RNA–Protein interactions for RNA: ENST00000602272.5

FARP1-241, Transcript of FERM, ARH/RhoGEF and pleckstrin domain protein 1, humanhuman

TSL 5

Gene FARP1, Length 784 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FARP1-241ENST00000602272 ARHGEF10O15013 1369 aa9.45□□□□□ -0.9
FARP1-241ENST00000602272 SSH2Q76I76 1423 aa9.45□□□□□ -0.9
FARP1-241ENST00000602272 K7ELQ4 463 aaPredicted RBP9.44□□□□□ -0.9
FARP1-241ENST00000602272 CD33P20138 364 aa9.44□□□□□ -0.9
FARP1-241ENST00000602272 ZEB1P37275 1124 aaPredicted RBP9.44□□□□□ -0.9
FARP1-241ENST00000602272 ZNF468Q5VIY5 522 aaPredicted RBP9.44□□□□□ -0.9
FARP1-241ENST00000602272 CHSY3Q70JA7 882 aa9.44□□□□□ -0.9
FARP1-241ENST00000602272 TMC1Q8TDI8 760 aa9.44□□□□□ -0.9
FARP1-241ENST00000602272 ZDHHC1Q8WTX9 485 aa9.44□□□□□ -0.9
FARP1-241ENST00000602272 SLC12A5Q9H2X9 1139 aa9.44□□□□□ -0.9
FARP1-241ENST00000602272 MARK1Q9P0L2 795 aa9.44□□□□□ -0.9
FARP1-241ENST00000602272 CXXC1Q9P0U4 656 aaPredicted RBP9.44□□□□□ -0.9
FARP1-241ENST00000602272 A0A1W2PP64 1363 aa9.44□□□□□ -0.9
FARP1-241ENST00000602272 USP54Q70EL1 1684 aa9.44□□□□□ -0.9
FARP1-241ENST00000602272 KTN1Q86UP2 1357 aaKnown RBP9.43□□□□□ -0.9
FARP1-241ENST00000602272 ANKRD36BQ8N2N9 1353 aa9.43□□□□□ -0.9
FARP1-241ENST00000602272 PPP1R12BO60237 982 aaPredicted RBP9.43□□□□□ -0.9
FARP1-241ENST00000602272 ATP2B4P23634 1241 aa9.43□□□□□ -0.9
FARP1-241ENST00000602272 BAG6P46379 1132 aa9.43□□□□□ -0.9
FARP1-241ENST00000602272 TEAD4Q15561 434 aa9.43□□□□□ -0.9
FARP1-241ENST00000602272 PHLDB3Q6NSJ2 640 aa9.43□□□□□ -0.9
FARP1-241ENST00000602272 POTEAQ6S8J7 498 aa9.43□□□□□ -0.9
FARP1-241ENST00000602272 TRAIPQ9BWF2 469 aa9.43□□□□□ -0.9
FARP1-241ENST00000602272 NEUROD4Q9HD90 331 aa9.43□□□□□ -0.9
FARP1-241ENST00000602272 EDC4Q6P2E9 1401 aaKnown RBP9.42□□□□□ -0.9
FARP1-241ENST00000602272 SSFA2P28290 1259 aa9.42□□□□□ -0.9
FARP1-241ENST00000602272 PSMA6P60900 246 aaKnown RBP9.42□□□□□ -0.9
FARP1-241ENST00000602272 SH3PXD2AQ5TCZ1 1133 aa9.42□□□□□ -0.9
FARP1-241ENST00000602272 HDGFL2Q7Z4V5 671 aaPredicted RBP9.42□□□□□ -0.9
FARP1-241ENST00000602272 STAG2Q8N3U4 1231 aa9.42□□□□□ -0.9
FARP1-241ENST00000602272 SUV39H2Q9H5I1 410 aa9.42□□□□□ -0.9
FARP1-241ENST00000602272 TERF2IPQ9NYB0 399 aa9.42□□□□□ -0.9
FARP1-241ENST00000602272 TTC21BQ7Z4L5 1316 aa9.41□□□□□ -0.9
FARP1-241ENST00000602272 TTC21AQ8NDW8 1320 aa9.41□□□□□ -0.9
FARP1-241ENST00000602272 EML1O00423 815 aa9.41□□□□□ -0.9
FARP1-241ENST00000602272 NOS2P35228 1153 aa9.41□□□□□ -0.9
FARP1-241ENST00000602272 FKBP5Q13451 457 aaPredicted RBP9.41□□□□□ -0.9
FARP1-241ENST00000602272 C2orf49Q9BVC5 232 aaPredicted RBP9.41□□□□□ -0.9
FARP1-241ENST00000602272 PARP3Q9Y6F1 533 aa9.41□□□□□ -0.9
FARP1-241ENST00000602272 SLIT3O75094 1523 aa9.41□□□□□ -0.9
FARP1-241ENST00000602272 KIF20BQ96Q89 1820 aa9.4□□□□□ -0.9
FARP1-241ENST00000602272 KIF7Q2M1P5 1343 aa9.4□□□□□ -0.9
FARP1-241ENST00000602272 EFSO43281 561 aa9.4□□□□□ -0.9
FARP1-241ENST00000602272 ALAS2P22557 587 aa9.4□□□□□ -0.9
FARP1-241ENST00000602272 FCHSD1Q86WN1 690 aa9.4□□□□□ -0.9
FARP1-241ENST00000602272 KLF15Q9UIH9 416 aa9.4□□□□□ -0.9
FARP1-241ENST00000602272 PLCH1Q4KWH8 1693 aa9.39□□□□□ -0.91
FARP1-241ENST00000602272 USP19O94966 1318 aa9.39□□□□□ -0.91
FARP1-241ENST00000602272 SERTM1A2A2V5 107 aa9.39□□□□□ -0.91
FARP1-241ENST00000602272 PDIA4P13667 645 aaKnown RBP9.39□□□□□ -0.91
FARP1-241ENST00000602272 HIRAP54198 1017 aaPredicted RBP9.39□□□□□ -0.91
FARP1-241ENST00000602272 ABTB2Q8N961 1025 aa9.39□□□□□ -0.91
FARP1-241ENST00000602272 POLR3GLQ9BT43 218 aa9.39□□□□□ -0.91
FARP1-241ENST00000602272 ZNF232Q9UNY5 417 aa9.39□□□□□ -0.91
FARP1-241ENST00000602272 CHMP3Q9Y3E7 222 aa9.39□□□□□ -0.91
FARP1-241ENST00000602272 CCDC7Q96M83 1385 aa9.38□□□□□ -0.91
FARP1-241ENST00000602272 COL14A1Q05707 1796 aaKnown RBP9.38□□□□□ -0.91
FARP1-241ENST00000602272 SPDYE3A6NKU9 549 aa9.38□□□□□ -0.91
FARP1-241ENST00000602272 SCNN1AP37088 669 aa9.38□□□□□ -0.91
FARP1-241ENST00000602272 TXLNAP40222 546 aa9.38□□□□□ -0.91
FARP1-241ENST00000602272 PCBP4P57723 403 aaKnown RBP9.38□□□□□ -0.91
FARP1-241ENST00000602272 NUTM2GQ5VZR2 741 aa9.38□□□□□ -0.91
FARP1-241ENST00000602272 USP31Q70CQ4 1352 aa9.37□□□□□ -0.91
FARP1-241ENST00000602272 TNKS1BP1Q9C0C2 1729 aaKnown RBP9.37□□□□□ -0.91
FARP1-241ENST00000602272 NWD2Q9ULI1 1742 aa9.37□□□□□ -0.91
FARP1-241ENST00000602272 ANKRD26Q9UPS8 1709 aa9.37□□□□□ -0.91
FARP1-241ENST00000602272 ELOA3CA0A087WX78 387 aaPredicted RBP9.37□□□□□ -0.91
FARP1-241ENST00000602272 ELOA3DA6NLF2 546 aaPredicted RBP9.37□□□□□ -0.91
FARP1-241ENST00000602272 C1QTNF9BB2RNN3 333 aa9.37□□□□□ -0.91
FARP1-241ENST00000602272 ELOA3BQ3SY89 546 aa9.37□□□□□ -0.91
FARP1-241ENST00000602272 MEX3CQ5U5Q3 659 aaKnown RBP9.37□□□□□ -0.91
FARP1-241ENST00000602272 CAPN12Q6ZSI9 719 aa9.37□□□□□ -0.91
FARP1-241ENST00000602272 NLRP13Q86W25 1043 aa9.37□□□□□ -0.91
FARP1-241ENST00000602272 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.37□□□□□ -0.91
FARP1-241ENST00000602272 ELOA3Q8NG57 546 aa9.37□□□□□ -0.91
FARP1-241ENST00000602272 HCN2Q9UL51 889 aa9.37□□□□□ -0.91
FARP1-241ENST00000602272 OVOS2A0A0J9YW53 1432 aa9.37□□□□□ -0.91
FARP1-241ENST00000602272 OVOS2Q6IE36 1432 aa9.37□□□□□ -0.91
FARP1-241ENST00000602272 NSD3Q9BZ95 1437 aa9.37□□□□□ -0.91
FARP1-241ENST00000602272 NRAPQ86VF7 1730 aa9.36□□□□□ -0.91
FARP1-241ENST00000602272 NFAT5O94916 1531 aa9.36□□□□□ -0.91
FARP1-241ENST00000602272 WASHC2AQ641Q2 1341 aa9.36□□□□□ -0.91
FARP1-241ENST00000602272 BRD1O95696 1058 aa9.36□□□□□ -0.91
FARP1-241ENST00000602272 B4GALNT3Q6L9W6 998 aa9.36□□□□□ -0.91
FARP1-241ENST00000602272 CD163Q86VB7 1156 aa9.36□□□□□ -0.91
FARP1-241ENST00000602272 NME9Q86XW9 330 aa9.36□□□□□ -0.91
FARP1-241ENST00000602272 MKNK1Q9BUB5 465 aa9.36□□□□□ -0.91
FARP1-241ENST00000602272 SLIT2O94813 1529 aa9.36□□□□□ -0.91
FARP1-241ENST00000602272 LMO7Q8WWI1 1683 aa9.36□□□□□ -0.91
FARP1-241ENST00000602272 SIN3BO75182 1162 aa9.35□□□□□ -0.91
FARP1-241ENST00000602272 C1orf53Q5VUE5 145 aa9.35□□□□□ -0.91
FARP1-241ENST00000602272 LRRC69Q6ZNQ3 347 aa9.35□□□□□ -0.91
FARP1-241ENST00000602272 COL26A1Q96A83 441 aa9.35□□□□□ -0.91
FARP1-241ENST00000602272 C8orf37Q96NL8 207 aa9.35□□□□□ -0.91
FARP1-241ENST00000602272 ANKIB1Q9P2G1 1089 aa9.35□□□□□ -0.91
FARP1-241ENST00000602272 HCN4Q9Y3Q4 1203 aa9.35□□□□□ -0.91
FARP1-241ENST00000602272 CPDO75976 1380 aa9.35□□□□□ -0.91
FARP1-241ENST00000602272 LTN1O94822 1766 aa9.35□□□□□ -0.91
FARP1-241ENST00000602272 GCP02774 474 aa9.34□□□□□ -0.91
FARP1-241ENST00000602272 FURINP09958 794 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms