RNA–Protein interactions for RNA: ENST00000614237.1

SENP3-EIF4A1-201, Transcript of SENP3-EIF4A1 readthrough (NMD candidate), humanhuman

APPRIS P1 TSL 2 BASIC

Gene SENP3-EIF4A1, Length 3,519 nt, Biotype nonsense mediated decay.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SENP3-EIF4A1-201ENST00000614237 LPIN2Q92539 896 aa12.69□□□□□ -0.38
SENP3-EIF4A1-201ENST00000614237 ZBTB1Q9Y2K1 713 aa12.69□□□□□ -0.38
SENP3-EIF4A1-201ENST00000614237 TCRBV5S4A2TA0A5A2 114 aa12.69□□□□□ -0.38
SENP3-EIF4A1-201ENST00000614237 KDM4AO75164 1064 aa12.69□□□□□ -0.38
SENP3-EIF4A1-201ENST00000614237 IMMTQ16891 758 aaKnown RBP12.69□□□□□ -0.38
SENP3-EIF4A1-201ENST00000614237 GREM2Q9H772 168 aa12.69□□□□□ -0.38
SENP3-EIF4A1-201ENST00000614237 NDUFB9Q9Y6M9 179 aa12.69□□□□□ -0.38
SENP3-EIF4A1-201ENST00000614237 CHD4Q14839 1912 aa12.69□□□□□ -0.38
SENP3-EIF4A1-201ENST00000614237 PRIMPOLQ96LW4 560 aa12.68□□□□□ -0.38
SENP3-EIF4A1-201ENST00000614237 CHGBP05060 677 aa12.68□□□□□ -0.38
SENP3-EIF4A1-201ENST00000614237 PUM3Q15397 648 aaKnown RBP12.68□□□□□ -0.38
SENP3-EIF4A1-201ENST00000614237 MYH14Q7Z406 1995 aaKnown RBP12.68□□□□□ -0.38
SENP3-EIF4A1-201ENST00000614237 MCAMP43121 646 aa12.68□□□□□ -0.38
SENP3-EIF4A1-201ENST00000614237 ARID5BQ14865 1188 aa12.68□□□□□ -0.38
SENP3-EIF4A1-201ENST00000614237 DZIP3Q86Y13 1208 aaKnown RBP12.68□□□□□ -0.38
SENP3-EIF4A1-201ENST00000614237 BRF1Q92994 677 aa12.68□□□□□ -0.38
SENP3-EIF4A1-201ENST00000614237 KCNF1Q9H3M0 494 aa12.68□□□□□ -0.38
SENP3-EIF4A1-201ENST00000614237 MYO5AQ9Y4I1 1855 aaKnown RBP12.68□□□□□ -0.38
SENP3-EIF4A1-201ENST00000614237 LDHAL6AQ6ZMR3 332 aa12.67□□□□□ -0.38
SENP3-EIF4A1-201ENST00000614237 BICD2Q8TD16 824 aa12.67□□□□□ -0.38
SENP3-EIF4A1-201ENST00000614237 CCDC87Q9NVE4 849 aa12.67□□□□□ -0.38
SENP3-EIF4A1-201ENST00000614237 CAMTA2O94983 1202 aa12.67□□□□□ -0.38
SENP3-EIF4A1-201ENST00000614237 FGAP02671 866 aa12.67□□□□□ -0.38
SENP3-EIF4A1-201ENST00000614237 ZAP70P43403 619 aa12.67□□□□□ -0.38
SENP3-EIF4A1-201ENST00000614237 SCARF1Q14162 830 aa12.67□□□□□ -0.38
SENP3-EIF4A1-201ENST00000614237 TMED8Q6PL24 325 aaPredicted RBP12.67□□□□□ -0.38
SENP3-EIF4A1-201ENST00000614237 CLEC4GQ6UXB4 293 aa12.67□□□□□ -0.38
SENP3-EIF4A1-201ENST00000614237 TMX1Q9H3N1 280 aa12.67□□□□□ -0.38
SENP3-EIF4A1-201ENST00000614237 METTL24Q5JXM2 366 aa12.67□□□□□ -0.38
SENP3-EIF4A1-201ENST00000614237 CCDC112Q8NEF3 446 aa12.67□□□□□ -0.38
SENP3-EIF4A1-201ENST00000614237 CLSTN2Q9H4D0 955 aa12.67□□□□□ -0.38
SENP3-EIF4A1-201ENST00000614237 ECM29Q5VYK3 1845 aa12.67□□□□□ -0.38
SENP3-EIF4A1-201ENST00000614237 DHX16O60231 1041 aaKnown RBP12.66□□□□□ -0.38
SENP3-EIF4A1-201ENST00000614237 SMARCC1Q92922 1105 aaPredicted RBP12.66□□□□□ -0.38
SENP3-EIF4A1-201ENST00000614237 GOLGA6L6A8MZA4 724 aa12.66□□□□□ -0.38
SENP3-EIF4A1-201ENST00000614237 GTF2E1P29083 439 aaPredicted RBP12.66□□□□□ -0.38
SENP3-EIF4A1-201ENST00000614237 TAF7LQ5H9L4 462 aa12.66□□□□□ -0.38
SENP3-EIF4A1-201ENST00000614237 NCOA7Q8NI08 942 aa12.66□□□□□ -0.38
SENP3-EIF4A1-201ENST00000614237 DDX11Q96FC9 970 aa12.66□□□□□ -0.38
SENP3-EIF4A1-201ENST00000614237 TRMT112Q9UI30 125 aaKnown RBP12.66□□□□□ -0.38
SENP3-EIF4A1-201ENST00000614237 CCDC192P0DO97 292 aa12.66□□□□□ -0.38
SENP3-EIF4A1-201ENST00000614237 FAM177A1Q8N128 213 aaPredicted RBP12.66□□□□□ -0.38
SENP3-EIF4A1-201ENST00000614237 SPATA32Q96LK8 384 aa12.66□□□□□ -0.38
SENP3-EIF4A1-201ENST00000614237 PUS7LQ9H0K6 701 aaKnown RBP12.66□□□□□ -0.38
SENP3-EIF4A1-201ENST00000614237 DLEC1Q9Y238 1755 aa12.66□□□□□ -0.38
SENP3-EIF4A1-201ENST00000614237 NHSQ6T4R5 1651 aa12.65□□□□□ -0.38
SENP3-EIF4A1-201ENST00000614237 THSD7AQ9UPZ6 1657 aa12.65□□□□□ -0.38
SENP3-EIF4A1-201ENST00000614237 POLR3GO15318 223 aaPredicted RBP12.65□□□□□ -0.38
SENP3-EIF4A1-201ENST00000614237 JAK2O60674 1132 aa12.65□□□□□ -0.38
SENP3-EIF4A1-201ENST00000614237 TPM3P06753 285 aa12.65□□□□□ -0.38
SENP3-EIF4A1-201ENST00000614237 SKIDA1Q1XH10 827 aa12.65□□□□□ -0.38
SENP3-EIF4A1-201ENST00000614237 PTPDC1A2A3K4 754 aa12.65□□□□□ -0.38
SENP3-EIF4A1-201ENST00000614237 CTAGE5O15320 804 aa12.65□□□□□ -0.38
SENP3-EIF4A1-201ENST00000614237 RCAN1P53805 252 aa12.65□□□□□ -0.38
SENP3-EIF4A1-201ENST00000614237 PNPLA7Q6ZV29 1317 aa12.65□□□□□ -0.38
SENP3-EIF4A1-201ENST00000614237 GPAA1O43292 621 aa12.65□□□□□ -0.39
SENP3-EIF4A1-201ENST00000614237 CCDC102BQ68D86 513 aa12.65□□□□□ -0.39
SENP3-EIF4A1-201ENST00000614237 ZNF396Q96N95 335 aaPredicted RBP12.65□□□□□ -0.39
SENP3-EIF4A1-201ENST00000614237 UTP14AQ9BVJ6 771 aaKnown RBP12.65□□□□□ -0.39
SENP3-EIF4A1-201ENST00000614237 HPS5Q9UPZ3 1129 aa12.65□□□□□ -0.39
SENP3-EIF4A1-201ENST00000614237 NTSR2O95665 410 aa12.64□□□□□ -0.39
SENP3-EIF4A1-201ENST00000614237 FDPSP14324 419 aaKnown RBP12.64□□□□□ -0.39
SENP3-EIF4A1-201ENST00000614237 FKBP4Q02790 459 aaKnown RBP eCLIP12.64□□□□□ -0.398e-8■■■□□ 18.8
SENP3-EIF4A1-201ENST00000614237 MAP3K11Q16584 847 aa12.64□□□□□ -0.39
SENP3-EIF4A1-201ENST00000614237 ANO6Q4KMQ2 910 aa12.64□□□□□ -0.39
SENP3-EIF4A1-201ENST00000614237 PGBD1Q96JS3 809 aa12.64□□□□□ -0.39
SENP3-EIF4A1-201ENST00000614237 DNAJC25Q9H1X3 360 aa12.64□□□□□ -0.39
SENP3-EIF4A1-201ENST00000614237 PDS5AQ29RF7 1337 aaKnown RBP12.64□□□□□ -0.39
SENP3-EIF4A1-201ENST00000614237 LIG1P18858 919 aa12.64□□□□□ -0.39
SENP3-EIF4A1-201ENST00000614237 ANTXR2P58335 489 aa12.64□□□□□ -0.39
SENP3-EIF4A1-201ENST00000614237 APOBRQ0VD83 1088 aa12.64□□□□□ -0.39
SENP3-EIF4A1-201ENST00000614237 NBPF3Q9H094 633 aa12.64□□□□□ -0.39
SENP3-EIF4A1-201ENST00000614237 NUP62CLQ9H1M0 184 aa12.64□□□□□ -0.39
SENP3-EIF4A1-201ENST00000614237 RTEL1Q9NZ71 1219 aa12.64□□□□□ -0.39
SENP3-EIF4A1-201ENST00000614237 MAST2Q6P0Q8 1798 aa12.64□□□□□ -0.39
SENP3-EIF4A1-201ENST00000614237 A0A1W2PQ27 194 aa12.63□□□□□ -0.39
SENP3-EIF4A1-201ENST00000614237 A0A1W2PQ64 194 aa12.63□□□□□ -0.39
SENP3-EIF4A1-201ENST00000614237 A0A1W2PQD8 194 aa12.63□□□□□ -0.39
SENP3-EIF4A1-201ENST00000614237 DDB1Q16531 1140 aa12.63□□□□□ -0.39
SENP3-EIF4A1-201ENST00000614237 SGMS1Q86VZ5 419 aa12.63□□□□□ -0.39
SENP3-EIF4A1-201ENST00000614237 TMEM87BQ96K49 555 aa12.63□□□□□ -0.39
SENP3-EIF4A1-201ENST00000614237 CNNM1Q9NRU3 951 aa12.63□□□□□ -0.39
SENP3-EIF4A1-201ENST00000614237 DACT1Q9NYF0 836 aa12.63□□□□□ -0.39
SENP3-EIF4A1-201ENST00000614237 LY75O60449 1722 aa12.63□□□□□ -0.39
SENP3-EIF4A1-201ENST00000614237 ZNF804BA4D1E1 1349 aa12.63□□□□□ -0.39
SENP3-EIF4A1-201ENST00000614237 ZNF213O14771 459 aa12.63□□□□□ -0.39
SENP3-EIF4A1-201ENST00000614237 GNAT2P19087 354 aa12.63□□□□□ -0.39
SENP3-EIF4A1-201ENST00000614237 SLC10A5Q5PT55 438 aa12.63□□□□□ -0.39
SENP3-EIF4A1-201ENST00000614237 SUSD4Q5VX71 490 aa12.63□□□□□ -0.39
SENP3-EIF4A1-201ENST00000614237 MARCH10Q8NA82 808 aaPredicted RBP12.63□□□□□ -0.39
SENP3-EIF4A1-201ENST00000614237 KIAA1524Q8TCG1 905 aa12.63□□□□□ -0.39
SENP3-EIF4A1-201ENST00000614237 GTPBP4Q9BZE4 634 aaKnown RBP12.63□□□□□ -0.39
SENP3-EIF4A1-201ENST00000614237 TNMDQ9H2S6 317 aa12.63□□□□□ -0.39
SENP3-EIF4A1-201ENST00000614237 SLC5A1P13866 664 aa12.63□□□□□ -0.39
SENP3-EIF4A1-201ENST00000614237 CRKLP46109 303 aaKnown RBP12.63□□□□□ -0.39
SENP3-EIF4A1-201ENST00000614237 NCBP1Q09161 790 aaKnown RBP12.63□□□□□ -0.39
SENP3-EIF4A1-201ENST00000614237 BRAPQ7Z569 592 aa12.63□□□□□ -0.39
SENP3-EIF4A1-201ENST00000614237 FAM200AQ8TCP9 573 aa12.63□□□□□ -0.39
SENP3-EIF4A1-201ENST00000614237 STRBPQ96SI9 672 aaKnown RBP12.63□□□□□ -0.39
SENP3-EIF4A1-201ENST00000614237 MORC2Q9Y6X9 1032 aaPredicted RBP12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms