RNA–Protein interactions for RNA: ENST00000602263.5

FARP1-240, Transcript of FERM, ARH/RhoGEF and pleckstrin domain protein 1, humanhuman

TSL 5

Gene FARP1, Length 867 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FARP1-240ENST00000602263 AOX1Q06278 1338 aa13.13□□□□□ -0.31
FARP1-240ENST00000602263 DZIP1LQ8IYY4 767 aaKnown RBP13.13□□□□□ -0.31
FARP1-240ENST00000602263 TDRD3Q9H7E2 651 aaKnown RBP13.13□□□□□ -0.31
FARP1-240ENST00000602263 IQSEC3Q9UPP2 1182 aaPredicted RBP13.13□□□□□ -0.31
FARP1-240ENST00000602263 KIAA0100Q14667 2235 aaKnown RBP13.13□□□□□ -0.31
FARP1-240ENST00000602263 USP2O75604 605 aaPredicted RBP13.12□□□□□ -0.31
FARP1-240ENST00000602263 PDE8BO95263 885 aa13.12□□□□□ -0.31
FARP1-240ENST00000602263 LRRC24Q50LG9 513 aa13.12□□□□□ -0.31
FARP1-240ENST00000602263 FBXO33Q7Z6M2 555 aa13.12□□□□□ -0.31
FARP1-240ENST00000602263 ANKRD44Q8N8A2 993 aa13.12□□□□□ -0.31
FARP1-240ENST00000602263 SSH1Q8WYL5 1049 aa13.12□□□□□ -0.31
FARP1-240ENST00000602263 R3HDMLQ9H3Y0 253 aa13.12□□□□□ -0.31
FARP1-240ENST00000602263 TMOD2Q9NZR1 351 aa13.12□□□□□ -0.31
FARP1-240ENST00000602263 MAST3O60307 1309 aa13.12□□□□□ -0.31
FARP1-240ENST00000602263 TCP10L2B9ZVM9 353 aa13.11□□□□□ -0.31
FARP1-240ENST00000602263 IGF2BP3O00425 579 aaKnown RBP eCLIP13.11□□□□□ -0.31
FARP1-240ENST00000602263 IFIT1P09914 478 aaKnown RBP13.11□□□□□ -0.31
FARP1-240ENST00000602263 HDLBPQ00341 1268 aaKnown RBP13.11□□□□□ -0.31
FARP1-240ENST00000602263 PUM3Q15397 648 aaKnown RBP13.11□□□□□ -0.31
FARP1-240ENST00000602263 TEKT1Q969V4 418 aa13.11□□□□□ -0.31
FARP1-240ENST00000602263 ERO1AQ96HE7 468 aa13.11□□□□□ -0.31
FARP1-240ENST00000602263 ELP3Q9H9T3 547 aa13.11□□□□□ -0.31
FARP1-240ENST00000602263 TRIM17Q9Y577 477 aa13.11□□□□□ -0.31
FARP1-240ENST00000602263 HTTP42858 3142 aa13.11□□□□□ -0.31
FARP1-240ENST00000602263 CENPFP49454 3210 aa13.11□□□□□ -0.31
FARP1-240ENST00000602263 SLC34A2O95436 690 aa13.1□□□□□ -0.31
FARP1-240ENST00000602263 OPTNQ96CV9 577 aa13.1□□□□□ -0.31
FARP1-240ENST00000602263 TMEM39BQ9GZU3 492 aa13.1□□□□□ -0.31
FARP1-240ENST00000602263 SMC4Q9NTJ3 1288 aa13.1□□□□□ -0.31
FARP1-240ENST00000602263 CSADQ9Y600 493 aa13.1□□□□□ -0.31
FARP1-240ENST00000602263 KIF16BQ96L93 1317 aa13.1□□□□□ -0.31
FARP1-240ENST00000602263 SLC5A1P13866 664 aa13.09□□□□□ -0.31
FARP1-240ENST00000602263 GJA5P36382 358 aa13.09□□□□□ -0.31
FARP1-240ENST00000602263 CRHR2Q13324 411 aa13.09□□□□□ -0.31
FARP1-240ENST00000602263 ALDH1L2Q3SY69 923 aa13.09□□□□□ -0.31
FARP1-240ENST00000602263 VGLL2Q8N8G2 317 aa13.09□□□□□ -0.31
FARP1-240ENST00000602263 KLHDC4Q8TBB5 520 aa13.09□□□□□ -0.31
FARP1-240ENST00000602263 HOOK2Q96ED9 719 aa13.09□□□□□ -0.31
FARP1-240ENST00000602263 USP44Q9H0E7 712 aa13.09□□□□□ -0.31
FARP1-240ENST00000602263 SUGT1Q9Y2Z0 365 aa13.09□□□□□ -0.31
FARP1-240ENST00000602263 RBBP6Q7Z6E9 1792 aaKnown RBP13.08□□□□□ -0.32
FARP1-240ENST00000602263 TESPA1A2RU30 521 aaPredicted RBP13.08□□□□□ -0.32
FARP1-240ENST00000602263 EYA2O00167 538 aa13.08□□□□□ -0.32
FARP1-240ENST00000602263 BCAMP50895 628 aa13.08□□□□□ -0.32
FARP1-240ENST00000602263 MAP3K9P80192 1104 aa13.08□□□□□ -0.32
FARP1-240ENST00000602263 SLFN5Q08AF3 891 aa13.08□□□□□ -0.32
FARP1-240ENST00000602263 ZDHHC15Q96MV8 337 aa13.08□□□□□ -0.32
FARP1-240ENST00000602263 TEPSINQ96N21 525 aa13.08□□□□□ -0.32
FARP1-240ENST00000602263 WDHD1O75717 1129 aaPredicted RBP13.07□□□□□ -0.32
FARP1-240ENST00000602263 UBTFL1P0CB47 393 aaPredicted RBP13.07□□□□□ -0.32
FARP1-240ENST00000602263 GTF2A2P52657 109 aa13.07□□□□□ -0.32
FARP1-240ENST00000602263 CACNB3P54284 484 aa13.07□□□□□ -0.32
FARP1-240ENST00000602263 VGLL4Q14135 290 aa13.07□□□□□ -0.32
FARP1-240ENST00000602263 GRIK5Q16478 980 aa13.07□□□□□ -0.32
FARP1-240ENST00000602263 PRPF38BQ5VTL8 546 aaKnown RBP13.07□□□□□ -0.32
FARP1-240ENST00000602263 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.07□□□□□ -0.32
FARP1-240ENST00000602263 OTOP1Q7RTM1 612 aa13.07□□□□□ -0.32
FARP1-240ENST00000602263 FAM83AQ86UY5 434 aa13.07□□□□□ -0.32
FARP1-240ENST00000602263 CDAN1Q8IWY9 1227 aa13.07□□□□□ -0.32
FARP1-240ENST00000602263 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.07□□□□□ -0.32
FARP1-240ENST00000602263 WDR66Q8TBY9 1149 aa13.07□□□□□ -0.32
FARP1-240ENST00000602263 LPIN2Q92539 896 aa13.07□□□□□ -0.32
FARP1-240ENST00000602263 MRIQ9BWK5 157 aa13.07□□□□□ -0.32
FARP1-240ENST00000602263 HDAC5Q9UQL6 1122 aa13.07□□□□□ -0.32
FARP1-240ENST00000602263 CCL15-CCL14A0A0B4J2E2 113 aa13.06□□□□□ -0.32
FARP1-240ENST00000602263 FGFR2P21802 821 aa13.06□□□□□ -0.32
FARP1-240ENST00000602263 SP3Q02447 781 aa13.06□□□□□ -0.32
FARP1-240ENST00000602263 ARHGEF6Q15052 776 aa13.06□□□□□ -0.32
FARP1-240ENST00000602263 TAF1CQ15572 869 aaPredicted RBP13.06□□□□□ -0.32
FARP1-240ENST00000602263 CCL15Q16663 113 aa13.06□□□□□ -0.32
FARP1-240ENST00000602263 FKBP1CQ5VVH2 108 aa13.06□□□□□ -0.32
FARP1-240ENST00000602263 DCAF15Q66K64 600 aa13.06□□□□□ -0.32
FARP1-240ENST00000602263 INTS3Q68E01 1043 aaKnown RBP13.06□□□□□ -0.32
FARP1-240ENST00000602263 HHIPL2Q6UWX4 724 aa13.06□□□□□ -0.32
FARP1-240ENST00000602263 CD99L2Q8TCZ2 262 aa13.06□□□□□ -0.32
FARP1-240ENST00000602263 OTUD5Q96G74 571 aa13.06□□□□□ -0.32
FARP1-240ENST00000602263 PTPN18Q99952 460 aa13.06□□□□□ -0.32
FARP1-240ENST00000602263 EFCC1Q9HA90 598 aa13.06□□□□□ -0.32
FARP1-240ENST00000602263 GNL3LQ9NVN8 582 aaKnown RBP13.06□□□□□ -0.32
FARP1-240ENST00000602263 RPAP1Q9BWH6 1393 aaPredicted RBP13.06□□□□□ -0.32
FARP1-240ENST00000602263 MYH2Q9UKX2 1941 aa13.05□□□□□ -0.32
FARP1-240ENST00000602263 RFX5P48382 616 aaPredicted RBP13.05□□□□□ -0.32
FARP1-240ENST00000602263 CNKSR2Q8WXI2 1034 aa13.05□□□□□ -0.32
FARP1-240ENST00000602263 BRI3BPQ8WY22 251 aa13.05□□□□□ -0.32
FARP1-240ENST00000602263 MS4A4AQ96JQ5 239 aa13.05□□□□□ -0.32
FARP1-240ENST00000602263 WRNIP1Q96S55 665 aa13.05□□□□□ -0.32
FARP1-240ENST00000602263 ZFYVE28Q9HCC9 887 aa13.05□□□□□ -0.32
FARP1-240ENST00000602263 FBXO3Q9UK99 471 aa13.05□□□□□ -0.32
FARP1-240ENST00000602263 MKI67P46013 3256 aaKnown RBP13.04□□□□□ -0.32
FARP1-240ENST00000602263 SPDYE5A6NIY4 337 aa13.04□□□□□ -0.32
FARP1-240ENST00000602263 CIAO1O76071 339 aa13.04□□□□□ -0.32
FARP1-240ENST00000602263 CT47B1P0C2W7 299 aaPredicted RBP13.04□□□□□ -0.32
FARP1-240ENST00000602263 CETPP11597 493 aa13.04□□□□□ -0.32
FARP1-240ENST00000602263 ATP2B3Q16720 1220 aa13.04□□□□□ -0.32
FARP1-240ENST00000602263 APOBEC3HQ6NTF7 200 aaKnown RBP13.04□□□□□ -0.32
FARP1-240ENST00000602263 ERO1BQ86YB8 467 aa13.04□□□□□ -0.32
FARP1-240ENST00000602263 CDCA7LQ96GN5 454 aa13.04□□□□□ -0.32
FARP1-240ENST00000602263 API5Q9BZZ5 524 aaKnown RBP13.04□□□□□ -0.32
FARP1-240ENST00000602263 SIL1Q9H173 461 aa13.04□□□□□ -0.32
FARP1-240ENST00000602263 CEP126Q9P2H0 1117 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms