RNA–Protein interactions for RNA: ENST00000610726.4

CSDE1-218, Transcript of cold shock domain containing E1, humanhuman

TSL 5 BASIC

Gene CSDE1, Length 4,312 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-218ENST00000610726 CALM3P0DP25 149 aa8.36□□□□□ -1.07
CSDE1-218ENST00000610726 XRCC6P12956 609 aaKnown RBP eCLIP8.36□□□□□ -1.07
CSDE1-218ENST00000610726 CHMP4BP1P59074 171 aa8.36□□□□□ -1.07
CSDE1-218ENST00000610726 GTF2IP78347 998 aa8.36□□□□□ -1.07
CSDE1-218ENST00000610726 ME3Q16798 604 aa8.36□□□□□ -1.07
CSDE1-218ENST00000610726 TTC6Q86TZ1 520 aa8.36□□□□□ -1.07
CSDE1-218ENST00000610726 SDR42E1Q8WUS8 393 aa8.36□□□□□ -1.07
CSDE1-218ENST00000610726 TMEM87BQ96K49 555 aa8.36□□□□□ -1.07
CSDE1-218ENST00000610726 PTPRUQ92729 1446 aa8.36□□□□□ -1.07
CSDE1-218ENST00000610726 hCG_1642624A0A1W2PR95 340 aa8.36□□□□□ -1.07
CSDE1-218ENST00000610726 USP17L12C9JPN9 530 aa8.36□□□□□ -1.07
CSDE1-218ENST00000610726 USP17L21D6R901 530 aa8.36□□□□□ -1.07
CSDE1-218ENST00000610726 FGAP02671 866 aa8.36□□□□□ -1.07
CSDE1-218ENST00000610726 CCDC148Q8NFR7 591 aa8.36□□□□□ -1.07
CSDE1-218ENST00000610726 PTCH1Q13635 1447 aa8.36□□□□□ -1.07
CSDE1-218ENST00000610726 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.35□□□□□ -1.07
CSDE1-218ENST00000610726 SNAP23O00161 211 aa8.35□□□□□ -1.07
CSDE1-218ENST00000610726 TNIP1Q15025 636 aa8.35□□□□□ -1.07
CSDE1-218ENST00000610726 ADCK5Q3MIX3 580 aa8.35□□□□□ -1.07
CSDE1-218ENST00000610726 ANO6Q4KMQ2 910 aa8.35□□□□□ -1.07
CSDE1-218ENST00000610726 SEPT12Q8IYM1 358 aa8.35□□□□□ -1.07
CSDE1-218ENST00000610726 CALML4Q96GE6 196 aa8.35□□□□□ -1.07
CSDE1-218ENST00000610726 DSCC1Q9BVC3 393 aa8.35□□□□□ -1.07
CSDE1-218ENST00000610726 DNAJC25Q9H1X3 360 aa8.35□□□□□ -1.07
CSDE1-218ENST00000610726 V9GY48 417 aaPredicted RBP8.35□□□□□ -1.07
CSDE1-218ENST00000610726 MFSD14BQ5SR56 506 aa8.35□□□□□ -1.07
CSDE1-218ENST00000610726 TGFBRAP1Q8WUH2 860 aa8.35□□□□□ -1.07
CSDE1-218ENST00000610726 PDCL3Q9H2J4 239 aa8.35□□□□□ -1.07
CSDE1-218ENST00000610726 RTL9Q8NET4 1388 aa8.35□□□□□ -1.07
CSDE1-218ENST00000610726 MED14O60244 1454 aa8.35□□□□□ -1.07
CSDE1-218ENST00000610726 DIP2BQ9P265 1576 aa8.35□□□□□ -1.07
CSDE1-218ENST00000610726 KCNQ2O43526 872 aa8.35□□□□□ -1.07
CSDE1-218ENST00000610726 TOP1P11387 765 aaKnown RBP8.35□□□□□ -1.07
CSDE1-218ENST00000610726 TCP10Q12799 353 aa8.35□□□□□ -1.07
CSDE1-218ENST00000610726 PKP1Q13835 747 aa8.35□□□□□ -1.07
CSDE1-218ENST00000610726 ERFEQ4G0M1 354 aa8.35□□□□□ -1.07
CSDE1-218ENST00000610726 ZNF589Q86UQ0 364 aaPredicted RBP8.35□□□□□ -1.07
CSDE1-218ENST00000610726 TM6SF1Q9BZW5 370 aa8.35□□□□□ -1.07
CSDE1-218ENST00000610726 A0A1B0GVL5 298 aa8.35□□□□□ -1.07
CSDE1-218ENST00000610726 CCP110O43303 1012 aa8.35□□□□□ -1.07
CSDE1-218ENST00000610726 CD2BP2O95400 341 aaKnown RBP8.35□□□□□ -1.07
CSDE1-218ENST00000610726 TNNI2P48788 182 aa8.35□□□□□ -1.07
CSDE1-218ENST00000610726 POLA2Q14181 598 aa8.35□□□□□ -1.07
CSDE1-218ENST00000610726 SYCP1Q15431 976 aa8.35□□□□□ -1.07
CSDE1-218ENST00000610726 ODF2Q5BJF6 829 aa8.35□□□□□ -1.07
CSDE1-218ENST00000610726 SUSD4Q5VX71 490 aa8.35□□□□□ -1.07
CSDE1-218ENST00000610726 PALLDQ8WX93 1383 aa8.34□□□□□ -1.07
CSDE1-218ENST00000610726 FAM47AQ5JRC9 791 aa8.34□□□□□ -1.07
CSDE1-218ENST00000610726 VSIG10Q8N0Z9 540 aa8.34□□□□□ -1.07
CSDE1-218ENST00000610726 LARGE2Q8N3Y3 721 aa8.34□□□□□ -1.07
CSDE1-218ENST00000610726 TTLL11Q8NHH1 800 aa8.34□□□□□ -1.07
CSDE1-218ENST00000610726 DHX58Q96C10 678 aa8.34□□□□□ -1.07
CSDE1-218ENST00000610726 CHAMP1Q96JM3 812 aa8.34□□□□□ -1.07
CSDE1-218ENST00000610726 FBXO3Q9UK99 471 aa8.34□□□□□ -1.07
CSDE1-218ENST00000610726 SAMM50Q9Y512 469 aa8.34□□□□□ -1.07
CSDE1-218ENST00000610726 PATL2C9JE40 543 aaKnown RBP8.34□□□□□ -1.07
CSDE1-218ENST00000610726 EPB41L2O43491 1005 aaKnown RBP8.34□□□□□ -1.07
CSDE1-218ENST00000610726 MCM7P33993 719 aa8.34□□□□□ -1.07
CSDE1-218ENST00000610726 ENOX2Q16206 610 aaKnown RBP8.34□□□□□ -1.07
CSDE1-218ENST00000610726 AKNAD1Q5T1N1 836 aa8.34□□□□□ -1.07
CSDE1-218ENST00000610726 CDC37L1Q7L3B6 337 aa8.34□□□□□ -1.07
CSDE1-218ENST00000610726 CCDC112Q8NEF3 446 aa8.34□□□□□ -1.07
CSDE1-218ENST00000610726 LSG1Q9H089 658 aaKnown RBP8.34□□□□□ -1.07
CSDE1-218ENST00000610726 H7C1W4 665 aa8.34□□□□□ -1.07
CSDE1-218ENST00000610726 CALML3P27482 149 aa8.34□□□□□ -1.07
CSDE1-218ENST00000610726 KRT27Q7Z3Y8 459 aa8.34□□□□□ -1.07
CSDE1-218ENST00000610726 IFNL3Q8IZI9 196 aa8.34□□□□□ -1.07
CSDE1-218ENST00000610726 RRP36Q96EU6 259 aaKnown RBP8.34□□□□□ -1.07
CSDE1-218ENST00000610726 GPCPD1Q9NPB8 672 aa8.34□□□□□ -1.07
CSDE1-218ENST00000610726 TRMT1Q9NXH9 659 aaKnown RBP8.34□□□□□ -1.07
CSDE1-218ENST00000610726 TPCN1Q9ULQ1 816 aa8.34□□□□□ -1.07
CSDE1-218ENST00000610726 GJA3Q9Y6H8 435 aa8.34□□□□□ -1.07
CSDE1-218ENST00000610726 TMC6Q7Z403 805 aa8.33□□□□□ -1.08
CSDE1-218ENST00000610726 BRAPQ7Z569 592 aa8.33□□□□□ -1.08
CSDE1-218ENST00000610726 MAP4K1Q92918 833 aa8.33□□□□□ -1.08
CSDE1-218ENST00000610726 C6orf50Q9HD87 102 aa8.33□□□□□ -1.08
CSDE1-218ENST00000610726 SEPT11Q9NVA2 429 aaKnown RBP8.33□□□□□ -1.08
CSDE1-218ENST00000610726 OVOS2A0A0J9YW53 1432 aa8.33□□□□□ -1.08
CSDE1-218ENST00000610726 OVOS2Q6IE36 1432 aa8.33□□□□□ -1.08
CSDE1-218ENST00000610726 ADGRB1O14514 1584 aa8.33□□□□□ -1.08
CSDE1-218ENST00000610726 NBPF26B4DH59 902 aa8.33□□□□□ -1.08
CSDE1-218ENST00000610726 CIAO1O76071 339 aa8.33□□□□□ -1.08
CSDE1-218ENST00000610726 BMP15O95972 392 aa8.33□□□□□ -1.08
CSDE1-218ENST00000610726 ADD1P35611 737 aaKnown RBP8.33□□□□□ -1.08
CSDE1-218ENST00000610726 KRT2P35908 639 aa8.33□□□□□ -1.08
CSDE1-218ENST00000610726 MATR3P43243 847 aaKnown RBP eCLIP8.33□□□□□ -1.08
CSDE1-218ENST00000610726 RBM10P98175 930 aaKnown RBP8.33□□□□□ -1.08
CSDE1-218ENST00000610726 TFAP4Q01664 338 aa8.33□□□□□ -1.08
CSDE1-218ENST00000610726 GPS2Q13227 327 aa8.33□□□□□ -1.08
CSDE1-218ENST00000610726 DOK7Q18PE1 504 aa8.33□□□□□ -1.08
CSDE1-218ENST00000610726 ARHGAP29Q52LW3 1261 aa8.33□□□□□ -1.08
CSDE1-218ENST00000610726 KANK3Q6NY19 840 aa8.33□□□□□ -1.08
CSDE1-218ENST00000610726 NBPF10Q6P3W6 841 aaKnown RBP8.33□□□□□ -1.08
CSDE1-218ENST00000610726 CMTR1Q8N1G2 835 aaKnown RBP8.33□□□□□ -1.08
CSDE1-218ENST00000610726 NBPF15Q8N660 670 aa8.33□□□□□ -1.08
CSDE1-218ENST00000610726 FAM200AQ8TCP9 573 aa8.33□□□□□ -1.08
CSDE1-218ENST00000610726 ZNF830Q96NB3 372 aaPredicted RBP8.33□□□□□ -1.08
CSDE1-218ENST00000610726 PLIN2Q99541 437 aa8.33□□□□□ -1.08
CSDE1-218ENST00000610726 ARGLU1Q9NWB6 273 aaPredicted RBP8.33□□□□□ -1.08
CSDE1-218ENST00000610726 MYO3AQ8NEV4 1616 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 277.1 ms