RNA–Protein interactions for RNA: ENST00000617310.4

SMARCA1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

TSL 2

Gene SMARCA1, Length 4,291 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-205ENST00000617310 MROH5Q6ZUA9 1318 aa11.62□□□□□ -0.55
SMARCA1-205ENST00000617310 BACH1O14867 736 aa11.62□□□□□ -0.55
SMARCA1-205ENST00000617310 SLC27A2O14975 620 aa11.62□□□□□ -0.55
SMARCA1-205ENST00000617310 TBCAO75347 108 aaKnown RBP11.62□□□□□ -0.55
SMARCA1-205ENST00000617310 PARP1P09874 1014 aaKnown RBP11.62□□□□□ -0.55
SMARCA1-205ENST00000617310 SLC1A4P43007 532 aa11.62□□□□□ -0.55
SMARCA1-205ENST00000617310 ARHGAP29Q52LW3 1261 aa11.62□□□□□ -0.55
SMARCA1-205ENST00000617310 KIAA1328Q86T90 577 aa11.62□□□□□ -0.55
SMARCA1-205ENST00000617310 SSH3Q8TE77 659 aa11.62□□□□□ -0.55
SMARCA1-205ENST00000617310 TMX1Q9H3N1 280 aa11.62□□□□□ -0.55
SMARCA1-205ENST00000617310 DACT1Q9NYF0 836 aa11.62□□□□□ -0.55
SMARCA1-205ENST00000617310 MAP3K4Q9Y6R4 1608 aa11.62□□□□□ -0.55
SMARCA1-205ENST00000617310 PATL2C9JE40 543 aaKnown RBP11.61□□□□□ -0.55
SMARCA1-205ENST00000617310 RAD17O75943 681 aa11.61□□□□□ -0.55
SMARCA1-205ENST00000617310 SFPQP23246 707 aaKnown RBP eCLIP11.61□□□□□ -0.55
SMARCA1-205ENST00000617310 HSPA1LP34931 641 aa11.61□□□□□ -0.55
SMARCA1-205ENST00000617310 TFAP4Q01664 338 aa11.61□□□□□ -0.55
SMARCA1-205ENST00000617310 LUC7LQ9NQ29 371 aaKnown RBP11.61□□□□□ -0.55
SMARCA1-205ENST00000617310 RTL1A6NKG5 1358 aa11.61□□□□□ -0.55
SMARCA1-205ENST00000617310 AATKQ6ZMQ8 1374 aa11.61□□□□□ -0.55
SMARCA1-205ENST00000617310 H7C1D1 291 aa11.61□□□□□ -0.55
SMARCA1-205ENST00000617310 GPS2Q13227 327 aa11.61□□□□□ -0.55
SMARCA1-205ENST00000617310 AKNAD1Q5T1N1 836 aa11.61□□□□□ -0.55
SMARCA1-205ENST00000617310 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.61□□□□□ -0.55
SMARCA1-205ENST00000617310 RUFY3Q7L099 469 aa11.61□□□□□ -0.55
SMARCA1-205ENST00000617310 CMTR1Q8N1G2 835 aaKnown RBP11.61□□□□□ -0.55
SMARCA1-205ENST00000617310 FLAD1Q8NFF5 587 aa11.61□□□□□ -0.55
SMARCA1-205ENST00000617310 HELLSQ9NRZ9 838 aa11.61□□□□□ -0.55
SMARCA1-205ENST00000617310 PALLDQ8WX93 1383 aa11.61□□□□□ -0.55
SMARCA1-205ENST00000617310 STAT6P42226 847 aa11.61□□□□□ -0.55
SMARCA1-205ENST00000617310 HLFQ16534 295 aa11.61□□□□□ -0.55
SMARCA1-205ENST00000617310 USH1GQ495M9 461 aa11.61□□□□□ -0.55
SMARCA1-205ENST00000617310 DDX19AQ9NUU7 478 aaKnown RBP11.61□□□□□ -0.55
SMARCA1-205ENST00000617310 A0A0D9SFI3 127 aa11.6□□□□□ -0.55
SMARCA1-205ENST00000617310 ASIC1P78348 528 aa11.6□□□□□ -0.55
SMARCA1-205ENST00000617310 FKBP15Q5T1M5 1219 aa11.6□□□□□ -0.55
SMARCA1-205ENST00000617310 JAKMIP3Q5VZ66 844 aa11.6□□□□□ -0.55
SMARCA1-205ENST00000617310 CHMP2AO43633 222 aa11.6□□□□□ -0.55
SMARCA1-205ENST00000617310 TMEM87AQ8NBN3 555 aa11.6□□□□□ -0.55
SMARCA1-205ENST00000617310 TEKT1Q969V4 418 aa11.6□□□□□ -0.55
SMARCA1-205ENST00000617310 TRIM47Q96LD4 638 aa11.6□□□□□ -0.55
SMARCA1-205ENST00000617310 PUF60Q9UHX1 559 aaKnown RBP11.6□□□□□ -0.55
SMARCA1-205ENST00000617310 ABCA9Q8IUA7 1624 aa11.6□□□□□ -0.55
SMARCA1-205ENST00000617310 PDE6AP16499 860 aa11.6□□□□□ -0.55
SMARCA1-205ENST00000617310 ZNF174Q15697 407 aa11.6□□□□□ -0.55
SMARCA1-205ENST00000617310 ZSCAN16Q9H4T2 348 aaPredicted RBP11.6□□□□□ -0.55
SMARCA1-205ENST00000617310 ABCC4O15439 1325 aa11.6□□□□□ -0.55
SMARCA1-205ENST00000617310 PDE8BO95263 885 aa11.6□□□□□ -0.55
SMARCA1-205ENST00000617310 TOP1P11387 765 aaKnown RBP11.6□□□□□ -0.55
SMARCA1-205ENST00000617310 USP48Q86UV5 1035 aa11.6□□□□□ -0.55
SMARCA1-205ENST00000617310 NLRP10Q86W26 655 aa11.6□□□□□ -0.55
SMARCA1-205ENST00000617310 IL27Q8NEV9 243 aa11.6□□□□□ -0.55
SMARCA1-205ENST00000617310 CNKSR1Q969H4 720 aa11.6□□□□□ -0.55
SMARCA1-205ENST00000617310 ANGEL1Q9UNK9 670 aaKnown RBP11.6□□□□□ -0.55
SMARCA1-205ENST00000617310 TRMT1Q9NXH9 659 aaKnown RBP11.59□□□□□ -0.55
SMARCA1-205ENST00000617310 CLIP2Q9UDT6 1046 aa11.59□□□□□ -0.55
SMARCA1-205ENST00000617310 KDRP35968 1356 aa11.59□□□□□ -0.55
SMARCA1-205ENST00000617310 F13A1P00488 732 aa11.59□□□□□ -0.55
SMARCA1-205ENST00000617310 CA8P35219 290 aa11.59□□□□□ -0.55
SMARCA1-205ENST00000617310 STX17P56962 302 aa11.59□□□□□ -0.55
SMARCA1-205ENST00000617310 DBNLQ9UJU6 430 aaKnown RBP11.59□□□□□ -0.55
SMARCA1-205ENST00000617310 ZNF804BA4D1E1 1349 aa11.59□□□□□ -0.55
SMARCA1-205ENST00000617310 PSDA5PKW4 1024 aaPredicted RBP11.59□□□□□ -0.55
SMARCA1-205ENST00000617310 SPTLC2O15270 562 aa11.59□□□□□ -0.55
SMARCA1-205ENST00000617310 SYT1P21579 422 aa11.59□□□□□ -0.55
SMARCA1-205ENST00000617310 UBE2HP62256 183 aa11.59□□□□□ -0.55
SMARCA1-205ENST00000617310 AMPD3Q01432 767 aa11.59□□□□□ -0.55
SMARCA1-205ENST00000617310 NUP88Q99567 741 aaPredicted RBP11.59□□□□□ -0.55
SMARCA1-205ENST00000617310 SNX14Q9Y5W7 946 aa11.59□□□□□ -0.55
SMARCA1-205ENST00000617310 RAD50Q92878 1312 aa11.59□□□□□ -0.55
SMARCA1-205ENST00000617310 PLXNC1O60486 1568 aa11.58□□□□□ -0.56
SMARCA1-205ENST00000617310 ANKARQ7Z5J8 1434 aa11.58□□□□□ -0.56
SMARCA1-205ENST00000617310 ATP5JP18859 108 aa11.58□□□□□ -0.56
SMARCA1-205ENST00000617310 RRAGBQ5VZM2 374 aa11.58□□□□□ -0.56
SMARCA1-205ENST00000617310 ERMNQ8TAM6 284 aa11.58□□□□□ -0.56
SMARCA1-205ENST00000617310 MYOM2P54296 1465 aa11.58□□□□□ -0.56
SMARCA1-205ENST00000617310 VWA3AA6NCI4 1184 aa11.58□□□□□ -0.56
SMARCA1-205ENST00000617310 CALML3P27482 149 aa11.58□□□□□ -0.56
SMARCA1-205ENST00000617310 CERKQ8TCT0 537 aa11.58□□□□□ -0.56
SMARCA1-205ENST00000617310 TBC1D22AQ8WUA7 517 aa11.58□□□□□ -0.56
SMARCA1-205ENST00000617310 ANTXR1Q9H6X2 564 aa11.58□□□□□ -0.56
SMARCA1-205ENST00000617310 RTL9Q8NET4 1388 aa11.58□□□□□ -0.56
SMARCA1-205ENST00000617310 SUSD4Q5VX71 490 aa11.58□□□□□ -0.56
SMARCA1-205ENST00000617310 SUPT20HQ8NEM7 779 aa11.58□□□□□ -0.56
SMARCA1-205ENST00000617310 MRPS27Q92552 414 aaKnown RBP11.58□□□□□ -0.56
SMARCA1-205ENST00000617310 FAM212AQ96EL1 285 aa11.58□□□□□ -0.56
SMARCA1-205ENST00000617310 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP11.58□□□□□ -0.563e-7■■□□□ 12.2
SMARCA1-205ENST00000617310 EXOC1Q9NV70 894 aa11.58□□□□□ -0.56
SMARCA1-205ENST00000617310 ATP7BP35670 1465 aa11.58□□□□□ -0.56
SMARCA1-205ENST00000617310 SPDYE4A6NLX3 237 aa11.57□□□□□ -0.56
SMARCA1-205ENST00000617310 CFBP00751 764 aa11.57□□□□□ -0.56
SMARCA1-205ENST00000617310 MYCLP12524 364 aaPredicted RBP11.57□□□□□ -0.56
SMARCA1-205ENST00000617310 GNA11P29992 359 aa11.57□□□□□ -0.56
SMARCA1-205ENST00000617310 ATG3Q9NT62 314 aa11.57□□□□□ -0.56
SMARCA1-205ENST00000617310 ERBB4Q15303 1308 aa11.57□□□□□ -0.56
SMARCA1-205ENST00000617310 JAK2O60674 1132 aa11.57□□□□□ -0.56
SMARCA1-205ENST00000617310 RPS6KB1P23443 525 aa11.57□□□□□ -0.56
SMARCA1-205ENST00000617310 EN1Q05925 392 aaPredicted RBP11.57□□□□□ -0.56
SMARCA1-205ENST00000617310 SPECC1Q5M775 1068 aa11.57□□□□□ -0.56
SMARCA1-205ENST00000617310 KRT79Q5XKE5 535 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms