RNA–Protein interactions for RNA: ENST00000613899.4

FAM228B-208, Transcript of family with sequence similarity 228 member B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene FAM228B, Length 1,238 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM228B-208ENST00000613899 AOX1Q06278 1338 aa28.31■■■□□ 2.12
FAM228B-208ENST00000613899 MAST3O60307 1309 aa28.3■■■□□ 2.12
FAM228B-208ENST00000613899 IL15P40933 162 aaPredicted RBP28.3■■■□□ 2.12
FAM228B-208ENST00000613899 FRAT1Q92837 279 aaPredicted RBP28.3■■■□□ 2.12
FAM228B-208ENST00000613899 ZNF70Q9UC06 446 aaPredicted RBP28.3■■■□□ 2.12
FAM228B-208ENST00000613899 SUGT1Q9Y2Z0 365 aa28.3■■■□□ 2.12
FAM228B-208ENST00000613899 TRPA1O75762 1119 aa28.29■■■□□ 2.12
FAM228B-208ENST00000613899 BCAR3O75815 825 aa28.29■■■□□ 2.12
FAM228B-208ENST00000613899 RASA3Q14644 834 aa28.29■■■□□ 2.12
FAM228B-208ENST00000613899 MAP3K11Q16584 847 aa28.29■■■□□ 2.12
FAM228B-208ENST00000613899 ATP2B3Q16720 1220 aa28.29■■■□□ 2.12
FAM228B-208ENST00000613899 LDLRAD1Q5T700 205 aa28.29■■■□□ 2.12
FAM228B-208ENST00000613899 COPRSQ9NQ92 184 aa28.29■■■□□ 2.12
FAM228B-208ENST00000613899 TEKT1Q969V4 418 aa28.28■■■□□ 2.12
FAM228B-208ENST00000613899 ABHD8Q96I13 439 aa28.28■■■□□ 2.12
FAM228B-208ENST00000613899 TDRD3Q9H7E2 651 aaKnown RBP28.28■■■□□ 2.12
FAM228B-208ENST00000613899 GRIK5Q16478 980 aa28.27■■■□□ 2.12
FAM228B-208ENST00000613899 PA2G4Q9UQ80 394 aaKnown RBP28.27■■■□□ 2.12
FAM228B-208ENST00000613899 UNCXA6NJT0 531 aa28.26■■■□□ 2.11
FAM228B-208ENST00000613899 TNNI2P48788 182 aa28.26■■■□□ 2.11
FAM228B-208ENST00000613899 MTX1Q13505 466 aa28.26■■■□□ 2.11
FAM228B-208ENST00000613899 WDR66Q8TBY9 1149 aa28.26■■■□□ 2.11
FAM228B-208ENST00000613899 SREBF2Q12772 1141 aa28.25■■■□□ 2.11
FAM228B-208ENST00000613899 NBPF12Q5TAG4 269 aaPredicted RBP28.25■■■□□ 2.11
FAM228B-208ENST00000613899 MRIQ9BWK5 157 aa28.25■■■□□ 2.11
FAM228B-208ENST00000613899 GNL3LQ9NVN8 582 aaKnown RBP28.25■■■□□ 2.11
FAM228B-208ENST00000613899 FZD1Q9UP38 647 aa28.25■■■□□ 2.11
FAM228B-208ENST00000613899 SRGAP3O43295 1099 aa28.24■■■□□ 2.11
FAM228B-208ENST00000613899 IREB2P48200 963 aaKnown RBP28.24■■■□□ 2.11
FAM228B-208ENST00000613899 ZDHHC15Q96MV8 337 aa28.24■■■□□ 2.11
FAM228B-208ENST00000613899 MKRN3Q13064 507 aaKnown RBP28.23■■■□□ 2.11
FAM228B-208ENST00000613899 SPRYD7Q5W111 196 aa28.23■■■□□ 2.11
FAM228B-208ENST00000613899 ZKSCAN2Q63HK3 967 aa28.23■■■□□ 2.11
FAM228B-208ENST00000613899 CLUAP1Q96AJ1 413 aa28.23■■■□□ 2.11
FAM228B-208ENST00000613899 LAMB1P07942 1786 aa28.23■■■□□ 2.11
FAM228B-208ENST00000613899 OTOFQ9HC10 1997 aa28.22■■■□□ 2.11
FAM228B-208ENST00000613899 TCP10L2B9ZVM9 353 aa28.22■■■□□ 2.11
FAM228B-208ENST00000613899 TM4SF4P48230 202 aa28.22■■■□□ 2.11
FAM228B-208ENST00000613899 SLC10A4Q96EP9 437 aa28.22■■■□□ 2.11
FAM228B-208ENST00000613899 TMOD2Q9NZR1 351 aa28.22■■■□□ 2.11
FAM228B-208ENST00000613899 TNNQ9UQP3 1299 aa28.22■■■□□ 2.11
FAM228B-208ENST00000613899 SEMA3EO15041 775 aa28.21■■■□□ 2.11
FAM228B-208ENST00000613899 GNAI2P04899 355 aa28.21■■■□□ 2.11
FAM228B-208ENST00000613899 MCOLN1Q9GZU1 580 aa28.21■■■□□ 2.11
FAM228B-208ENST00000613899 ZBED9Q6R2W3 1325 aa28.2■■■□□ 2.11
FAM228B-208ENST00000613899 ZBTB48P10074 688 aaPredicted RBP28.2■■■□□ 2.1
FAM228B-208ENST00000613899 DGKZQ13574 1117 aa28.2■■■□□ 2.1
FAM228B-208ENST00000613899 HHIPL2Q6UWX4 724 aa28.2■■■□□ 2.1
FAM228B-208ENST00000613899 ANKRD13AQ8IZ07 590 aa28.19■■■□□ 2.1
FAM228B-208ENST00000613899 CLMNQ96JQ2 1002 aa28.19■■■□□ 2.1
FAM228B-208ENST00000613899 TEPSINQ96N21 525 aa28.19■■■□□ 2.1
FAM228B-208ENST00000613899 TMEM39BQ9GZU3 492 aa28.19■■■□□ 2.1
FAM228B-208ENST00000613899 DENND2AQ9ULE3 1009 aa28.19■■■□□ 2.1
FAM228B-208ENST00000613899 ZBTB22O15209 634 aa28.18■■■□□ 2.1
FAM228B-208ENST00000613899 USP2O75604 605 aaPredicted RBP28.18■■■□□ 2.1
FAM228B-208ENST00000613899 WNK4Q96J92 1243 aa28.18■■■□□ 2.1
FAM228B-208ENST00000613899 AKAP2Q9Y2D5 859 aa28.18■■■□□ 2.1
FAM228B-208ENST00000613899 SALL1Q9NSC2 1324 aa28.18■■■□□ 2.1
FAM228B-208ENST00000613899 MANSC4A6NHS7 340 aaPredicted RBP28.17■■■□□ 2.1
FAM228B-208ENST00000613899 PHKA1P46020 1223 aa28.17■■■□□ 2.1
FAM228B-208ENST00000613899 FKBP1CQ5VVH2 108 aa28.17■■■□□ 2.1
FAM228B-208ENST00000613899 APOBEC3HQ6NTF7 200 aaKnown RBP28.17■■■□□ 2.1
FAM228B-208ENST00000613899 TMEM57Q8N5G2 664 aa28.17■■■□□ 2.1
FAM228B-208ENST00000613899 INHBEP58166 350 aa28.16■■■□□ 2.1
FAM228B-208ENST00000613899 CCDC102BQ68D86 513 aa28.16■■■□□ 2.1
FAM228B-208ENST00000613899 FAM83AQ86UY5 434 aa28.16■■■□□ 2.1
FAM228B-208ENST00000613899 ZBTB4Q9P1Z0 1013 aaPredicted RBP28.16■■■□□ 2.1
FAM228B-208ENST00000613899 ALDH1A1P00352 501 aa28.15■■■□□ 2.1
FAM228B-208ENST00000613899 LDHBP07195 334 aaKnown RBP28.15■■■□□ 2.1
FAM228B-208ENST00000613899 ADORA1P30542 326 aa28.15■■■□□ 2.1
FAM228B-208ENST00000613899 CACNB3P54284 484 aa28.15■■■□□ 2.1
FAM228B-208ENST00000613899 CDAN1Q8IWY9 1227 aa28.15■■■□□ 2.1
FAM228B-208ENST00000613899 FTSJ3Q8IY81 847 aaKnown RBP28.15■■■□□ 2.1
FAM228B-208ENST00000613899 ZGPATQ8N5A5 531 aaKnown RBP28.15■■■□□ 2.1
FAM228B-208ENST00000613899 RPAP1Q9BWH6 1393 aaPredicted RBP28.14■■■□□ 2.1
FAM228B-208ENST00000613899 A0A1B0GUL7 405 aa28.14■■■□□ 2.1
FAM228B-208ENST00000613899 PRDX5P30044 214 aa28.14■■■□□ 2.1
FAM228B-208ENST00000613899 TFCP2Q12800 502 aa28.14■■■□□ 2.1
FAM228B-208ENST00000613899 CFHR5Q9BXR6 569 aa28.14■■■□□ 2.1
FAM228B-208ENST00000613899 PDS5AQ29RF7 1337 aaKnown RBP28.14■■■□□ 2.09
FAM228B-208ENST00000613899 TBC1D8O95759 1140 aa28.13■■■□□ 2.09
FAM228B-208ENST00000613899 MVPQ14764 893 aaKnown RBP28.13■■■□□ 2.09
FAM228B-208ENST00000613899 NOM1Q5C9Z4 860 aaKnown RBP28.13■■■□□ 2.09
FAM228B-208ENST00000613899 HOOK2Q96ED9 719 aa28.13■■■□□ 2.09
FAM228B-208ENST00000613899 CCDC85CA6NKD9 419 aa28.12■■■□□ 2.09
FAM228B-208ENST00000613899 TIMM10P62072 90 aa28.12■■■□□ 2.09
FAM228B-208ENST00000613899 DAGLAQ9Y4D2 1042 aa28.12■■■□□ 2.09
FAM228B-208ENST00000613899 PNMA6EA0A0J9YXQ4 647 aa28.11■■■□□ 2.09
FAM228B-208ENST00000613899 DIXDC1Q155Q3 683 aa28.11■■■□□ 2.09
FAM228B-208ENST00000613899 CTU1Q7Z7A3 348 aaKnown RBP28.11■■■□□ 2.09
FAM228B-208ENST00000613899 XAGE2Q96GT9 111 aa28.11■■■□□ 2.09
FAM228B-208ENST00000613899 G3BP1Q13283 466 aaKnown RBP eCLIP28.1■■■□□ 2.09
FAM228B-208ENST00000613899 RASGRF1Q13972 1273 aa28.1■■■□□ 2.09
FAM228B-208ENST00000613899 IFNL1Q8IU54 200 aa28.1■■■□□ 2.09
FAM228B-208ENST00000613899 DDX55Q8NHQ9 600 aaKnown RBP eCLIP28.1■■■□□ 2.09
FAM228B-208ENST00000613899 ELP3Q9H9T3 547 aa28.1■■■□□ 2.09
FAM228B-208ENST00000613899 MYH2Q9UKX2 1941 aa28.1■■■□□ 2.09
FAM228B-208ENST00000613899 ZNF296Q8WUU4 475 aaPredicted RBP28.09■■■□□ 2.09
FAM228B-208ENST00000613899 CSADQ9Y600 493 aa28.09■■■□□ 2.09
FAM228B-208ENST00000613899 GPR25O00155 361 aa28.08■■■□□ 2.09
Retrieved 100 of 20,778 RNA–protein pairs in 86.6 ms