RNA–Protein interactions for RNA: ENST00000602716.5

PPFIA3-207, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 1 (best)

Gene PPFIA3, Length 2,020 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-207ENST00000602716 KCNQ5Q9NR82 932 aa20.77■□□□□ 0.91
PPFIA3-207ENST00000602716 SNX14Q9Y5W7 946 aa20.77■□□□□ 0.91
PPFIA3-207ENST00000602716 SALL1Q9NSC2 1324 aa20.76■□□□□ 0.91
PPFIA3-207ENST00000602716 CYP7A1P22680 504 aa20.76■□□□□ 0.91
PPFIA3-207ENST00000602716 LCORLQ8N3X6 602 aa20.76■□□□□ 0.91
PPFIA3-207ENST00000602716 EYA3Q99504 573 aa20.76■□□□□ 0.91
PPFIA3-207ENST00000602716 MXD3Q9BW11 206 aa20.76■□□□□ 0.91
PPFIA3-207ENST00000602716 ARMT1Q9H993 441 aa20.76■□□□□ 0.91
PPFIA3-207ENST00000602716 SPON1Q9HCB6 807 aa20.76■□□□□ 0.91
PPFIA3-207ENST00000602716 EPB41L2O43491 1005 aaKnown RBP20.75■□□□□ 0.91
PPFIA3-207ENST00000602716 PRKCSHP14314 528 aaPredicted RBP20.75■□□□□ 0.91
PPFIA3-207ENST00000602716 GTF2IP78347 998 aa20.75■□□□□ 0.91
PPFIA3-207ENST00000602716 CREB3L3Q68CJ9 461 aa20.75■□□□□ 0.91
PPFIA3-207ENST00000602716 CC2D2BQ6DHV5 1058 aa20.75■□□□□ 0.91
PPFIA3-207ENST00000602716 WDR66Q8TBY9 1149 aa20.75■□□□□ 0.91
PPFIA3-207ENST00000602716 SLC27A2O14975 620 aa20.74■□□□□ 0.91
PPFIA3-207ENST00000602716 MCCP23508 829 aa20.74■□□□□ 0.91
PPFIA3-207ENST00000602716 DALRD3Q5D0E6 543 aaKnown RBP20.74■□□□□ 0.91
PPFIA3-207ENST00000602716 TTLL5Q6EMB2 1281 aa20.74■□□□□ 0.91
PPFIA3-207ENST00000602716 CERS5Q8N5B7 392 aa20.74■□□□□ 0.91
PPFIA3-207ENST00000602716 FBXW7Q969H0 707 aa20.74■□□□□ 0.91
PPFIA3-207ENST00000602716 DYNLL1P63167 89 aaKnown RBP20.73■□□□□ 0.91
PPFIA3-207ENST00000602716 KIAA2012Q0VF49 1180 aa20.73■□□□□ 0.91
PPFIA3-207ENST00000602716 DIXDC1Q155Q3 683 aa20.73■□□□□ 0.91
PPFIA3-207ENST00000602716 MFSD14BQ5SR56 506 aa20.73■□□□□ 0.91
PPFIA3-207ENST00000602716 NAA16Q6N069 864 aaPredicted RBP20.73■□□□□ 0.91
PPFIA3-207ENST00000602716 STRBPQ96SI9 672 aaKnown RBP20.73■□□□□ 0.91
PPFIA3-207ENST00000602716 DSCC1Q9BVC3 393 aa20.73■□□□□ 0.91
PPFIA3-207ENST00000602716 ZNF277Q9NRM2 450 aaPredicted RBP20.73■□□□□ 0.91
PPFIA3-207ENST00000602716 FAM205AQ6ZU69 1335 aa20.73■□□□□ 0.91
PPFIA3-207ENST00000602716 PRKAB2O43741 272 aa20.73■□□□□ 0.91
PPFIA3-207ENST00000602716 ECE2O60344 883 aa20.73■□□□□ 0.91
PPFIA3-207ENST00000602716 ADCK5Q3MIX3 580 aa20.73■□□□□ 0.91
PPFIA3-207ENST00000602716 AIDAQ96BJ3 306 aa20.73■□□□□ 0.91
PPFIA3-207ENST00000602716 EPB41L4AQ9HCS5 686 aaPredicted RBP20.73■□□□□ 0.91
PPFIA3-207ENST00000602716 SCN9AQ15858 1988 aa20.73■□□□□ 0.91
PPFIA3-207ENST00000602716 SRCAPQ6ZRS2 3230 aa20.73■□□□□ 0.91
PPFIA3-207ENST00000602716 ZNF646O15015 1829 aaPredicted RBP20.72■□□□□ 0.91
PPFIA3-207ENST00000602716 PPIP5K2O43314 1243 aa20.72■□□□□ 0.91
PPFIA3-207ENST00000602716 KCNB2Q92953 911 aa20.72■□□□□ 0.91
PPFIA3-207ENST00000602716 IL17RAQ96F46 866 aa20.72■□□□□ 0.91
PPFIA3-207ENST00000602716 RIOK1Q9BRS2 568 aaKnown RBP20.72■□□□□ 0.91
PPFIA3-207ENST00000602716 UPF3BQ9BZI7 483 aaKnown RBP20.72■□□□□ 0.91
PPFIA3-207ENST00000602716 BCS1LQ9Y276 419 aa20.72■□□□□ 0.91
PPFIA3-207ENST00000602716 LDHBP07195 334 aaKnown RBP20.71■□□□□ 0.91
PPFIA3-207ENST00000602716 DZIP1Q86YF9 867 aaKnown RBP20.71■□□□□ 0.91
PPFIA3-207ENST00000602716 SPRYD3Q8NCJ5 442 aa20.71■□□□□ 0.91
PPFIA3-207ENST00000602716 YDJCA8MPS7 323 aa20.71■□□□□ 0.91
PPFIA3-207ENST00000602716 CYP21A2P08686 494 aa20.71■□□□□ 0.91
PPFIA3-207ENST00000602716 CPA1P15085 419 aa20.71■□□□□ 0.91
PPFIA3-207ENST00000602716 ANAPC15P60006 121 aa20.71■□□□□ 0.91
PPFIA3-207ENST00000602716 PSMD1Q99460 953 aa20.71■□□□□ 0.91
PPFIA3-207ENST00000602716 CHMP5Q9NZZ3 219 aa20.71■□□□□ 0.91
PPFIA3-207ENST00000602716 RABEP1Q15276 862 aa20.7■□□□□ 0.9
PPFIA3-207ENST00000602716 HSCBQ8IWL3 235 aa20.7■□□□□ 0.9
PPFIA3-207ENST00000602716 RTKN2Q8IZC4 609 aa20.7■□□□□ 0.9
PPFIA3-207ENST00000602716 FHDC1Q9C0D6 1143 aaPredicted RBP20.7■□□□□ 0.9
PPFIA3-207ENST00000602716 RTN4Q9NQC3 1192 aaKnown RBP20.7■□□□□ 0.9
PPFIA3-207ENST00000602716 U3KPZ7 1027 aaPredicted RBP20.7■□□□□ 0.9
PPFIA3-207ENST00000602716 NFKBIEO00221 500 aa20.7■□□□□ 0.9
PPFIA3-207ENST00000602716 ZGPATQ8N5A5 531 aaKnown RBP20.7■□□□□ 0.9
PPFIA3-207ENST00000602716 G3V3G9 751 aa20.69■□□□□ 0.9
PPFIA3-207ENST00000602716 DCAF8Q5TAQ9 597 aa20.69■□□□□ 0.9
PPFIA3-207ENST00000602716 STOX1Q6ZVD7 989 aa20.69■□□□□ 0.9
PPFIA3-207ENST00000602716 SNX21Q969T3 373 aa20.69■□□□□ 0.9
PPFIA3-207ENST00000602716 MAGEB6P1A0A0J9YX57 407 aa20.68■□□□□ 0.9
PPFIA3-207ENST00000602716 FGAP02671 866 aa20.68■□□□□ 0.9
PPFIA3-207ENST00000602716 SPTY2D1Q68D10 685 aaPredicted RBP20.68■□□□□ 0.9
PPFIA3-207ENST00000602716 SUPT20HQ8NEM7 779 aa20.68■□□□□ 0.9
PPFIA3-207ENST00000602716 AATFQ9NY61 560 aaKnown RBP eCLIP20.68■□□□□ 0.9
PPFIA3-207ENST00000602716 ADAMTSL1Q8N6G6 1762 aa20.68■□□□□ 0.9
PPFIA3-207ENST00000602716 RPAP1Q9BWH6 1393 aaPredicted RBP20.68■□□□□ 0.9
PPFIA3-207ENST00000602716 F8W031 263 aaPredicted RBP20.68■□□□□ 0.9
PPFIA3-207ENST00000602716 HAND2P61296 217 aa20.68■□□□□ 0.9
PPFIA3-207ENST00000602716 PODNQ7Z5L7 613 aa20.68■□□□□ 0.9
PPFIA3-207ENST00000602716 SDR42E1Q8WUS8 393 aa20.68■□□□□ 0.9
PPFIA3-207ENST00000602716 GSG1L2A8MUP6 293 aa20.67■□□□□ 0.9
PPFIA3-207ENST00000602716 MCM4P33991 863 aa20.67■□□□□ 0.9
PPFIA3-207ENST00000602716 JAKMIP1Q96N16 626 aaKnown RBP20.67■□□□□ 0.9
PPFIA3-207ENST00000602716 RASSF7Q02833 373 aa20.66■□□□□ 0.9
PPFIA3-207ENST00000602716 TBC1D22AQ8WUA7 517 aa20.66■□□□□ 0.9
PPFIA3-207ENST00000602716 SLC4A4Q9Y6R1 1079 aa20.66■□□□□ 0.9
PPFIA3-207ENST00000602716 FER1L6Q2WGJ9 1857 aa20.66■□□□□ 0.9
PPFIA3-207ENST00000602716 DACT2Q5SW24 774 aa20.66■□□□□ 0.9
PPFIA3-207ENST00000602716 NBPF3Q9H094 633 aa20.66■□□□□ 0.9
PPFIA3-207ENST00000602716 MROH7-TTC4A0A0A0MT08 1334 aa20.65■□□□□ 0.9
PPFIA3-207ENST00000602716 CCDC88AQ3V6T2 1871 aa20.65■□□□□ 0.9
PPFIA3-207ENST00000602716 SMIM22K7EJ46 135 aa20.65■□□□□ 0.9
PPFIA3-207ENST00000602716 APPP05067 770 aa20.65■□□□□ 0.9
PPFIA3-207ENST00000602716 DDIT3P35638 169 aa20.65■□□□□ 0.9
PPFIA3-207ENST00000602716 PRELPP51888 382 aa20.65■□□□□ 0.9
PPFIA3-207ENST00000602716 NEK4P51957 841 aa20.65■□□□□ 0.9
PPFIA3-207ENST00000602716 SOGA3Q5TF21 947 aa20.65■□□□□ 0.9
PPFIA3-207ENST00000602716 LARGE2Q8N3Y3 721 aa20.65■□□□□ 0.9
PPFIA3-207ENST00000602716 CASTP20810 708 aaKnown RBP20.65■□□□□ 0.9
PPFIA3-207ENST00000602716 GRIPAP1Q4V328 841 aa20.65■□□□□ 0.9
PPFIA3-207ENST00000602716 TAOK3Q9H2K8 898 aa20.65■□□□□ 0.9
PPFIA3-207ENST00000602716 ZKSCAN1P17029 563 aaPredicted RBP20.64■□□□□ 0.89
PPFIA3-207ENST00000602716 RNF20Q5VTR2 975 aa20.64■□□□□ 0.89
PPFIA3-207ENST00000602716 IFNL3Q8IZI9 196 aa20.64■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms