NEB-220ENST00000618972 ZNF131P52739 623 aa3.48□□□□□ -1.85
NEB-220ENST00000618972 TRPC3Q13507 836 aa3.48□□□□□ -1.85
NEB-220ENST00000618972 HDGFL1Q5TGJ6 251 aa3.48□□□□□ -1.85
NEB-220ENST00000618972 NCAPGQ9BPX3 1015 aa3.48□□□□□ -1.85
NEB-220ENST00000618972 FSD1Q9BTV5 496 aa3.48□□□□□ -1.85
NEB-220ENST00000618972 DDX23Q9BUQ8 820 aaKnown RBP3.48□□□□□ -1.85
NEB-220ENST00000618972 SRGAP2O75044 1071 aa3.48□□□□□ -1.85
NEB-220ENST00000618972 TRIM21P19474 475 aaKnown RBP3.48□□□□□ -1.85
NEB-220ENST00000618972 GUCY1A2P33402 732 aa3.48□□□□□ -1.85
NEB-220ENST00000618972 EP400NLQ6ZTU2 488 aa3.48□□□□□ -1.85
NEB-220ENST00000618972 PCDHA7Q9UN72 937 aa3.48□□□□□ -1.85
NEB-220ENST00000618972 CFAP58Q5T655 872 aa3.48□□□□□ -1.85
NEB-220ENST00000618972 PI4K2BQ8TCG2 481 aa3.48□□□□□ -1.85
NEB-220ENST00000618972 YY1P25490 414 aa3.47□□□□□ -1.85
NEB-220ENST00000618972 PHLDB3Q6NSJ2 640 aa3.47□□□□□ -1.85
NEB-220ENST00000618972 OXER1Q8TDS5 423 aa3.47□□□□□ -1.85
NEB-220ENST00000618972 NUP58Q9BVL2 599 aa3.47□□□□□ -1.85
NEB-220ENST00000618972 CSB-PGBD3P0DP91 1061 aa3.47□□□□□ -1.85
NEB-220ENST00000618972 EPS15P42566 896 aa3.47□□□□□ -1.85
NEB-220ENST00000618972 CCT4P50991 539 aaKnown RBP3.47□□□□□ -1.85
NEB-220ENST00000618972 WHAMMQ8TF30 809 aa3.47□□□□□ -1.85
NEB-220ENST00000618972 ORAI2Q96SN7 254 aa3.47□□□□□ -1.85
NEB-220ENST00000618972 TSPYL2Q9H2G4 693 aaPredicted RBP3.47□□□□□ -1.85
NEB-220ENST00000618972 CLSTN2Q9H4D0 955 aa3.47□□□□□ -1.85
NEB-220ENST00000618972 SERTAD1Q9UHV2 236 aa3.47□□□□□ -1.85
NEB-220ENST00000618972 TPX2Q9ULW0 747 aaKnown RBP3.47□□□□□ -1.85
NEB-220ENST00000618972 NESP48681 1621 aa3.47□□□□□ -1.85
NEB-220ENST00000618972 ENO4A6NNW6 628 aa3.47□□□□□ -1.85
NEB-220ENST00000618972 SATB1Q01826 763 aa3.47□□□□□ -1.85
NEB-220ENST00000618972 EVX2Q03828 476 aa3.47□□□□□ -1.85
NEB-220ENST00000618972 ANKRD13AQ8IZ07 590 aa3.47□□□□□ -1.85
NEB-220ENST00000618972 FBF1Q8TES7 1133 aa3.47□□□□□ -1.85
NEB-220ENST00000618972 BHMTQ93088 406 aa3.47□□□□□ -1.85
NEB-220ENST00000618972 SEPT11Q9NVA2 429 aaKnown RBP3.47□□□□□ -1.85
NEB-220ENST00000618972 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP3.47□□□□□ -1.85
NEB-220ENST00000618972 ARHGAP24Q8N264 748 aa3.47□□□□□ -1.85
NEB-220ENST00000618972 RAB3IL1Q8TBN0 382 aa3.47□□□□□ -1.85
NEB-220ENST00000618972 RNASELQ05823 741 aaKnown RBP3.47□□□□□ -1.85
NEB-220ENST00000618972 TRADDQ15628 312 aa3.47□□□□□ -1.85
NEB-220ENST00000618972 EXOC8Q8IYI6 725 aa3.47□□□□□ -1.85
NEB-220ENST00000618972 AXIN2Q9Y2T1 843 aa3.47□□□□□ -1.85
NEB-220ENST00000618972 RHOXF2BP0C7M4 288 aa3.47□□□□□ -1.85
NEB-220ENST00000618972 RHOXF2Q9BQY4 288 aa3.47□□□□□ -1.85
NEB-220ENST00000618972 CCDC18Q5T9S5 1454 aa3.47□□□□□ -1.85
NEB-220ENST00000618972 ARHGAP29Q52LW3 1261 aa3.47□□□□□ -1.85
NEB-220ENST00000618972 ALS2CLQ60I27 953 aa3.47□□□□□ -1.85
NEB-220ENST00000618972 BLOC1S2Q6QNY1 142 aa3.47□□□□□ -1.85
NEB-220ENST00000618972 CCDC65Q8IXS2 484 aa3.47□□□□□ -1.85
NEB-220ENST00000618972 GOLGA5Q8TBA6 731 aa3.47□□□□□ -1.85
NEB-220ENST00000618972 CTNNBL1Q8WYA6 563 aaPredicted RBP3.47□□□□□ -1.85
NEB-220ENST00000618972 TTC21BQ7Z4L5 1316 aa3.47□□□□□ -1.85
NEB-220ENST00000618972 ATP2A1O14983 1001 aa3.47□□□□□ -1.85
NEB-220ENST00000618972 FANCCQ00597 558 aa3.47□□□□□ -1.85
NEB-220ENST00000618972 WHAMMP3Q1A5X7 153 aa3.47□□□□□ -1.85
NEB-220ENST00000618972 DHX40Q8IX18 779 aaKnown RBP3.47□□□□□ -1.85
NEB-220ENST00000618972 AMOTL1Q8IY63 956 aa3.47□□□□□ -1.85
NEB-220ENST00000618972 CCDC170Q8IYT3 715 aa3.47□□□□□ -1.85
NEB-220ENST00000618972 RRP36Q96EU6 259 aaKnown RBP3.47□□□□□ -1.85
NEB-220ENST00000618972 ZKSCAN3Q9BRR0 538 aa3.47□□□□□ -1.85
NEB-220ENST00000618972 CASKIN1Q8WXD9 1431 aa3.47□□□□□ -1.85
NEB-220ENST00000618972 MAP3K21Q5TCX8 1036 aa3.47□□□□□ -1.85
NEB-220ENST00000618972 RAB3IPQ96QF0 476 aaPredicted RBP3.47□□□□□ -1.85
NEB-220ENST00000618972 FUCA2Q9BTY2 467 aa3.47□□□□□ -1.85
NEB-220ENST00000618972 IL16Q14005 1332 aa3.47□□□□□ -1.85
NEB-220ENST00000618972 CKAP4Q07065 602 aaKnown RBP3.47□□□□□ -1.85
NEB-220ENST00000618972 TBC1D10BQ4KMP7 808 aaPredicted RBP3.47□□□□□ -1.85
NEB-220ENST00000618972 CCDC121Q6ZUS5 278 aa3.47□□□□□ -1.85
NEB-220ENST00000618972 EFCAB13Q8IY85 973 aa3.47□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms