RNA–Protein interactions for RNA: ENST00000614616.4

CHD1-212, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CHD1, Length 8,095 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-212ENST00000614616 SPAG5Q96R06 1193 aa15.42■□□□□ 0.06
CHD1-212ENST00000614616 DDX21Q9NR30 783 aaKnown RBP eCLIP15.42■□□□□ 0.06
CHD1-212ENST00000614616 PPP1R9AQ9ULJ8 1098 aa15.42■□□□□ 0.06
CHD1-212ENST00000614616 TMEM63CQ9P1W3 806 aa15.42■□□□□ 0.06
CHD1-212ENST00000614616 NSD2O96028 1365 aa15.42■□□□□ 0.06
CHD1-212ENST00000614616 EVA1CP58658 441 aa15.42■□□□□ 0.06
CHD1-212ENST00000614616 DIXDC1Q155Q3 683 aa15.42■□□□□ 0.06
CHD1-212ENST00000614616 NUP58Q9BVL2 599 aa15.42■□□□□ 0.06
CHD1-212ENST00000614616 SLC12A5Q9H2X9 1139 aa15.42■□□□□ 0.06
CHD1-212ENST00000614616 CEP126Q9P2H0 1117 aa15.42■□□□□ 0.06
CHD1-212ENST00000614616 SAR1BQ9Y6B6 198 aa15.42■□□□□ 0.06
CHD1-212ENST00000614616 TDRD9Q8NDG6 1382 aaKnown RBP15.42■□□□□ 0.06
CHD1-212ENST00000614616 TTC21AQ8NDW8 1320 aa15.42■□□□□ 0.06
CHD1-212ENST00000614616 MARCKSP29966 332 aaPredicted RBP15.42■□□□□ 0.06
CHD1-212ENST00000614616 ARMC9Q7Z3E5 817 aa15.42■□□□□ 0.06
CHD1-212ENST00000614616 NCOA7Q8NI08 942 aa15.42■□□□□ 0.06
CHD1-212ENST00000614616 NOX5Q96PH1 765 aa15.42■□□□□ 0.06
CHD1-212ENST00000614616 ECHDC1Q9NTX5 307 aa15.42■□□□□ 0.06
CHD1-212ENST00000614616 IFIT3O14879 490 aaKnown RBP15.42■□□□□ 0.06
CHD1-212ENST00000614616 PSME1Q06323 249 aa15.42■□□□□ 0.06
CHD1-212ENST00000614616 KLHL14Q9P2G3 628 aa15.41■□□□□ 0.06
CHD1-212ENST00000614616 KIF1BO60333 1816 aa15.41■□□□□ 0.06
CHD1-212ENST00000614616 NBPF7P0C2Y1 421 aaPredicted RBP15.41■□□□□ 0.06
CHD1-212ENST00000614616 TMED1Q13445 227 aa15.41■□□□□ 0.06
CHD1-212ENST00000614616 CCDC144CPQ8IYA2 1237 aa15.41■□□□□ 0.06
CHD1-212ENST00000614616 CREB3O43889 395 aa15.41■□□□□ 0.06
CHD1-212ENST00000614616 IFT88Q13099 833 aa15.41■□□□□ 0.06
CHD1-212ENST00000614616 SEPT2Q15019 361 aa15.41■□□□□ 0.06
CHD1-212ENST00000614616 PDE1AP54750 535 aa15.41■□□□□ 0.06
CHD1-212ENST00000614616 Q6ZUG5 572 aa15.41■□□□□ 0.06
CHD1-212ENST00000614616 SDCCAG8Q86SQ7 713 aaPredicted RBP15.41■□□□□ 0.06
CHD1-212ENST00000614616 ZRANB1Q9UGI0 708 aa15.41■□□□□ 0.06
CHD1-212ENST00000614616 GAPVD1Q14C86 1478 aa15.41■□□□□ 0.06
CHD1-212ENST00000614616 APBA1Q02410 837 aa15.41■□□□□ 0.06
CHD1-212ENST00000614616 EVI5O60447 810 aa15.41■□□□□ 0.06
CHD1-212ENST00000614616 TMEM67Q5HYA8 995 aa15.41■□□□□ 0.06
CHD1-212ENST00000614616 FERMT2Q96AC1 680 aa15.4■□□□□ 0.06
CHD1-212ENST00000614616 SAMD1Q6SPF0 538 aaPredicted RBP15.4■□□□□ 0.06
CHD1-212ENST00000614616 ALG1Q9BT22 464 aa15.4■□□□□ 0.06
CHD1-212ENST00000614616 PARP2Q9UGN5 583 aa15.4■□□□□ 0.06
CHD1-212ENST00000614616 RNF40O75150 1001 aa15.4■□□□□ 0.06
CHD1-212ENST00000614616 GMNNO75496 209 aa15.4■□□□□ 0.06
CHD1-212ENST00000614616 TNIP1Q15025 636 aa15.4■□□□□ 0.06
CHD1-212ENST00000614616 DDX41Q9UJV9 622 aaKnown RBP15.4■□□□□ 0.06
CHD1-212ENST00000614616 BTBD11A6QL63 1104 aa15.4■□□□□ 0.06
CHD1-212ENST00000614616 AMOTQ4VCS5 1084 aa15.4■□□□□ 0.06
CHD1-212ENST00000614616 ATP2B2Q01814 1243 aa15.4■□□□□ 0.06
CHD1-212ENST00000614616 DYNC1I2Q13409 638 aaKnown RBP15.4■□□□□ 0.06
CHD1-212ENST00000614616 RAB17Q9H0T7 212 aa15.4■□□□□ 0.06
CHD1-212ENST00000614616 MMRN2Q9H8L6 949 aa15.4■□□□□ 0.06
CHD1-212ENST00000614616 SEL1L2Q5TEA6 688 aa15.39■□□□□ 0.05
CHD1-212ENST00000614616 NCAPGQ9BPX3 1015 aa15.39■□□□□ 0.05
CHD1-212ENST00000614616 SYNRGQ9UMZ2 1314 aa15.39■□□□□ 0.05
CHD1-212ENST00000614616 KLHDC4Q8TBB5 520 aa15.39■□□□□ 0.05
CHD1-212ENST00000614616 GEMIN8Q9NWZ8 242 aaKnown RBP15.39■□□□□ 0.05
CHD1-212ENST00000614616 MYH9P35579 1960 aaKnown RBP15.39■□□□□ 0.05
CHD1-212ENST00000614616 CCT6AP40227 531 aaKnown RBP15.39■□□□□ 0.05
CHD1-212ENST00000614616 PDCD2Q16342 344 aaPredicted RBP15.39■□□□□ 0.05
CHD1-212ENST00000614616 SLC26A6Q9BXS9 759 aa15.39■□□□□ 0.05
CHD1-212ENST00000614616 CHUKO15111 745 aa15.39■□□□□ 0.05
CHD1-212ENST00000614616 ZNF644Q9H582 1327 aaPredicted RBP15.39■□□□□ 0.05
CHD1-212ENST00000614616 NLRP12P59046 1061 aa15.39■□□□□ 0.05
CHD1-212ENST00000614616 SECISBP2LQ93073 1101 aaKnown RBP15.39■□□□□ 0.05
CHD1-212ENST00000614616 CCDC152Q4G0S7 254 aa15.39■□□□□ 0.05
CHD1-212ENST00000614616 EIF3CLB5ME19 914 aaKnown RBP15.39■□□□□ 0.05
CHD1-212ENST00000614616 ATP1A2P50993 1020 aa15.39■□□□□ 0.05
CHD1-212ENST00000614616 EIF3CQ99613 913 aaKnown RBP15.39■□□□□ 0.05
CHD1-212ENST00000614616 BICC1Q9H694 974 aaKnown RBP15.39■□□□□ 0.05
CHD1-212ENST00000614616 GNAT3A8MTJ3 354 aa15.38■□□□□ 0.05
CHD1-212ENST00000614616 IDH1O75874 414 aaKnown RBP15.38■□□□□ 0.05
CHD1-212ENST00000614616 NBPF9Q3BBW0 867 aa15.38■□□□□ 0.05
CHD1-212ENST00000614616 SMC1BQ8NDV3 1235 aa15.38■□□□□ 0.05
CHD1-212ENST00000614616 CCHCR1Q8TD31 782 aa15.38■□□□□ 0.05
CHD1-212ENST00000614616 YY1AP1Q9H869 796 aa15.38■□□□□ 0.05
CHD1-212ENST00000614616 LRP2BPQ9P2M1 347 aa15.38■□□□□ 0.05
CHD1-212ENST00000614616 PSDA5PKW4 1024 aaPredicted RBP15.38■□□□□ 0.05
CHD1-212ENST00000614616 RNF123Q5XPI4 1314 aa15.38■□□□□ 0.05
CHD1-212ENST00000614616 PPP1R13BQ96KQ4 1090 aa15.38■□□□□ 0.05
CHD1-212ENST00000614616 I3L4J1 428 aa15.38■□□□□ 0.05
CHD1-212ENST00000614616 IFIT1P09914 478 aaKnown RBP15.38■□□□□ 0.05
CHD1-212ENST00000614616 SND1Q7KZF4 910 aaKnown RBP eCLIP15.38■□□□□ 0.05
CHD1-212ENST00000614616 MORC4Q8TE76 937 aa15.38■□□□□ 0.05
CHD1-212ENST00000614616 BICD1Q96G01 975 aa15.38■□□□□ 0.05
CHD1-212ENST00000614616 ABTB1Q969K4 478 aaPredicted RBP15.38■□□□□ 0.05
CHD1-212ENST00000614616 CTTNBP2NLQ9P2B4 639 aa15.38■□□□□ 0.05
CHD1-212ENST00000614616 PARD3Q8TEW0 1356 aa15.37■□□□□ 0.05
CHD1-212ENST00000614616 CCDC151A5D8V7 595 aa15.37■□□□□ 0.05
CHD1-212ENST00000614616 TTC36A6NLP5 189 aa15.37■□□□□ 0.05
CHD1-212ENST00000614616 MYL6BP14649 208 aa15.37■□□□□ 0.05
CHD1-212ENST00000614616 MICU3Q86XE3 530 aa15.37■□□□□ 0.05
CHD1-212ENST00000614616 CSRNP2Q9H175 543 aa15.37■□□□□ 0.05
CHD1-212ENST00000614616 RBM8AQ9Y5S9 174 aaKnown RBP15.37■□□□□ 0.05
CHD1-212ENST00000614616 NDC80O14777 642 aa15.37■□□□□ 0.05
CHD1-212ENST00000614616 SESN3P58005 492 aa15.37■□□□□ 0.05
CHD1-212ENST00000614616 BRF1Q92994 677 aa15.37■□□□□ 0.05
CHD1-212ENST00000614616 RGS16O15492 202 aaPredicted RBP15.37■□□□□ 0.05
CHD1-212ENST00000614616 UBL4BQ8N7F7 174 aa15.37■□□□□ 0.05
CHD1-212ENST00000614616 GPT2Q8TD30 523 aa15.37■□□□□ 0.05
CHD1-212ENST00000614616 LLPHQ9BRT6 129 aaKnown RBP15.37■□□□□ 0.05
CHD1-212ENST00000614616 SLC24A3Q9HC58 644 aa15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms